RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 SLC4A4Q9Y6R1 1079 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 XDHP47989 1333 aa6.09□□□□□ -1.43
ATG4A-204ENST00000372246 MYH8P13535 1937 aa6.09□□□□□ -1.44
ATG4A-204ENST00000372246 DIP2AQ14689 1571 aa6.09□□□□□ -1.44
ATG4A-204ENST00000372246 MED1Q15648 1581 aaPredicted RBP6.09□□□□□ -1.44
ATG4A-204ENST00000372246 KDM3BQ7LBC6 1761 aa6.09□□□□□ -1.44
ATG4A-204ENST00000372246 SKAP2O75563 359 aaPredicted RBP6.08□□□□□ -1.44
ATG4A-204ENST00000372246 PLEKHA8P1O95397 391 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 CDC25CP30307 473 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 IL17AQ16552 155 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 CDKAL1Q5VV42 579 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 NFRKBQ6P4R8 1299 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 MMS22LQ6ZRQ5 1243 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 TRAPPC11Q7Z392 1133 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 RASGRP4Q8TDF6 673 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 APPBP2Q92624 585 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 UIMC1Q96RL1 719 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 MYCBPQ99417 103 aaPredicted RBP6.08□□□□□ -1.44
ATG4A-204ENST00000372246 CRACR2AQ9BSW2 395 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 CXorf56Q9H5V9 222 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 LRRC4CQ9HCJ2 640 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.08□□□□□ -1.44
ATG4A-204ENST00000372246 CAPN6Q9Y6Q1 641 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 CACNA1FO60840 1977 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 MRC1P22897 1456 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 GOLGA6BA6NDN3 693 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 EIF4E1BA6NMX2 242 aaKnown RBP6.08□□□□□ -1.44
ATG4A-204ENST00000372246 B4DLN1 442 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 KCNJ18B7U540 433 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 H7C1W4 665 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 ZNF263O14978 683 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 NMT2O60551 498 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 RPS6KA5O75582 802 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 MBD4O95243 580 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 MOCS3O95396 460 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 CSB-PGBD3P0DP91 1061 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 TATP17735 454 aaPredicted RBP6.08□□□□□ -1.44
ATG4A-204ENST00000372246 MCM7P33993 719 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 IL15P40933 162 aaPredicted RBP6.08□□□□□ -1.44
ATG4A-204ENST00000372246 PRCPP42785 496 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 GUCY2FP51841 1108 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 COPB1P53618 953 aaKnown RBP6.08□□□□□ -1.44
ATG4A-204ENST00000372246 KCNJ12Q14500 433 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 MCTP2Q6DN12 878 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 IRF2BP1Q8IU81 584 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 OR2W6PQ8NHA6 318 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 FAM76AQ8TAV0 307 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 SDR42E1Q8WUS8 393 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 CAPS2Q9BXY5 557 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 STRN4Q9NRL3 753 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 WBP1LQ9NX94 342 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 SALL4Q9UJQ4 1053 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 PACSIN2Q9UNF0 486 aaPredicted RBP6.08□□□□□ -1.44
ATG4A-204ENST00000372246 SAR1BQ9Y6B6 198 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 SPATA31A3Q5VYP0 1347 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 CPDO75976 1380 aa6.08□□□□□ -1.44
ATG4A-204ENST00000372246 FAM237AA0A1B0GTK4 181 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 RASSF10A6NK89 507 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 MINDY4BA8MYZ0 360 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 EPHB6O15197 1021 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 SNRPA1P09661 255 aaKnown RBP6.07□□□□□ -1.44
ATG4A-204ENST00000372246 PDHBP11177 359 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 IDEP14735 1019 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 PHKG2P15735 406 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 ENOX2Q16206 610 aaKnown RBP6.07□□□□□ -1.44
ATG4A-204ENST00000372246 CCDC57Q2TAC2 916 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 AMOTQ4VCS5 1084 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 RNF187Q5TA31 235 aaPredicted RBP6.07□□□□□ -1.44
ATG4A-204ENST00000372246 CCNI2Q6ZMN8 369 aaPredicted RBP6.07□□□□□ -1.44
ATG4A-204ENST00000372246 KIAA1328Q86T90 577 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 ANKRD18AQ8IVF6 992 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 EFCAB13Q8IY85 973 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 CCDC155Q8N6L0 562 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 NELFBQ8WX92 580 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 RAPGEF4Q8WZA2 1011 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 CWC25Q9NXE8 425 aaPredicted RBP6.07□□□□□ -1.44
ATG4A-204ENST00000372246 LRWD1Q9UFC0 647 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 EID1Q9Y6B2 187 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 V9GY48 417 aaPredicted RBP6.07□□□□□ -1.44
ATG4A-204ENST00000372246 C5P01031 1676 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 MARF1Q9Y4F3 1742 aaKnown RBP6.07□□□□□ -1.44
ATG4A-204ENST00000372246 A0A087WUV0 522 aaPredicted RBP6.07□□□□□ -1.44
ATG4A-204ENST00000372246 OPLAHO14841 1288 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 GPR37O15354 613 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 BUB1O43683 1085 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 INPP5BP32019 993 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 WHAMMP3Q1A5X7 153 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 TCP11X2Q5H9J9 407 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 METTL24Q5JXM2 366 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 NT5DC1Q5TFE4 455 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 CYP26C1Q6V0L0 522 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 SAMD7Q7Z3H4 446 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 MAGEB6Q8N7X4 407 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 PLBD2Q8NHP8 589 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 LRRC15Q8TF66 581 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 IFT81Q8WYA0 676 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 LRCH3Q96II8 777 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 GOLPH3Q9H4A6 298 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 GREM2Q9H772 168 aa6.07□□□□□ -1.44
ATG4A-204ENST00000372246 KANSL2Q9H9L4 492 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms