RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 ASCC2Q9H1I8 757 aaPredicted RBP18.3■□□□□ 0.52
TMEM53-204ENST00000372243 BARHL2Q9NY43 387 aa18.3■□□□□ 0.52
TMEM53-204ENST00000372243 A0A0G2JMZ2 1700 aa18.29■□□□□ 0.52
TMEM53-204ENST00000372243 VWA5AO00534 786 aa18.29■□□□□ 0.52
TMEM53-204ENST00000372243 ZBED4O75132 1171 aa18.29■□□□□ 0.52
TMEM53-204ENST00000372243 SREBF2Q12772 1141 aa18.29■□□□□ 0.52
TMEM53-204ENST00000372243 NOGQ13253 232 aa18.29■□□□□ 0.52
TMEM53-204ENST00000372243 PIBF1Q8WXW3 757 aa18.29■□□□□ 0.52
TMEM53-204ENST00000372243 AIFM3Q96NN9 605 aa18.29■□□□□ 0.52
TMEM53-204ENST00000372243 AMNQ9BXJ7 453 aa18.29■□□□□ 0.52
TMEM53-204ENST00000372243 SYT1P21579 422 aa18.28■□□□□ 0.52
TMEM53-204ENST00000372243 OAZ1P54368 228 aa18.28■□□□□ 0.52
TMEM53-204ENST00000372243 WWC2Q6AWC2 1192 aa18.28■□□□□ 0.52
TMEM53-204ENST00000372243 CYP4F22Q6NT55 531 aa18.28■□□□□ 0.52
TMEM53-204ENST00000372243 MB21D1Q8N884 522 aa18.28■□□□□ 0.52
TMEM53-204ENST00000372243 FBXO18Q8NFZ0 1043 aa18.28■□□□□ 0.52
TMEM53-204ENST00000372243 GTF3C2Q8WUA4 911 aaPredicted RBP18.28■□□□□ 0.52
TMEM53-204ENST00000372243 ATG4CQ96DT6 458 aa18.28■□□□□ 0.52
TMEM53-204ENST00000372243 C8orf76Q96K31 380 aa18.28■□□□□ 0.52
TMEM53-204ENST00000372243 PTPN18Q99952 460 aa18.28■□□□□ 0.52
TMEM53-204ENST00000372243 CIZ1Q9ULV3 898 aaPredicted RBP18.28■□□□□ 0.52
TMEM53-204ENST00000372243 PDHXO00330 501 aa18.27■□□□□ 0.52
TMEM53-204ENST00000372243 ATP2A1O14983 1001 aa18.27■□□□□ 0.52
TMEM53-204ENST00000372243 PPP1R11O60927 126 aaPredicted RBP18.27■□□□□ 0.52
TMEM53-204ENST00000372243 HERVK_113P62684 666 aa18.27■□□□□ 0.52
TMEM53-204ENST00000372243 TRIM29Q14134 588 aa18.27■□□□□ 0.52
TMEM53-204ENST00000372243 PPP1R18Q6NYC8 613 aa18.27■□□□□ 0.52
TMEM53-204ENST00000372243 FBXO11Q86XK2 927 aa18.27■□□□□ 0.52
TMEM53-204ENST00000372243 REM2Q8IYK8 340 aaPredicted RBP18.27■□□□□ 0.52
TMEM53-204ENST00000372243 REPS2Q8NFH8 660 aa18.27■□□□□ 0.52
TMEM53-204ENST00000372243 CCDC148Q8NFR7 591 aa18.27■□□□□ 0.52
TMEM53-204ENST00000372243 CCDC12Q8WUD4 166 aaPredicted RBP18.27■□□□□ 0.52
TMEM53-204ENST00000372243 P2RX7Q99572 595 aaKnown RBP18.27■□□□□ 0.52
TMEM53-204ENST00000372243 ZNF536O15090 1300 aa18.27■□□□□ 0.51
TMEM53-204ENST00000372243 STXBP3O00186 592 aa18.26■□□□□ 0.51
TMEM53-204ENST00000372243 ICAM1P05362 532 aa18.26■□□□□ 0.51
TMEM53-204ENST00000372243 TM4SF4P48230 202 aa18.26■□□□□ 0.51
TMEM53-204ENST00000372243 SAMD1Q6SPF0 538 aaPredicted RBP18.26■□□□□ 0.51
TMEM53-204ENST00000372243 PAXIP1Q6ZW49 1069 aaPredicted RBP18.26■□□□□ 0.51
TMEM53-204ENST00000372243 HEATR3Q7Z4Q2 680 aa18.26■□□□□ 0.51
TMEM53-204ENST00000372243 FAM43AQ8N2R8 423 aa18.26■□□□□ 0.51
TMEM53-204ENST00000372243 CTDP1Q9Y5B0 961 aaPredicted RBP18.26■□□□□ 0.51
TMEM53-204ENST00000372243 COL11A1P12107 1806 aaPredicted RBP18.26■□□□□ 0.51
TMEM53-204ENST00000372243 ESYT2A0FGR8 921 aa18.25■□□□□ 0.51
TMEM53-204ENST00000372243 STX6O43752 255 aa18.25■□□□□ 0.51
TMEM53-204ENST00000372243 SNAP25P60880 206 aa18.25■□□□□ 0.51
TMEM53-204ENST00000372243 OTUD7BQ6GQQ9 843 aa18.25■□□□□ 0.51
TMEM53-204ENST00000372243 GPKOWQ92917 476 aaPredicted RBP eCLIP18.25■□□□□ 0.51
TMEM53-204ENST00000372243 CAPNS2Q96L46 248 aa18.25■□□□□ 0.51
TMEM53-204ENST00000372243 PHF20Q9BVI0 1012 aa18.25■□□□□ 0.51
TMEM53-204ENST00000372243 VPS54Q9P1Q0 977 aa18.25■□□□□ 0.51
TMEM53-204ENST00000372243 ZNF214Q9UL59 606 aaPredicted RBP18.25■□□□□ 0.51
TMEM53-204ENST00000372243 PCDHA1Q9Y5I3 950 aa18.25■□□□□ 0.51
TMEM53-204ENST00000372243 H3BQV1 296 aa18.25■□□□□ 0.51
TMEM53-204ENST00000372243 NAPAP54920 295 aa18.25■□□□□ 0.51
TMEM53-204ENST00000372243 NUCB2P80303 420 aa18.25■□□□□ 0.51
TMEM53-204ENST00000372243 KIF23Q02241 960 aaPredicted RBP18.25■□□□□ 0.51
TMEM53-204ENST00000372243 IFFO2Q5TF58 517 aa18.25■□□□□ 0.51
TMEM53-204ENST00000372243 KRT40Q6A162 431 aa18.25■□□□□ 0.51
TMEM53-204ENST00000372243 GALNT17Q6IS24 598 aa18.25■□□□□ 0.51
TMEM53-204ENST00000372243 TYW1BQ6NUM6 668 aa18.25■□□□□ 0.51
TMEM53-204ENST00000372243 CCDC174Q6PII3 467 aa18.25■□□□□ 0.51
TMEM53-204ENST00000372243 IFNL1Q8IU54 200 aa18.25■□□□□ 0.51
TMEM53-204ENST00000372243 TEX2Q8IWB9 1127 aa18.25■□□□□ 0.51
TMEM53-204ENST00000372243 COA7Q96BR5 231 aa18.25■□□□□ 0.51
TMEM53-204ENST00000372243 SHISA4Q96DD7 197 aa18.25■□□□□ 0.51
TMEM53-204ENST00000372243 PARK7Q99497 189 aaKnown RBP18.25■□□□□ 0.51
TMEM53-204ENST00000372243 ZMYND12Q9H0C1 365 aa18.25■□□□□ 0.51
TMEM53-204ENST00000372243 IGF2BP3O00425 579 aaKnown RBP eCLIP18.24■□□□□ 0.51
TMEM53-204ENST00000372243 MMP1P03956 469 aa18.24■□□□□ 0.51
TMEM53-204ENST00000372243 GJB4Q9NTQ9 266 aa18.24■□□□□ 0.51
TMEM53-204ENST00000372243 RABGAP1Q9Y3P9 1069 aa18.24■□□□□ 0.51
TMEM53-204ENST00000372243 ABCB11O95342 1321 aa18.24■□□□□ 0.51
TMEM53-204ENST00000372243 CALML3P27482 149 aa18.23■□□□□ 0.51
TMEM53-204ENST00000372243 GCLCP48506 637 aaPredicted RBP18.23■□□□□ 0.51
TMEM53-204ENST00000372243 TMEM132BQ14DG7 1078 aa18.23■□□□□ 0.51
TMEM53-204ENST00000372243 POTEEQ6S8J3 1075 aa18.23■□□□□ 0.51
TMEM53-204ENST00000372243 TEX13BQ9BXU2 312 aa18.23■□□□□ 0.51
TMEM53-204ENST00000372243 GLT8D2Q9H1C3 349 aa18.23■□□□□ 0.51
TMEM53-204ENST00000372243 RAVER2Q9HCJ3 691 aaKnown RBP18.23■□□□□ 0.51
TMEM53-204ENST00000372243 CHMP5Q9NZZ3 219 aa18.23■□□□□ 0.51
TMEM53-204ENST00000372243 CCPG1Q9ULG6 757 aa18.23■□□□□ 0.51
TMEM53-204ENST00000372243 MTMR6Q9Y217 621 aa18.23■□□□□ 0.51
TMEM53-204ENST00000372243 WDR33Q9C0J8 1336 aaKnown RBP18.23■□□□□ 0.51
TMEM53-204ENST00000372243 CYP2C8P10632 490 aa18.22■□□□□ 0.51
TMEM53-204ENST00000372243 GNA11P29992 359 aa18.22■□□□□ 0.51
TMEM53-204ENST00000372243 MAP2K2P36507 400 aa18.22■□□□□ 0.51
TMEM53-204ENST00000372243 NLRP5P59047 1200 aa18.22■□□□□ 0.51
TMEM53-204ENST00000372243 TKFCQ3LXA3 575 aa18.22■□□□□ 0.51
TMEM53-204ENST00000372243 USH1GQ495M9 461 aa18.22■□□□□ 0.51
TMEM53-204ENST00000372243 CPXCR1Q8N123 301 aa18.22■□□□□ 0.51
TMEM53-204ENST00000372243 DAGLBQ8NCG7 672 aa18.22■□□□□ 0.51
TMEM53-204ENST00000372243 SMCR8Q8TEV9 937 aaPredicted RBP18.22■□□□□ 0.51
TMEM53-204ENST00000372243 AGBL1Q96MI9 1066 aa18.22■□□□□ 0.51
TMEM53-204ENST00000372243 MAF1Q9H063 256 aa18.22■□□□□ 0.51
TMEM53-204ENST00000372243 C6orf50Q9HD87 102 aa18.22■□□□□ 0.51
TMEM53-204ENST00000372243 RBPJLQ9UBG7 517 aa18.22■□□□□ 0.51
TMEM53-204ENST00000372243 KCNJ14Q9UNX9 436 aa18.22■□□□□ 0.51
TMEM53-204ENST00000372243 MRPL11Q9Y3B7 192 aaKnown RBP18.22■□□□□ 0.51
TMEM53-204ENST00000372243 VPS37CA5D8V6 355 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms