RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 LRRC10BA6NIK2 292 aa32.63■■■□□ 2.81
SSBP3-204ENST00000371320 OR52Z1P0C646 297 aa32.63■■■□□ 2.81
SSBP3-204ENST00000371320 CCT6AP40227 531 aaKnown RBP32.63■■■□□ 2.81
SSBP3-204ENST00000371320 PRCPP42785 496 aa32.63■■■□□ 2.81
SSBP3-204ENST00000371320 ANKRD20A12PQ8NF67 263 aa32.63■■■□□ 2.81
SSBP3-204ENST00000371320 CPLX3Q8WVH0 158 aa32.63■■■□□ 2.81
SSBP3-204ENST00000371320 PLIN2Q99541 437 aa32.63■■■□□ 2.81
SSBP3-204ENST00000371320 UBA5Q9GZZ9 404 aa32.63■■■□□ 2.81
SSBP3-204ENST00000371320 MAPK8IP1Q9UQF2 711 aa32.63■■■□□ 2.81
SSBP3-204ENST00000371320 F8W031 263 aaPredicted RBP32.62■■■□□ 2.81
SSBP3-204ENST00000371320 MYL1P05976 194 aa32.62■■■□□ 2.81
SSBP3-204ENST00000371320 AK8Q96MA6 479 aa32.62■■■□□ 2.81
SSBP3-204ENST00000371320 MTMR4Q9NYA4 1195 aa32.62■■■□□ 2.81
SSBP3-204ENST00000371320 N4BP3O15049 544 aa32.62■■■□□ 2.81
SSBP3-204ENST00000371320 ELF2Q15723 593 aa32.62■■■□□ 2.81
SSBP3-204ENST00000371320 NAA15Q9BXJ9 866 aaKnown RBP32.62■■■□□ 2.81
SSBP3-204ENST00000371320 KCNB1Q14721 858 aa32.61■■■□□ 2.81
SSBP3-204ENST00000371320 NEK8Q86SG6 692 aa32.61■■■□□ 2.81
SSBP3-204ENST00000371320 ZC3H12CQ9C0D7 883 aaKnown RBP32.61■■■□□ 2.81
SSBP3-204ENST00000371320 RIOX1Q9H6W3 641 aa32.61■■■□□ 2.81
SSBP3-204ENST00000371320 KBTBD4Q9NVX7 518 aa32.61■■■□□ 2.81
SSBP3-204ENST00000371320 ITIH6Q6UXX5 1313 aa32.61■■■□□ 2.81
SSBP3-204ENST00000371320 PLIN4Q96Q06 1357 aa32.61■■■□□ 2.81
SSBP3-204ENST00000371320 LTBP1Q14766 1721 aa32.6■■■□□ 2.81
SSBP3-204ENST00000371320 PDHBP11177 359 aa32.6■■■□□ 2.81
SSBP3-204ENST00000371320 GABPAQ06546 454 aa32.6■■■□□ 2.81
SSBP3-204ENST00000371320 TCP11X2Q5H9J9 407 aa32.6■■■□□ 2.81
SSBP3-204ENST00000371320 CABP7Q86V35 215 aa32.6■■■□□ 2.81
SSBP3-204ENST00000371320 ADSSL1Q8N142 457 aa32.6■■■□□ 2.81
SSBP3-204ENST00000371320 LRRC37AA6NMS7 1700 aa32.6■■■□□ 2.81
SSBP3-204ENST00000371320 KCNJ18B7U540 433 aa32.59■■■□□ 2.81
SSBP3-204ENST00000371320 MFAP3LO75121 409 aa32.59■■■□□ 2.81
SSBP3-204ENST00000371320 COPB1P53618 953 aaKnown RBP32.59■■■□□ 2.81
SSBP3-204ENST00000371320 KCNJ12Q14500 433 aa32.59■■■□□ 2.81
SSBP3-204ENST00000371320 KMT5BQ4FZB7 885 aa32.59■■■□□ 2.81
SSBP3-204ENST00000371320 FRMPD2Q68DX3 1309 aaPredicted RBP32.59■■■□□ 2.81
SSBP3-204ENST00000371320 KRT27Q7Z3Y8 459 aa32.59■■■□□ 2.81
SSBP3-204ENST00000371320 REXO1Q8N1G1 1221 aaKnown RBP32.59■■■□□ 2.81
SSBP3-204ENST00000371320 DESI2Q9BSY9 194 aa32.59■■■□□ 2.81
SSBP3-204ENST00000371320 VPS16Q9H269 839 aa32.59■■■□□ 2.81
SSBP3-204ENST00000371320 CUEDC2Q9H467 287 aa32.59■■■□□ 2.81
SSBP3-204ENST00000371320 H7C1D1 291 aa32.58■■■□□ 2.81
SSBP3-204ENST00000371320 TPM1P09493 284 aa32.58■■■□□ 2.81
SSBP3-204ENST00000371320 CNGA4Q8IV77 575 aa32.58■■■□□ 2.81
SSBP3-204ENST00000371320 ZNF397Q8NF99 534 aaPredicted RBP32.58■■■□□ 2.81
SSBP3-204ENST00000371320 TTF2Q9UNY4 1162 aaKnown RBP32.58■■■□□ 2.81
SSBP3-204ENST00000371320 ESYT2A0FGR8 921 aa32.58■■■□□ 2.81
SSBP3-204ENST00000371320 SOWAHDA6NJG2 315 aa32.58■■■□□ 2.81
SSBP3-204ENST00000371320 FANCGO15287 622 aa32.58■■■□□ 2.81
SSBP3-204ENST00000371320 URI1O94763 535 aaPredicted RBP32.58■■■□□ 2.81
SSBP3-204ENST00000371320 AKR1B1P15121 316 aa32.58■■■□□ 2.81
SSBP3-204ENST00000371320 CASP14P31944 242 aa32.58■■■□□ 2.81
SSBP3-204ENST00000371320 MTF1Q14872 753 aa32.58■■■□□ 2.81
SSBP3-204ENST00000371320 TXNRD1Q16881 649 aa32.58■■■□□ 2.81
SSBP3-204ENST00000371320 CREBRFQ8IUR6 639 aa32.58■■■□□ 2.81
SSBP3-204ENST00000371320 CERS5Q8N5B7 392 aa32.58■■■□□ 2.81
SSBP3-204ENST00000371320 TBCKQ8TEA7 893 aa32.58■■■□□ 2.81
SSBP3-204ENST00000371320 MAGEF1Q9HAY2 307 aa32.58■■■□□ 2.81
SSBP3-204ENST00000371320 BIN2Q9UBW5 565 aaPredicted RBP32.58■■■□□ 2.81
SSBP3-204ENST00000371320 hCG_1984214I3L0E3 225 aa32.57■■■□□ 2.8
SSBP3-204ENST00000371320 KLRC4O43908 158 aa32.57■■■□□ 2.8
SSBP3-204ENST00000371320 GNG11P61952 73 aa32.57■■■□□ 2.8
SSBP3-204ENST00000371320 SEMA3FQ13275 785 aa32.57■■■□□ 2.8
SSBP3-204ENST00000371320 ASPRV1Q53RT3 343 aa32.57■■■□□ 2.8
SSBP3-204ENST00000371320 DPP8Q6V1X1 898 aaPredicted RBP32.57■■■□□ 2.8
SSBP3-204ENST00000371320 ZNF713Q8N859 430 aaPredicted RBP32.57■■■□□ 2.8
SSBP3-204ENST00000371320 FEZ1Q99689 392 aa32.57■■■□□ 2.8
SSBP3-204ENST00000371320 DDX4Q9NQI0 724 aaKnown RBP32.57■■■□□ 2.8
SSBP3-204ENST00000371320 TAB2Q9NYJ8 693 aa32.57■■■□□ 2.8
SSBP3-204ENST00000371320 EP400Q96L91 3159 aa32.57■■■□□ 2.8
SSBP3-204ENST00000371320 GYPCP04921 128 aa32.57■■■□□ 2.8
SSBP3-204ENST00000371320 CCDC175P0C221 793 aa32.57■■■□□ 2.8
SSBP3-204ENST00000371320 PLCG1P19174 1290 aa32.57■■■□□ 2.8
SSBP3-204ENST00000371320 JAKMIP3Q5VZ66 844 aa32.57■■■□□ 2.8
SSBP3-204ENST00000371320 LRRC47Q8N1G4 583 aaKnown RBP32.57■■■□□ 2.8
SSBP3-204ENST00000371320 PROM2Q8N271 834 aa32.57■■■□□ 2.8
SSBP3-204ENST00000371320 CCDC51Q96ER9 411 aa32.57■■■□□ 2.8
SSBP3-204ENST00000371320 STIM1Q13586 685 aa32.56■■■□□ 2.8
SSBP3-204ENST00000371320 USP40Q9NVE5 1235 aa32.56■■■□□ 2.8
SSBP3-204ENST00000371320 RHOBTB3O94955 611 aa32.55■■■□□ 2.8
SSBP3-204ENST00000371320 SRGNP10124 158 aa32.55■■■□□ 2.8
SSBP3-204ENST00000371320 CASQ1P31415 396 aa32.55■■■□□ 2.8
SSBP3-204ENST00000371320 EIF6P56537 245 aaKnown RBP32.55■■■□□ 2.8
SSBP3-204ENST00000371320 LRRN4CLQ8ND94 238 aa32.55■■■□□ 2.8
SSBP3-204ENST00000371320 LRRC15Q8TF66 581 aa32.55■■■□□ 2.8
SSBP3-204ENST00000371320 SRRTQ9BXP5 876 aaKnown RBP32.55■■■□□ 2.8
SSBP3-204ENST00000371320 FOCADQ5VW36 1801 aa32.55■■■□□ 2.8
SSBP3-204ENST00000371320 IGKV6D-41A0A0C4DH26 115 aa32.55■■■□□ 2.8
SSBP3-204ENST00000371320 CBX1P83916 185 aa32.55■■■□□ 2.8
SSBP3-204ENST00000371320 ORC2Q13416 577 aaPredicted RBP32.55■■■□□ 2.8
SSBP3-204ENST00000371320 PARP3Q9Y6F1 533 aa32.55■■■□□ 2.8
SSBP3-204ENST00000371320 SPDYE4A6NLX3 237 aa32.54■■■□□ 2.8
SSBP3-204ENST00000371320 NPR1P16066 1061 aa32.54■■■□□ 2.8
SSBP3-204ENST00000371320 FXR1P51114 621 aaKnown RBP eCLIP32.54■■■□□ 2.8
SSBP3-204ENST00000371320 DOK7Q18PE1 504 aa32.54■■■□□ 2.8
SSBP3-204ENST00000371320 ERCC6LQ2NKX8 1250 aa32.54■■■□□ 2.8
SSBP3-204ENST00000371320 RAD9BQ6WBX8 426 aa32.54■■■□□ 2.8
SSBP3-204ENST00000371320 TMEM260Q9NX78 707 aa32.54■■■□□ 2.8
SSBP3-204ENST00000371320 SERPINB13Q9UIV8 391 aa32.54■■■□□ 2.8
SSBP3-204ENST00000371320 HMGB2P26583 209 aaKnown RBP32.54■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms