RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 QRICH1Q2TAL8 776 aa20■□□□□ 0.79
SSBP3-203ENST00000371319 UVSSAQ2YD98 709 aa20■□□□□ 0.79
SSBP3-203ENST00000371319 GPC2Q8N158 579 aa20■□□□□ 0.79
SSBP3-203ENST00000371319 SDF4Q9BRK5 362 aa20■□□□□ 0.79
SSBP3-203ENST00000371319 FAM13BQ9NYF5 915 aa20■□□□□ 0.79
SSBP3-203ENST00000371319 GPRC5DQ9NZD1 345 aa20■□□□□ 0.79
SSBP3-203ENST00000371319 H7C1D1 291 aa20■□□□□ 0.79
SSBP3-203ENST00000371319 NONOQ15233 471 aaKnown RBP eCLIP20■□□□□ 0.791e-6■■■□□ 17.3
SSBP3-203ENST00000371319 CDC37Q16543 378 aaPredicted RBP20■□□□□ 0.79
SSBP3-203ENST00000371319 TRPM4Q8TD43 1214 aa20■□□□□ 0.79
SSBP3-203ENST00000371319 SYT17Q9BSW7 474 aa20■□□□□ 0.79
SSBP3-203ENST00000371319 RIC8AQ9NPQ8 531 aa20■□□□□ 0.79
SSBP3-203ENST00000371319 TMEM260Q9NX78 707 aa20■□□□□ 0.79
SSBP3-203ENST00000371319 IL17AQ16552 155 aa19.99■□□□□ 0.79
SSBP3-203ENST00000371319 ANO6Q4KMQ2 910 aa19.99■□□□□ 0.79
SSBP3-203ENST00000371319 SYDE2Q5VT97 1194 aa19.99■□□□□ 0.79
SSBP3-203ENST00000371319 USP49Q70CQ1 688 aa19.99■□□□□ 0.79
SSBP3-203ENST00000371319 REXO1Q8N1G1 1221 aaKnown RBP19.99■□□□□ 0.79
SSBP3-203ENST00000371319 BIN2Q9UBW5 565 aaPredicted RBP19.99■□□□□ 0.79
SSBP3-203ENST00000371319 TMEM232C9JQI7 657 aa19.98■□□□□ 0.79
SSBP3-203ENST00000371319 LONRF3Q496Y0 759 aa19.98■□□□□ 0.79
SSBP3-203ENST00000371319 JAKMIP3Q5VZ66 844 aa19.98■□□□□ 0.79
SSBP3-203ENST00000371319 KRBA2Q6ZNG9 492 aa19.98■□□□□ 0.79
SSBP3-203ENST00000371319 ERCC4Q92889 916 aaPredicted RBP19.98■□□□□ 0.79
SSBP3-203ENST00000371319 DEFB129Q9H1M3 183 aa19.98■□□□□ 0.79
SSBP3-203ENST00000371319 GOPCQ9HD26 462 aa19.98■□□□□ 0.79
SSBP3-203ENST00000371319 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.97■□□□□ 0.79
SSBP3-203ENST00000371319 ASNSP08243 561 aa19.97■□□□□ 0.79
SSBP3-203ENST00000371319 CLK2P49760 499 aaKnown RBP19.97■□□□□ 0.79
SSBP3-203ENST00000371319 SPICE1Q8N0Z3 855 aa19.97■□□□□ 0.79
SSBP3-203ENST00000371319 FAM200AQ8TCP9 573 aa19.97■□□□□ 0.79
SSBP3-203ENST00000371319 PPP1R9BQ96SB3 815 aa19.97■□□□□ 0.79
SSBP3-203ENST00000371319 VCPKMTQ9H867 229 aa19.97■□□□□ 0.79
SSBP3-203ENST00000371319 KIAA1468Q9P260 1216 aa19.97■□□□□ 0.79
SSBP3-203ENST00000371319 YBX3P16989 372 aaKnown RBP eCLIP19.96■□□□□ 0.79
SSBP3-203ENST00000371319 CCDC173Q0VFZ6 552 aa19.96■□□□□ 0.79
SSBP3-203ENST00000371319 STX1AQ16623 288 aa19.96■□□□□ 0.79
SSBP3-203ENST00000371319 ANGEL2Q5VTE6 544 aaKnown RBP19.96■□□□□ 0.79
SSBP3-203ENST00000371319 ARL6IP4Q66PJ3 421 aaKnown RBP19.96■□□□□ 0.79
SSBP3-203ENST00000371319 CCDC84Q86UT8 332 aaPredicted RBP19.96■□□□□ 0.79
SSBP3-203ENST00000371319 APOBEC3FQ8IUX4 373 aaKnown RBP19.96■□□□□ 0.79
SSBP3-203ENST00000371319 ELOA2Q8IYF1 753 aaPredicted RBP19.96■□□□□ 0.79
SSBP3-203ENST00000371319 GLIS2Q9BZE0 524 aaPredicted RBP19.96■□□□□ 0.79
SSBP3-203ENST00000371319 DOCK1Q14185 1865 aa19.96■□□□□ 0.79
SSBP3-203ENST00000371319 VWA3AA6NCI4 1184 aa19.95■□□□□ 0.78
SSBP3-203ENST00000371319 EPS15P42566 896 aa19.95■□□□□ 0.78
SSBP3-203ENST00000371319 SNAP25P60880 206 aa19.95■□□□□ 0.78
SSBP3-203ENST00000371319 FAM83BQ5T0W9 1011 aa19.95■□□□□ 0.78
SSBP3-203ENST00000371319 NBPF12Q5TAG4 269 aaPredicted RBP19.95■□□□□ 0.78
SSBP3-203ENST00000371319 NEK8Q86SG6 692 aa19.95■□□□□ 0.78
SSBP3-203ENST00000371319 TBCKQ8TEA7 893 aa19.95■□□□□ 0.78
SSBP3-203ENST00000371319 SYMPKQ92797 1274 aaKnown RBP19.95■□□□□ 0.78
SSBP3-203ENST00000371319 EPSTI1Q96J88 318 aa19.95■□□□□ 0.78
SSBP3-203ENST00000371319 DNAJC25Q9H1X3 360 aa19.95■□□□□ 0.78
SSBP3-203ENST00000371319 TMEM60Q9H2L4 133 aa19.95■□□□□ 0.78
SSBP3-203ENST00000371319 SH2D4AQ9H788 454 aa19.95■□□□□ 0.78
SSBP3-203ENST00000371319 A0A087X0B3 334 aa19.95■□□□□ 0.78
SSBP3-203ENST00000371319 POLR2DO15514 142 aaKnown RBP19.95■□□□□ 0.78
SSBP3-203ENST00000371319 EDIL3O43854 480 aa19.95■□□□□ 0.78
SSBP3-203ENST00000371319 HIRAP54198 1017 aaPredicted RBP19.95■□□□□ 0.78
SSBP3-203ENST00000371319 UBE2SQ16763 222 aa19.95■□□□□ 0.78
SSBP3-203ENST00000371319 C11orf57Q6ZUT1 292 aaPredicted RBP19.95■□□□□ 0.78
SSBP3-203ENST00000371319 CUL5Q93034 780 aa19.95■□□□□ 0.78
SSBP3-203ENST00000371319 CBX8Q9HC52 389 aa19.95■□□□□ 0.78
SSBP3-203ENST00000371319 GINM1Q9NU53 330 aa19.95■□□□□ 0.78
SSBP3-203ENST00000371319 SERTAD1Q9UHV2 236 aa19.95■□□□□ 0.78
SSBP3-203ENST00000371319 PRR12Q9ULL5 1215 aa19.95■□□□□ 0.78
SSBP3-203ENST00000371319 PCDHA1Q9Y5I3 950 aa19.95■□□□□ 0.78
SSBP3-203ENST00000371319 A0A087WWV3 80 aa19.94■□□□□ 0.78
SSBP3-203ENST00000371319 ACTN4O43707 911 aaKnown RBP19.94■□□□□ 0.78
SSBP3-203ENST00000371319 MDM2Q00987 491 aaPredicted RBP19.94■□□□□ 0.78
SSBP3-203ENST00000371319 IKQ13123 557 aaPredicted RBP19.94■□□□□ 0.78
SSBP3-203ENST00000371319 CNNM3Q8NE01 707 aa19.94■□□□□ 0.78
SSBP3-203ENST00000371319 ANP32BQ92688 251 aaKnown RBP19.94■□□□□ 0.78
SSBP3-203ENST00000371319 CTNND1O60716 968 aaKnown RBP19.93■□□□□ 0.78
SSBP3-203ENST00000371319 MRPL12P52815 198 aaKnown RBP19.93■□□□□ 0.78
SSBP3-203ENST00000371319 ORC2Q13416 577 aaPredicted RBP19.93■□□□□ 0.78
SSBP3-203ENST00000371319 LETM2Q2VYF4 491 aa19.93■□□□□ 0.78
SSBP3-203ENST00000371319 PDLIM2Q96JY6 352 aa19.93■□□□□ 0.78
SSBP3-203ENST00000371319 AMNQ9BXJ7 453 aa19.93■□□□□ 0.78
SSBP3-203ENST00000371319 PSTPIP2Q9H939 334 aa19.93■□□□□ 0.78
SSBP3-203ENST00000371319 ANO10Q9NW15 660 aa19.93■□□□□ 0.78
SSBP3-203ENST00000371319 RNF181Q9P0P0 153 aa19.93■□□□□ 0.78
SSBP3-203ENST00000371319 TUBE1Q9UJT0 475 aa19.93■□□□□ 0.78
SSBP3-203ENST00000371319 LAD1O00515 517 aa19.92■□□□□ 0.78
SSBP3-203ENST00000371319 CCNT1O60563 726 aaKnown RBP19.92■□□□□ 0.78
SSBP3-203ENST00000371319 PLA2G6O60733 806 aa19.92■□□□□ 0.78
SSBP3-203ENST00000371319 DDNO94850 711 aaPredicted RBP19.92■□□□□ 0.78
SSBP3-203ENST00000371319 CAVIN2O95810 425 aa19.92■□□□□ 0.78
SSBP3-203ENST00000371319 LONP1P36776 959 aaKnown RBP19.92■□□□□ 0.78
SSBP3-203ENST00000371319 PRPHP41219 470 aa19.92■□□□□ 0.78
SSBP3-203ENST00000371319 STAT2P52630 851 aa19.92■□□□□ 0.78
SSBP3-203ENST00000371319 PNOCQ13519 176 aa19.92■□□□□ 0.78
SSBP3-203ENST00000371319 ZYXQ15942 572 aaKnown RBP19.92■□□□□ 0.78
SSBP3-203ENST00000371319 FBXO11Q86XK2 927 aa19.92■□□□□ 0.78
SSBP3-203ENST00000371319 ZNF341Q9BYN7 854 aa19.92■□□□□ 0.78
SSBP3-203ENST00000371319 GLT8D2Q9H1C3 349 aa19.92■□□□□ 0.78
SSBP3-203ENST00000371319 GGA3Q9NZ52 723 aa19.92■□□□□ 0.78
SSBP3-203ENST00000371319 ZNF112Q9UJU3 913 aa19.92■□□□□ 0.78
SSBP3-203ENST00000371319 MYH7BA7E2Y1 1941 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms