RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 AFG3L2Q9Y4W6 797 aa19.85■□□□□ 0.77
UBE3D-203ENST00000369747 CTAGE5O15320 804 aa19.84■□□□□ 0.77
UBE3D-203ENST00000369747 CYTH3O43739 400 aa19.84■□□□□ 0.77
UBE3D-203ENST00000369747 MMP1P03956 469 aa19.84■□□□□ 0.77
UBE3D-203ENST00000369747 GNL2Q13823 731 aaKnown RBP19.84■□□□□ 0.77
UBE3D-203ENST00000369747 SLC39A14Q15043 492 aa19.84■□□□□ 0.77
UBE3D-203ENST00000369747 ANO6Q4KMQ2 910 aa19.84■□□□□ 0.77
UBE3D-203ENST00000369747 ZSCAN30Q86W11 494 aa19.84■□□□□ 0.77
UBE3D-203ENST00000369747 FMR1NBQ8N0W7 255 aaPredicted RBP19.84■□□□□ 0.77
UBE3D-203ENST00000369747 ZNF784Q8NCA9 323 aaPredicted RBP19.84■□□□□ 0.77
UBE3D-203ENST00000369747 OTUD5Q96G74 571 aa19.84■□□□□ 0.77
UBE3D-203ENST00000369747 AS3MTQ9HBK9 375 aa19.84■□□□□ 0.77
UBE3D-203ENST00000369747 BACE1P56817 501 aa19.84■□□□□ 0.77
UBE3D-203ENST00000369747 ASPRV1Q53RT3 343 aa19.84■□□□□ 0.77
UBE3D-203ENST00000369747 AXDND1Q5T1B0 1012 aaPredicted RBP19.84■□□□□ 0.77
UBE3D-203ENST00000369747 C2orf69Q8N8R5 385 aa19.84■□□□□ 0.77
UBE3D-203ENST00000369747 DCAF4Q8WV16 495 aa19.84■□□□□ 0.77
UBE3D-203ENST00000369747 PIBF1Q8WXW3 757 aa19.84■□□□□ 0.77
UBE3D-203ENST00000369747 EMILIN3Q9NT22 766 aa19.84■□□□□ 0.77
UBE3D-203ENST00000369747 CNTNAP5Q8WYK1 1306 aa19.83■□□□□ 0.77
UBE3D-203ENST00000369747 PCNTO95613 3336 aa19.83■□□□□ 0.77
UBE3D-203ENST00000369747 A0A1B0GVL5 298 aa19.83■□□□□ 0.77
UBE3D-203ENST00000369747 KINO60870 393 aaKnown RBP19.83■□□□□ 0.77
UBE3D-203ENST00000369747 SLC16A2P36021 539 aa19.83■□□□□ 0.77
UBE3D-203ENST00000369747 SASS6Q6UVJ0 657 aa19.83■□□□□ 0.77
UBE3D-203ENST00000369747 RNF26Q9BY78 433 aaPredicted RBP19.83■□□□□ 0.77
UBE3D-203ENST00000369747 KCNJ14Q9UNX9 436 aa19.83■□□□□ 0.77
UBE3D-203ENST00000369747 V9GY48 417 aaPredicted RBP19.83■□□□□ 0.77
UBE3D-203ENST00000369747 PASKQ96RG2 1323 aa19.83■□□□□ 0.76
UBE3D-203ENST00000369747 TRPM7Q96QT4 1865 aa19.83■□□□□ 0.76
UBE3D-203ENST00000369747 IRF6O14896 467 aa19.82■□□□□ 0.76
UBE3D-203ENST00000369747 ADCY5O95622 1261 aa19.82■□□□□ 0.76
UBE3D-203ENST00000369747 BMP3P12645 472 aa19.82■□□□□ 0.76
UBE3D-203ENST00000369747 GNAQP50148 359 aa19.82■□□□□ 0.76
UBE3D-203ENST00000369747 HMGCS2P54868 508 aa19.82■□□□□ 0.76
UBE3D-203ENST00000369747 FKBP1BP68106 108 aa19.82■□□□□ 0.76
UBE3D-203ENST00000369747 PTPAQ15257 358 aa19.82■□□□□ 0.76
UBE3D-203ENST00000369747 FAM83BQ5T0W9 1011 aa19.82■□□□□ 0.76
UBE3D-203ENST00000369747 GPATCH4Q5T3I0 446 aaKnown RBP19.82■□□□□ 0.76
UBE3D-203ENST00000369747 ERO1BQ86YB8 467 aa19.82■□□□□ 0.76
UBE3D-203ENST00000369747 SPDYE5A6NIY4 337 aa19.82■□□□□ 0.76
UBE3D-203ENST00000369747 BTBD18B2RXH4 712 aa19.82■□□□□ 0.76
UBE3D-203ENST00000369747 AP5Z1O43299 807 aa19.82■□□□□ 0.76
UBE3D-203ENST00000369747 NDUFA8P51970 172 aa19.82■□□□□ 0.76
UBE3D-203ENST00000369747 NOSTRINQ8IVI9 506 aa19.82■□□□□ 0.76
UBE3D-203ENST00000369747 SMC1BQ8NDV3 1235 aa19.82■□□□□ 0.76
UBE3D-203ENST00000369747 OPTNQ96CV9 577 aa19.82■□□□□ 0.76
UBE3D-203ENST00000369747 VAT1LQ9HCJ6 419 aa19.82■□□□□ 0.76
UBE3D-203ENST00000369747 TMEM232C9JQI7 657 aa19.81■□□□□ 0.76
UBE3D-203ENST00000369747 TOMM70O94826 608 aa19.81■□□□□ 0.76
UBE3D-203ENST00000369747 PPATQ06203 517 aa19.81■□□□□ 0.76
UBE3D-203ENST00000369747 DIS3L2Q8IYB7 885 aaKnown RBP19.81■□□□□ 0.76
UBE3D-203ENST00000369747 SLC10A4Q96EP9 437 aa19.81■□□□□ 0.76
UBE3D-203ENST00000369747 CBX8Q9HC52 389 aa19.81■□□□□ 0.76
UBE3D-203ENST00000369747 CCDC39Q9UFE4 941 aa19.81■□□□□ 0.76
UBE3D-203ENST00000369747 MARCKSP29966 332 aaPredicted RBP19.8■□□□□ 0.76
UBE3D-203ENST00000369747 SAFBQ15424 915 aaKnown RBP eCLIP19.8■□□□□ 0.76
UBE3D-203ENST00000369747 PKN1Q16512 942 aa19.8■□□□□ 0.76
UBE3D-203ENST00000369747 SHISA4Q96DD7 197 aa19.8■□□□□ 0.76
UBE3D-203ENST00000369747 LZTS2Q9BRK4 669 aa19.8■□□□□ 0.76
UBE3D-203ENST00000369747 SPZ1Q9BXG8 430 aa19.8■□□□□ 0.76
UBE3D-203ENST00000369747 FOXP1Q9H334 677 aaPredicted RBP19.8■□□□□ 0.76
UBE3D-203ENST00000369747 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.8■□□□□ 0.76
UBE3D-203ENST00000369747 NOL7Q9UMY1 257 aaKnown RBP19.8■□□□□ 0.76
UBE3D-203ENST00000369747 PTPRFP10586 1907 aa19.8■□□□□ 0.76
UBE3D-203ENST00000369747 PPP6R2O75170 966 aa19.8■□□□□ 0.76
UBE3D-203ENST00000369747 VCAM1P19320 739 aa19.8■□□□□ 0.76
UBE3D-203ENST00000369747 CMA1P23946 247 aa19.8■□□□□ 0.76
UBE3D-203ENST00000369747 GJA5P36382 358 aa19.8■□□□□ 0.76
UBE3D-203ENST00000369747 USP14P54578 494 aa19.8■□□□□ 0.76
UBE3D-203ENST00000369747 LUZP1Q86V48 1076 aa19.8■□□□□ 0.76
UBE3D-203ENST00000369747 LPAR1Q92633 364 aa19.8■□□□□ 0.76
UBE3D-203ENST00000369747 RIOX1Q9H6W3 641 aa19.8■□□□□ 0.76
UBE3D-203ENST00000369747 PRPF3O43395 683 aaKnown RBP19.79■□□□□ 0.76
UBE3D-203ENST00000369747 ADGRF4Q8IZF3 695 aa19.79■□□□□ 0.76
UBE3D-203ENST00000369747 DNAJC25Q9H1X3 360 aa19.79■□□□□ 0.76
UBE3D-203ENST00000369747 FBXO28Q9NVF7 368 aa19.79■□□□□ 0.76
UBE3D-203ENST00000369747 C19orf81C9J6K1 198 aa19.78■□□□□ 0.76
UBE3D-203ENST00000369747 TOB1P50616 345 aaPredicted RBP19.78■□□□□ 0.76
UBE3D-203ENST00000369747 IKQ13123 557 aaPredicted RBP19.78■□□□□ 0.76
UBE3D-203ENST00000369747 HOMER1Q86YM7 354 aa19.78■□□□□ 0.76
UBE3D-203ENST00000369747 JMJD4Q9H9V9 463 aa19.78■□□□□ 0.76
UBE3D-203ENST00000369747 UNCXA6NJT0 531 aa19.78■□□□□ 0.76
UBE3D-203ENST00000369747 WDR46O15213 610 aaKnown RBP19.78■□□□□ 0.76
UBE3D-203ENST00000369747 HUNKP57058 714 aa19.78■□□□□ 0.76
UBE3D-203ENST00000369747 AKAP17AQ02040 695 aaKnown RBP19.78■□□□□ 0.76
UBE3D-203ENST00000369747 PPIL2Q13356 520 aa19.78■□□□□ 0.76
UBE3D-203ENST00000369747 RBM46Q8TBY0 533 aaKnown RBP19.78■□□□□ 0.76
UBE3D-203ENST00000369747 PIGSQ96S52 555 aa19.78■□□□□ 0.76
UBE3D-203ENST00000369747 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.78■□□□□ 0.76
UBE3D-203ENST00000369747 PFKFB1P16118 471 aa19.77■□□□□ 0.76
UBE3D-203ENST00000369747 SMARCA1P28370 1054 aa19.77■□□□□ 0.76
UBE3D-203ENST00000369747 ZNF165P49910 485 aa19.77■□□□□ 0.76
UBE3D-203ENST00000369747 STAT2P52630 851 aa19.77■□□□□ 0.76
UBE3D-203ENST00000369747 NR5A1Q13285 461 aa19.77■□□□□ 0.76
UBE3D-203ENST00000369747 SAMD1Q6SPF0 538 aaPredicted RBP19.77■□□□□ 0.76
UBE3D-203ENST00000369747 JMYQ8N9B5 988 aa19.77■□□□□ 0.76
UBE3D-203ENST00000369747 OXER1Q8TDS5 423 aa19.77■□□□□ 0.76
UBE3D-203ENST00000369747 CAVIN2O95810 425 aa19.76■□□□□ 0.75
UBE3D-203ENST00000369747 SNAP25P60880 206 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms