RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 ADGRG1Q9Y653 693 aa12.96□□□□□ -0.33
RAB39B-201ENST00000369454 DOK7Q18PE1 504 aa12.96□□□□□ -0.33
RAB39B-201ENST00000369454 TCP11X2Q5H9J9 407 aa12.96□□□□□ -0.33
RAB39B-201ENST00000369454 PCMTD1Q96MG8 357 aaPredicted RBP12.96□□□□□ -0.33
RAB39B-201ENST00000369454 LAMB2P55268 1798 aa12.96□□□□□ -0.33
RAB39B-201ENST00000369454 COL5A3P25940 1745 aaPredicted RBP12.96□□□□□ -0.34
RAB39B-201ENST00000369454 TBCKQ8TEA7 893 aa12.96□□□□□ -0.34
RAB39B-201ENST00000369454 CHP1Q99653 195 aa12.96□□□□□ -0.34
RAB39B-201ENST00000369454 TCP11L1Q9NUJ3 509 aa12.96□□□□□ -0.34
RAB39B-201ENST00000369454 PALM3A6NDB9 673 aaPredicted RBP12.95□□□□□ -0.34
RAB39B-201ENST00000369454 MPHOSPH10O00566 681 aaKnown RBP12.95□□□□□ -0.34
RAB39B-201ENST00000369454 ASIC1P78348 528 aa12.95□□□□□ -0.34
RAB39B-201ENST00000369454 ST5P78524 1137 aa12.95□□□□□ -0.34
RAB39B-201ENST00000369454 ZNF771Q7L3S4 317 aaPredicted RBP12.95□□□□□ -0.34
RAB39B-201ENST00000369454 CABP7Q86V35 215 aa12.95□□□□□ -0.34
RAB39B-201ENST00000369454 ZNF219Q9P2Y4 722 aaPredicted RBP12.95□□□□□ -0.34
RAB39B-201ENST00000369454 RWDD2AQ9UIY3 292 aa12.95□□□□□ -0.34
RAB39B-201ENST00000369454 FCER1AP12319 257 aa12.95□□□□□ -0.34
RAB39B-201ENST00000369454 GYS1P13807 737 aa12.95□□□□□ -0.34
RAB39B-201ENST00000369454 KIF4BQ2VIQ3 1234 aa12.95□□□□□ -0.34
RAB39B-201ENST00000369454 ARL6IP4Q66PJ3 421 aaKnown RBP12.95□□□□□ -0.34
RAB39B-201ENST00000369454 FCHSD1Q86WN1 690 aa12.95□□□□□ -0.34
RAB39B-201ENST00000369454 RRP36Q96EU6 259 aaKnown RBP12.95□□□□□ -0.34
RAB39B-201ENST00000369454 TRIM10Q9UDY6 481 aa12.95□□□□□ -0.34
RAB39B-201ENST00000369454 PDS5AQ29RF7 1337 aaKnown RBP12.95□□□□□ -0.34
RAB39B-201ENST00000369454 TADA3O75528 432 aa12.95□□□□□ -0.34
RAB39B-201ENST00000369454 ERVK-24P63145 666 aa12.95□□□□□ -0.34
RAB39B-201ENST00000369454 DYMQ7RTS9 669 aa12.95□□□□□ -0.34
RAB39B-201ENST00000369454 POTEDQ86YR6 584 aa12.95□□□□□ -0.34
RAB39B-201ENST00000369454 KRT222Q8N1A0 295 aa12.95□□□□□ -0.34
RAB39B-201ENST00000369454 RMND1Q9NWS8 449 aa12.95□□□□□ -0.34
RAB39B-201ENST00000369454 RREB1Q92766 1687 aa12.94□□□□□ -0.34
RAB39B-201ENST00000369454 KIF5CO60282 957 aa12.94□□□□□ -0.34
RAB39B-201ENST00000369454 SLC16A2P36021 539 aa12.94□□□□□ -0.34
RAB39B-201ENST00000369454 PDE4DQ08499 809 aa12.94□□□□□ -0.34
RAB39B-201ENST00000369454 NONOQ15233 471 aaKnown RBP eCLIP12.94□□□□□ -0.34
RAB39B-201ENST00000369454 TBC1D16Q8TBP0 767 aa12.94□□□□□ -0.34
RAB39B-201ENST00000369454 PANX2Q96RD6 677 aa12.94□□□□□ -0.34
RAB39B-201ENST00000369454 FAM196BA6NMK8 535 aa12.94□□□□□ -0.34
RAB39B-201ENST00000369454 NKRFO15226 690 aaKnown RBP eCLIP12.94□□□□□ -0.34
RAB39B-201ENST00000369454 KLK7P49862 253 aa12.94□□□□□ -0.34
RAB39B-201ENST00000369454 DPP8Q6V1X1 898 aaPredicted RBP12.94□□□□□ -0.34
RAB39B-201ENST00000369454 CNGA4Q8IV77 575 aa12.94□□□□□ -0.34
RAB39B-201ENST00000369454 ZNF287Q9HBT7 754 aa12.94□□□□□ -0.34
RAB39B-201ENST00000369454 C6orf50Q9HD87 102 aa12.94□□□□□ -0.34
RAB39B-201ENST00000369454 ABHD10Q9NUJ1 306 aa12.94□□□□□ -0.34
RAB39B-201ENST00000369454 RNF216Q9NWF9 866 aaPredicted RBP12.94□□□□□ -0.34
RAB39B-201ENST00000369454 TNRC6CQ9HCJ0 1690 aaKnown RBP12.94□□□□□ -0.34
RAB39B-201ENST00000369454 B4DLN1 442 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 PBX1P40424 430 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 CACNB3P54284 484 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 PPP4CP60510 307 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 TMCO3Q6UWJ1 677 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 SEPT12Q8IYM1 358 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 KIFC2Q96AC6 838 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 SLC39A2Q9NP94 309 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 GUCA1BQ9UMX6 200 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 CASZ1Q86V15 1759 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 GOLGA6L9A6NEM1 432 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 M0R2N6 131 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 TRIM37O94972 964 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 OR52Z1P0C646 297 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 TNNI2P48788 182 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 RHBDL3P58872 404 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 STK4Q13043 487 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 IRF2BP1Q8IU81 584 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 SLC35F6Q8N357 371 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 CSGALNACT2Q8N6G5 542 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 RBM17Q96I25 401 aaKnown RBP12.93□□□□□ -0.34
RAB39B-201ENST00000369454 SH3GLB2Q9NR46 395 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 GPR75-ASB3A0A0A6YYF3 556 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 TTC26A0AVF1 554 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 G3V3G9 751 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 POLR3GO15318 223 aaPredicted RBP12.93□□□□□ -0.34
RAB39B-201ENST00000369454 IDEP14735 1019 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 AKR1B1P15121 316 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 H2AFXP16104 143 aaPredicted RBP12.93□□□□□ -0.34
RAB39B-201ENST00000369454 UBE2SQ16763 222 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 DCAF8Q5TAQ9 597 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 C16orf86Q6ZW13 317 aa12.93□□□□□ -0.34
RAB39B-201ENST00000369454 REXO1Q8N1G1 1221 aaKnown RBP12.93□□□□□ -0.34
RAB39B-201ENST00000369454 GJD4Q96KN9 370 aaPredicted RBP12.93□□□□□ -0.34
RAB39B-201ENST00000369454 MAGEC2Q9UBF1 373 aaPredicted RBP12.93□□□□□ -0.34
RAB39B-201ENST00000369454 MORC2Q9Y6X9 1032 aaPredicted RBP12.93□□□□□ -0.34
RAB39B-201ENST00000369454 POTEMA6NI47 508 aa12.92□□□□□ -0.34
RAB39B-201ENST00000369454 PSMA7O14818 248 aa12.92□□□□□ -0.34
RAB39B-201ENST00000369454 TDP2O95551 362 aa12.92□□□□□ -0.34
RAB39B-201ENST00000369454 MAP3K9P80192 1104 aa12.92□□□□□ -0.34
RAB39B-201ENST00000369454 DMTNQ08495 405 aa12.92□□□□□ -0.34
RAB39B-201ENST00000369454 TTBK2Q6IQ55 1244 aa12.92□□□□□ -0.34
RAB39B-201ENST00000369454 NEK8Q86SG6 692 aa12.92□□□□□ -0.34
RAB39B-201ENST00000369454 ADSSL1Q8N142 457 aa12.92□□□□□ -0.34
RAB39B-201ENST00000369454 DAGLAQ9Y4D2 1042 aa12.92□□□□□ -0.34
RAB39B-201ENST00000369454 MRFAP1Q9Y605 127 aa12.92□□□□□ -0.34
RAB39B-201ENST00000369454 ATP2B4P23634 1241 aa12.92□□□□□ -0.34
RAB39B-201ENST00000369454 TCP10Q12799 353 aa12.92□□□□□ -0.34
RAB39B-201ENST00000369454 STIM1Q13586 685 aa12.92□□□□□ -0.34
RAB39B-201ENST00000369454 FNBP4Q8N3X1 1017 aaPredicted RBP12.92□□□□□ -0.34
RAB39B-201ENST00000369454 NEDD1Q8NHV4 660 aa12.92□□□□□ -0.34
RAB39B-201ENST00000369454 EXOC1Q9NV70 894 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms