RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 SNHG28P0DPA3 235 aa14.7□□□□□ -0.06
EFNA1-201ENST00000368406 PDIA3P30101 505 aaKnown RBP14.7□□□□□ -0.06
EFNA1-201ENST00000368406 SLC16A2P36021 539 aa14.7□□□□□ -0.06
EFNA1-201ENST00000368406 FLT3LGP49771 235 aa14.7□□□□□ -0.06
EFNA1-201ENST00000368406 RCAN1P53805 252 aa14.7□□□□□ -0.06
EFNA1-201ENST00000368406 CPLX2Q6PUV4 134 aaKnown RBP14.7□□□□□ -0.06
EFNA1-201ENST00000368406 NBPF11Q86T75 865 aa14.7□□□□□ -0.06
EFNA1-201ENST00000368406 RAET1EQ8TD07 263 aa14.7□□□□□ -0.06
EFNA1-201ENST00000368406 ARMC5Q96C12 935 aa14.7□□□□□ -0.06
EFNA1-201ENST00000368406 ATG4CQ96DT6 458 aa14.7□□□□□ -0.06
EFNA1-201ENST00000368406 ZSCAN31Q96LW9 406 aaPredicted RBP14.7□□□□□ -0.06
EFNA1-201ENST00000368406 MAP3K14Q99558 947 aa14.7□□□□□ -0.06
EFNA1-201ENST00000368406 SPATC1LQ9H0A9 340 aa14.7□□□□□ -0.06
EFNA1-201ENST00000368406 PORCNQ9H237 461 aa14.7□□□□□ -0.06
EFNA1-201ENST00000368406 MAD2L2Q9UI95 211 aa14.7□□□□□ -0.06
EFNA1-201ENST00000368406 GJD2Q9UKL4 321 aa14.7□□□□□ -0.06
EFNA1-201ENST00000368406 A0A0G2JMZ2 1700 aa14.69□□□□□ -0.06
EFNA1-201ENST00000368406 FDX1P10109 184 aa14.69□□□□□ -0.06
EFNA1-201ENST00000368406 SLC9C1Q4G0N8 1177 aa14.69□□□□□ -0.06
EFNA1-201ENST00000368406 SYDE2Q5VT97 1194 aa14.69□□□□□ -0.06
EFNA1-201ENST00000368406 SHCBP1Q8NEM2 672 aa14.69□□□□□ -0.06
EFNA1-201ENST00000368406 PXYLP1Q8TE99 480 aa14.69□□□□□ -0.06
EFNA1-201ENST00000368406 SOCS4Q8WXH5 440 aa14.69□□□□□ -0.06
EFNA1-201ENST00000368406 LZTS2Q9BRK4 669 aa14.69□□□□□ -0.06
EFNA1-201ENST00000368406 UBA5Q9GZZ9 404 aa14.69□□□□□ -0.06
EFNA1-201ENST00000368406 NCOA5Q9HCD5 579 aaKnown RBP14.69□□□□□ -0.06
EFNA1-201ENST00000368406 SH2B1Q9NRF2 756 aaPredicted RBP14.69□□□□□ -0.06
EFNA1-201ENST00000368406 GABRQQ9UN88 632 aa14.69□□□□□ -0.06
EFNA1-201ENST00000368406 BRCA2P51587 3418 aa14.69□□□□□ -0.06
EFNA1-201ENST00000368406 TMEM132BQ14DG7 1078 aa14.68□□□□□ -0.06
EFNA1-201ENST00000368406 PPP2R5BQ15173 497 aa14.68□□□□□ -0.06
EFNA1-201ENST00000368406 TTBK2Q6IQ55 1244 aa14.68□□□□□ -0.06
EFNA1-201ENST00000368406 GPR142Q7Z601 462 aa14.68□□□□□ -0.06
EFNA1-201ENST00000368406 PLEKHH3Q7Z736 793 aa14.68□□□□□ -0.06
EFNA1-201ENST00000368406 STAG2Q8N3U4 1231 aa14.68□□□□□ -0.06
EFNA1-201ENST00000368406 CCDC82Q8N4S0 544 aa14.68□□□□□ -0.06
EFNA1-201ENST00000368406 REPS2Q8NFH8 660 aa14.68□□□□□ -0.06
EFNA1-201ENST00000368406 PIBF1Q8WXW3 757 aa14.68□□□□□ -0.06
EFNA1-201ENST00000368406 NUDT12Q9BQG2 462 aa14.68□□□□□ -0.06
EFNA1-201ENST00000368406 MOV10L1Q9BXT6 1211 aaKnown RBP14.68□□□□□ -0.06
EFNA1-201ENST00000368406 MROH8Q9H579 483 aa14.68□□□□□ -0.06
EFNA1-201ENST00000368406 VAT1LQ9HCJ6 419 aa14.68□□□□□ -0.06
EFNA1-201ENST00000368406 SEC63Q9UGP8 760 aaKnown RBP14.68□□□□□ -0.06
EFNA1-201ENST00000368406 NID2Q14112 1375 aa14.68□□□□□ -0.06
EFNA1-201ENST00000368406 PALM3A6NDB9 673 aaPredicted RBP14.67□□□□□ -0.06
EFNA1-201ENST00000368406 CCDC85CA6NKD9 419 aa14.67□□□□□ -0.06
EFNA1-201ENST00000368406 ATP2A1O14983 1001 aa14.67□□□□□ -0.06
EFNA1-201ENST00000368406 STRNO43815 780 aa14.67□□□□□ -0.06
EFNA1-201ENST00000368406 PFKFB2O60825 505 aa14.67□□□□□ -0.06
EFNA1-201ENST00000368406 ZBED4O75132 1171 aa14.67□□□□□ -0.06
EFNA1-201ENST00000368406 CDKL5O76039 1030 aa14.67□□□□□ -0.06
EFNA1-201ENST00000368406 PLEKHA8P1O95397 391 aa14.67□□□□□ -0.06
EFNA1-201ENST00000368406 LARGE1O95461 756 aa14.67□□□□□ -0.06
EFNA1-201ENST00000368406 SLC25A27O95847 323 aa14.67□□□□□ -0.06
EFNA1-201ENST00000368406 XRCC5P13010 732 aaKnown RBP14.67□□□□□ -0.06
EFNA1-201ENST00000368406 EVCP57679 992 aa14.67□□□□□ -0.06
EFNA1-201ENST00000368406 AKAP17AQ02040 695 aaKnown RBP14.67□□□□□ -0.06
EFNA1-201ENST00000368406 PLS1Q14651 629 aa14.67□□□□□ -0.06
EFNA1-201ENST00000368406 ME3Q16798 604 aa14.67□□□□□ -0.06
EFNA1-201ENST00000368406 MORN1Q5T089 497 aa14.67□□□□□ -0.06
EFNA1-201ENST00000368406 TMTC3Q6ZXV5 915 aa14.67□□□□□ -0.06
EFNA1-201ENST00000368406 HOMER1Q86YM7 354 aa14.67□□□□□ -0.06
EFNA1-201ENST00000368406 CMTR1Q8N1G2 835 aaKnown RBP14.67□□□□□ -0.06
EFNA1-201ENST00000368406 NECAB1Q8N987 351 aa14.67□□□□□ -0.06
EFNA1-201ENST00000368406 SLAIN1Q8ND83 568 aa14.67□□□□□ -0.06
EFNA1-201ENST00000368406 CPVLQ9H3G5 476 aa14.67□□□□□ -0.06
EFNA1-201ENST00000368406 ZNF214Q9UL59 606 aaPredicted RBP14.67□□□□□ -0.06
EFNA1-201ENST00000368406 SLC15A5A6NIM6 579 aa14.66□□□□□ -0.06
EFNA1-201ENST00000368406 CD2BP2O95400 341 aaKnown RBP14.66□□□□□ -0.06
EFNA1-201ENST00000368406 ERCC3P19447 782 aa14.66□□□□□ -0.06
EFNA1-201ENST00000368406 GRK4P32298 578 aa14.66□□□□□ -0.06
EFNA1-201ENST00000368406 COPB2P35606 906 aa14.66□□□□□ -0.06
EFNA1-201ENST00000368406 ANP32AP39687 249 aaKnown RBP14.66□□□□□ -0.06
EFNA1-201ENST00000368406 STAT3P40763 770 aa14.66□□□□□ -0.06
EFNA1-201ENST00000368406 SLC4A3P48751 1232 aa14.66□□□□□ -0.06
EFNA1-201ENST00000368406 OAZ1P54368 228 aa14.66□□□□□ -0.06
EFNA1-201ENST00000368406 CCDC174Q6PII3 467 aa14.66□□□□□ -0.06
EFNA1-201ENST00000368406 RIOX2Q8IUF8 465 aa14.66□□□□□ -0.06
EFNA1-201ENST00000368406 CCDC83Q8IWF9 413 aa14.66□□□□□ -0.06
EFNA1-201ENST00000368406 ADGRF4Q8IZF3 695 aa14.66□□□□□ -0.06
EFNA1-201ENST00000368406 ABRAQ8N0Z2 381 aa14.66□□□□□ -0.06
EFNA1-201ENST00000368406 USP6NLQ92738 828 aa14.66□□□□□ -0.06
EFNA1-201ENST00000368406 GTF3C6Q969F1 213 aa14.66□□□□□ -0.06
EFNA1-201ENST00000368406 RRP36Q96EU6 259 aaKnown RBP14.66□□□□□ -0.06
EFNA1-201ENST00000368406 ZNF333Q96JL9 665 aa14.66□□□□□ -0.06
EFNA1-201ENST00000368406 TEX13BQ9BXU2 312 aa14.66□□□□□ -0.06
EFNA1-201ENST00000368406 SLC38A10Q9HBR0 1119 aa14.66□□□□□ -0.06
EFNA1-201ENST00000368406 PRR12Q9ULL5 1215 aa14.66□□□□□ -0.06
EFNA1-201ENST00000368406 IVNS1ABPQ9Y6Y0 642 aa14.66□□□□□ -0.06
EFNA1-201ENST00000368406 COL11A1P12107 1806 aaPredicted RBP14.66□□□□□ -0.06
EFNA1-201ENST00000368406 MYH6P13533 1939 aa14.66□□□□□ -0.06
EFNA1-201ENST00000368406 ADCY3O60266 1144 aa14.66□□□□□ -0.06
EFNA1-201ENST00000368406 HSP90AA1P07900 732 aaKnown RBP14.66□□□□□ -0.06
EFNA1-201ENST00000368406 PTPREP23469 700 aa14.66□□□□□ -0.06
EFNA1-201ENST00000368406 CDC27P30260 824 aa14.66□□□□□ -0.06
EFNA1-201ENST00000368406 ADD1P35611 737 aaKnown RBP14.66□□□□□ -0.06
EFNA1-201ENST00000368406 SNAP25P60880 206 aa14.66□□□□□ -0.06
EFNA1-201ENST00000368406 SCRN1Q12765 414 aa14.66□□□□□ -0.06
EFNA1-201ENST00000368406 BTNL9Q6UXG8 535 aa14.66□□□□□ -0.06
EFNA1-201ENST00000368406 TRIM22Q8IYM9 498 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms