RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 KIF5BP33176 963 aa12.32□□□□□ -0.44
NECTIN4-201ENST00000368012 CACNB1Q02641 598 aaPredicted RBP12.32□□□□□ -0.44
NECTIN4-201ENST00000368012 PACS2Q86VP3 889 aa12.32□□□□□ -0.44
NECTIN4-201ENST00000368012 NELFCDQ8IXH7 590 aa12.32□□□□□ -0.44
NECTIN4-201ENST00000368012 CRNKL1Q9BZJ0 848 aaKnown RBP12.32□□□□□ -0.44
NECTIN4-201ENST00000368012 BIN2Q9UBW5 565 aaPredicted RBP12.32□□□□□ -0.44
NECTIN4-201ENST00000368012 L1RE1Q9UN81 338 aa12.32□□□□□ -0.44
NECTIN4-201ENST00000368012 XDHP47989 1333 aa12.32□□□□□ -0.44
NECTIN4-201ENST00000368012 LAMA4Q16363 1823 aa12.32□□□□□ -0.44
NECTIN4-201ENST00000368012 EIF3CLB5ME19 914 aaKnown RBP12.32□□□□□ -0.44
NECTIN4-201ENST00000368012 F8W031 263 aaPredicted RBP12.32□□□□□ -0.44
NECTIN4-201ENST00000368012 EBAG9O00559 213 aa12.32□□□□□ -0.44
NECTIN4-201ENST00000368012 ADAMTS3O15072 1205 aa12.32□□□□□ -0.44
NECTIN4-201ENST00000368012 KIAA0754O94854 1291 aa12.32□□□□□ -0.44
NECTIN4-201ENST00000368012 FCER1AP12319 257 aa12.32□□□□□ -0.44
NECTIN4-201ENST00000368012 RASGRP2Q7LDG7 609 aa12.32□□□□□ -0.44
NECTIN4-201ENST00000368012 BLIDQ8IZY5 108 aa12.32□□□□□ -0.44
NECTIN4-201ENST00000368012 EIF3CQ99613 913 aaKnown RBP12.32□□□□□ -0.44
NECTIN4-201ENST00000368012 C1orf167Q5SNV9 1468 aa12.31□□□□□ -0.44
NECTIN4-201ENST00000368012 PRDX5P30044 214 aa12.31□□□□□ -0.44
NECTIN4-201ENST00000368012 GNGT1P63211 74 aa12.31□□□□□ -0.44
NECTIN4-201ENST00000368012 STAG1Q8WVM7 1258 aa12.31□□□□□ -0.44
NECTIN4-201ENST00000368012 GPR101Q96P66 508 aaPredicted RBP12.31□□□□□ -0.44
NECTIN4-201ENST00000368012 NHEJ1Q9H9Q4 299 aaPredicted RBP12.31□□□□□ -0.44
NECTIN4-201ENST00000368012 WDR17Q8IZU2 1322 aa12.31□□□□□ -0.44
NECTIN4-201ENST00000368012 BMP15O95972 392 aa12.31□□□□□ -0.44
NECTIN4-201ENST00000368012 MAGEA1P43355 309 aa12.31□□□□□ -0.44
NECTIN4-201ENST00000368012 RASSF7Q02833 373 aa12.31□□□□□ -0.44
NECTIN4-201ENST00000368012 TCERG1LQ5VWI1 586 aa12.31□□□□□ -0.44
NECTIN4-201ENST00000368012 MAPKAPK5Q8IW41 473 aa12.31□□□□□ -0.44
NECTIN4-201ENST00000368012 MB21D1Q8N884 522 aa12.31□□□□□ -0.44
NECTIN4-201ENST00000368012 CNOT6LQ96LI5 555 aaKnown RBP12.31□□□□□ -0.44
NECTIN4-201ENST00000368012 SEPT11Q9NVA2 429 aaKnown RBP12.31□□□□□ -0.44
NECTIN4-201ENST00000368012 AFDNP55196 1824 aaKnown RBP12.31□□□□□ -0.44
NECTIN4-201ENST00000368012 SARSP49591 514 aaKnown RBP12.31□□□□□ -0.44
NECTIN4-201ENST00000368012 CKAP4Q07065 602 aaKnown RBP12.31□□□□□ -0.44
NECTIN4-201ENST00000368012 PNMA1Q8ND90 353 aa12.31□□□□□ -0.44
NECTIN4-201ENST00000368012 FAM71BQ8TC56 605 aa12.31□□□□□ -0.44
NECTIN4-201ENST00000368012 HAUS4Q9H6D7 363 aa12.31□□□□□ -0.44
NECTIN4-201ENST00000368012 PACSIN2Q9UNF0 486 aaPredicted RBP12.31□□□□□ -0.44
NECTIN4-201ENST00000368012 JRKLQ9Y4A0 524 aa12.31□□□□□ -0.44
NECTIN4-201ENST00000368012 ABCC6O95255 1503 aa12.3□□□□□ -0.44
NECTIN4-201ENST00000368012 RGPD5Q99666 1765 aa12.3□□□□□ -0.44
NECTIN4-201ENST00000368012 NDUFAB1O14561 156 aa12.3□□□□□ -0.44
NECTIN4-201ENST00000368012 TNNI2P48788 182 aa12.3□□□□□ -0.44
NECTIN4-201ENST00000368012 PRPF4BQ13523 1007 aaKnown RBP12.3□□□□□ -0.44
NECTIN4-201ENST00000368012 ZNF658Q5TYW1 1059 aaPredicted RBP12.3□□□□□ -0.44
NECTIN4-201ENST00000368012 NFRKBQ6P4R8 1299 aa12.3□□□□□ -0.44
NECTIN4-201ENST00000368012 CABP7Q86V35 215 aa12.3□□□□□ -0.44
NECTIN4-201ENST00000368012 TCRBV5S4A2TA0A5A2 114 aa12.3□□□□□ -0.44
NECTIN4-201ENST00000368012 SH2D3CQ8N5H7 860 aa12.3□□□□□ -0.44
NECTIN4-201ENST00000368012 SELENOOQ9BVL4 669 aa12.3□□□□□ -0.44
NECTIN4-201ENST00000368012 TMEM60Q9H2L4 133 aa12.3□□□□□ -0.44
NECTIN4-201ENST00000368012 SMIM23A6NLE4 172 aa12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 H7C1D1 291 aa12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 HSF2BPO75031 334 aa12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 PKN1Q16512 942 aa12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 CCDC155Q8N6L0 562 aa12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 ZNF579Q8NAF0 562 aaKnown RBP12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 HDAC7Q8WUI4 952 aa12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 CALML4Q96GE6 196 aa12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 TRIM31Q9BZY9 425 aa12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 SEC63Q9UGP8 760 aaKnown RBP12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 RWDD2AQ9UIY3 292 aa12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 FBXO3Q9UK99 471 aa12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 TRAF5O00463 557 aa12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 PICALMQ13492 652 aa12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 DIXDC1Q155Q3 683 aa12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 IQCEQ6IPM2 695 aa12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 C8orf74Q6P047 294 aa12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 DNAAF5Q86Y56 855 aa12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 TGFBRAP1Q8WUH2 860 aa12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 GJA10Q969M2 543 aa12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 MS4A14Q96JA4 679 aa12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 ALS2CR12Q96Q35 445 aa12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 RBM28Q9NW13 759 aaKnown RBP12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 PRPF3O43395 683 aaKnown RBP12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 FTCDO95954 541 aa12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 PLCG1P19174 1290 aa12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 KLRK1P26718 216 aa12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 IKQ13123 557 aaPredicted RBP12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 PDCLQ13371 301 aa12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 RAPGEF1Q13905 1077 aa12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 CCDC51Q96ER9 411 aa12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 RRP36Q96EU6 259 aaKnown RBP12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 LRRC1Q9BTT6 524 aa12.29□□□□□ -0.44
NECTIN4-201ENST00000368012 CALM1P0DP23 149 aa12.28□□□□□ -0.44
NECTIN4-201ENST00000368012 CALM2P0DP24 149 aa12.28□□□□□ -0.44
NECTIN4-201ENST00000368012 CALM3P0DP25 149 aa12.28□□□□□ -0.44
NECTIN4-201ENST00000368012 TMTC3Q6ZXV5 915 aa12.28□□□□□ -0.44
NECTIN4-201ENST00000368012 PHF20Q9BVI0 1012 aa12.28□□□□□ -0.44
NECTIN4-201ENST00000368012 MPHOSPH10O00566 681 aaKnown RBP12.28□□□□□ -0.44
NECTIN4-201ENST00000368012 BACH1O14867 736 aa12.28□□□□□ -0.44
NECTIN4-201ENST00000368012 CALML3P27482 149 aa12.28□□□□□ -0.44
NECTIN4-201ENST00000368012 EIF4A3P38919 411 aaKnown RBP12.28□□□□□ -0.44
NECTIN4-201ENST00000368012 ICE2Q659A1 982 aa12.28□□□□□ -0.44
NECTIN4-201ENST00000368012 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.28□□□□□ -0.44
NECTIN4-201ENST00000368012 ADAT2Q7Z6V5 191 aaKnown RBP12.28□□□□□ -0.44
NECTIN4-201ENST00000368012 GPCPD1Q9NPB8 672 aa12.28□□□□□ -0.44
NECTIN4-201ENST00000368012 STK36Q9NRP7 1315 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms