RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 SH2B2O14492 632 aaPredicted RBP11.54□□□□□ -0.56
NUP43-202ENST00000367402 PLA2G6O60733 806 aa11.54□□□□□ -0.56
NUP43-202ENST00000367402 GNRH1P01148 92 aa11.54□□□□□ -0.56
NUP43-202ENST00000367402 PARP1P09874 1014 aaKnown RBP11.54□□□□□ -0.56
NUP43-202ENST00000367402 SNHG28P0DPA3 235 aa11.54□□□□□ -0.56
NUP43-202ENST00000367402 CPA1P15085 419 aa11.54□□□□□ -0.56
NUP43-202ENST00000367402 MAPK4P31152 587 aa11.54□□□□□ -0.56
NUP43-202ENST00000367402 EXOSC10Q01780 885 aaKnown RBP11.54□□□□□ -0.56
NUP43-202ENST00000367402 TMEM132BQ14DG7 1078 aa11.54□□□□□ -0.56
NUP43-202ENST00000367402 C8orf34Q49A92 452 aa11.54□□□□□ -0.56
NUP43-202ENST00000367402 GPATCH4Q5T3I0 446 aaKnown RBP11.54□□□□□ -0.56
NUP43-202ENST00000367402 BLOC1S2Q6QNY1 142 aa11.54□□□□□ -0.56
NUP43-202ENST00000367402 CATIPQ7Z7H3 387 aa11.54□□□□□ -0.56
NUP43-202ENST00000367402 CPXCR1Q8N123 301 aa11.54□□□□□ -0.56
NUP43-202ENST00000367402 TCEANC2Q96MN5 208 aa11.54□□□□□ -0.56
NUP43-202ENST00000367402 SPATC1LQ9H0A9 340 aa11.54□□□□□ -0.56
NUP43-202ENST00000367402 PORCNQ9H237 461 aa11.54□□□□□ -0.56
NUP43-202ENST00000367402 LY9Q9HBG7 655 aa11.54□□□□□ -0.56
NUP43-202ENST00000367402 CASTP20810 708 aaKnown RBP11.53□□□□□ -0.56
NUP43-202ENST00000367402 STAT3P40763 770 aa11.53□□□□□ -0.56
NUP43-202ENST00000367402 LIFRP42702 1097 aa11.53□□□□□ -0.56
NUP43-202ENST00000367402 SNAP25P60880 206 aa11.53□□□□□ -0.56
NUP43-202ENST00000367402 PKN2Q16513 984 aaKnown RBP11.53□□□□□ -0.56
NUP43-202ENST00000367402 ASPRV1Q53RT3 343 aa11.53□□□□□ -0.56
NUP43-202ENST00000367402 SYDE2Q5VT97 1194 aa11.53□□□□□ -0.56
NUP43-202ENST00000367402 BTNL9Q6UXG8 535 aa11.53□□□□□ -0.56
NUP43-202ENST00000367402 NCAPG2Q86XI2 1143 aa11.53□□□□□ -0.56
NUP43-202ENST00000367402 NUP133Q8WUM0 1156 aa11.53□□□□□ -0.56
NUP43-202ENST00000367402 MOV10L1Q9BXT6 1211 aaKnown RBP11.53□□□□□ -0.56
NUP43-202ENST00000367402 UBA5Q9GZZ9 404 aa11.53□□□□□ -0.56
NUP43-202ENST00000367402 SLC38A10Q9HBR0 1119 aa11.53□□□□□ -0.56
NUP43-202ENST00000367402 RAVER2Q9HCJ3 691 aaKnown RBP11.53□□□□□ -0.56
NUP43-202ENST00000367402 PRR12Q9ULL5 1215 aa11.53□□□□□ -0.56
NUP43-202ENST00000367402 PTPN22Q9Y2R2 807 aa11.53□□□□□ -0.56
NUP43-202ENST00000367402 SLC12A7Q9Y666 1083 aa11.53□□□□□ -0.56
NUP43-202ENST00000367402 WDR19Q8NEZ3 1342 aa11.53□□□□□ -0.56
NUP43-202ENST00000367402 DHX16O60231 1041 aaKnown RBP11.52□□□□□ -0.57
NUP43-202ENST00000367402 SLC25A27O95847 323 aa11.52□□□□□ -0.57
NUP43-202ENST00000367402 FDX1P10109 184 aa11.52□□□□□ -0.57
NUP43-202ENST00000367402 ERCC3P19447 782 aa11.52□□□□□ -0.57
NUP43-202ENST00000367402 RPS6KB1P23443 525 aa11.52□□□□□ -0.57
NUP43-202ENST00000367402 PRKCZQ05513 592 aa11.52□□□□□ -0.57
NUP43-202ENST00000367402 SNRNP48Q6IEG0 339 aaKnown RBP11.52□□□□□ -0.57
NUP43-202ENST00000367402 CCDC174Q6PII3 467 aa11.52□□□□□ -0.57
NUP43-202ENST00000367402 SYNE3Q6ZMZ3 975 aa11.52□□□□□ -0.57
NUP43-202ENST00000367402 Q6ZUG5 572 aa11.52□□□□□ -0.57
NUP43-202ENST00000367402 GPR142Q7Z601 462 aa11.52□□□□□ -0.57
NUP43-202ENST00000367402 PLEKHH3Q7Z736 793 aa11.52□□□□□ -0.57
NUP43-202ENST00000367402 ZNF654Q8IZM8 581 aa11.52□□□□□ -0.57
NUP43-202ENST00000367402 TNS4Q8IZW8 715 aa11.52□□□□□ -0.57
NUP43-202ENST00000367402 REPS2Q8NFH8 660 aa11.52□□□□□ -0.57
NUP43-202ENST00000367402 MYL10Q9BUA6 226 aa11.52□□□□□ -0.57
NUP43-202ENST00000367402 TEX13BQ9BXU2 312 aa11.52□□□□□ -0.57
NUP43-202ENST00000367402 MCOLN1Q9GZU1 580 aa11.52□□□□□ -0.57
NUP43-202ENST00000367402 CPVLQ9H3G5 476 aa11.52□□□□□ -0.57
NUP43-202ENST00000367402 MROH8Q9H579 483 aa11.52□□□□□ -0.57
NUP43-202ENST00000367402 VAT1LQ9HCJ6 419 aa11.52□□□□□ -0.57
NUP43-202ENST00000367402 SRRDQ9UH36 339 aa11.52□□□□□ -0.57
NUP43-202ENST00000367402 IVNS1ABPQ9Y6Y0 642 aa11.52□□□□□ -0.57
NUP43-202ENST00000367402 ATP2A1O14983 1001 aa11.51□□□□□ -0.57
NUP43-202ENST00000367402 DDAH1O94760 285 aa11.51□□□□□ -0.57
NUP43-202ENST00000367402 FLT3LGP49771 235 aa11.51□□□□□ -0.57
NUP43-202ENST00000367402 OAZ1P54368 228 aa11.51□□□□□ -0.57
NUP43-202ENST00000367402 PRMT2P55345 433 aa11.51□□□□□ -0.57
NUP43-202ENST00000367402 TROAPQ12815 778 aa11.51□□□□□ -0.57
NUP43-202ENST00000367402 GRM4Q14833 912 aa11.51□□□□□ -0.57
NUP43-202ENST00000367402 FBXO46Q6PJ61 603 aaPredicted RBP11.51□□□□□ -0.57
NUP43-202ENST00000367402 RUFY3Q7L099 469 aa11.51□□□□□ -0.57
NUP43-202ENST00000367402 RAB11FIP4Q86YS3 637 aa11.51□□□□□ -0.57
NUP43-202ENST00000367402 RIOX2Q8IUF8 465 aa11.51□□□□□ -0.57
NUP43-202ENST00000367402 STAG2Q8N3U4 1231 aa11.51□□□□□ -0.57
NUP43-202ENST00000367402 SHCBP1Q8NEM2 672 aa11.51□□□□□ -0.57
NUP43-202ENST00000367402 CTCFLQ8NI51 663 aaPredicted RBP11.51□□□□□ -0.57
NUP43-202ENST00000367402 RAET1EQ8TD07 263 aa11.51□□□□□ -0.57
NUP43-202ENST00000367402 NUDT12Q9BQG2 462 aa11.51□□□□□ -0.57
NUP43-202ENST00000367402 ZSWIM6Q9HCJ5 1215 aa11.51□□□□□ -0.57
NUP43-202ENST00000367402 MAD2L2Q9UI95 211 aa11.51□□□□□ -0.57
NUP43-202ENST00000367402 ZNF214Q9UL59 606 aaPredicted RBP11.51□□□□□ -0.57
NUP43-202ENST00000367402 NAP1L2Q9ULW6 460 aaPredicted RBP11.51□□□□□ -0.57
NUP43-202ENST00000367402 GABRQQ9UN88 632 aa11.51□□□□□ -0.57
NUP43-202ENST00000367402 CYP46A1Q9Y6A2 500 aa11.51□□□□□ -0.57
NUP43-202ENST00000367402 CASP8AP2Q9UKL3 1982 aa11.5□□□□□ -0.57
NUP43-202ENST00000367402 PALM3A6NDB9 673 aaPredicted RBP11.5□□□□□ -0.57
NUP43-202ENST00000367402 KLRF2D3W0D1 207 aa11.5□□□□□ -0.57
NUP43-202ENST00000367402 CALM1P0DP23 149 aa11.5□□□□□ -0.57
NUP43-202ENST00000367402 CALM2P0DP24 149 aa11.5□□□□□ -0.57
NUP43-202ENST00000367402 CALM3P0DP25 149 aa11.5□□□□□ -0.57
NUP43-202ENST00000367402 COPB2P35606 906 aa11.5□□□□□ -0.57
NUP43-202ENST00000367402 ANAPC15P60006 121 aa11.5□□□□□ -0.57
NUP43-202ENST00000367402 SGMS1Q86VZ5 419 aa11.5□□□□□ -0.57
NUP43-202ENST00000367402 CCDC144CPQ8IYA2 1237 aa11.5□□□□□ -0.57
NUP43-202ENST00000367402 ADGRF4Q8IZF3 695 aa11.5□□□□□ -0.57
NUP43-202ENST00000367402 BRF1Q92994 677 aa11.5□□□□□ -0.57
NUP43-202ENST00000367402 AGBL1Q96MI9 1066 aa11.5□□□□□ -0.57
NUP43-202ENST00000367402 UPF3BQ9BZI7 483 aaKnown RBP11.5□□□□□ -0.57
NUP43-202ENST00000367402 TM6SF1Q9BZW5 370 aa11.5□□□□□ -0.57
NUP43-202ENST00000367402 RANBP17Q9H2T7 1088 aaKnown RBP11.5□□□□□ -0.57
NUP43-202ENST00000367402 HOMER2Q9NSB8 354 aa11.5□□□□□ -0.57
NUP43-202ENST00000367402 RIPK3Q9Y572 518 aa11.5□□□□□ -0.57
NUP43-202ENST00000367402 PTCH2Q9Y6C5 1203 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms