RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 FOXP2O15409 715 aa17.52■□□□□ 0.4
CTSD-202ENST00000367196 ADAMTS4O75173 837 aa17.52■□□□□ 0.4
CTSD-202ENST00000367196 DUSP11O75319 330 aaKnown RBP17.52■□□□□ 0.4
CTSD-202ENST00000367196 SNAI1O95863 264 aaPredicted RBP17.52■□□□□ 0.4
CTSD-202ENST00000367196 ACVR2BQ13705 512 aa17.52■□□□□ 0.4
CTSD-202ENST00000367196 VPS53Q5VIR6 699 aa17.52■□□□□ 0.4
CTSD-202ENST00000367196 RCSD1Q6JBY9 416 aa17.52■□□□□ 0.4
CTSD-202ENST00000367196 PCSK9Q8NBP7 692 aaKnown RBP17.52■□□□□ 0.4
CTSD-202ENST00000367196 DCAF4Q8WV16 495 aa17.52■□□□□ 0.4
CTSD-202ENST00000367196 LNPKQ9C0E8 428 aa17.52■□□□□ 0.4
CTSD-202ENST00000367196 PDLIM7Q9NR12 457 aa17.52■□□□□ 0.4
CTSD-202ENST00000367196 RNF146Q9NTX7 359 aa17.52■□□□□ 0.4
CTSD-202ENST00000367196 DNAH12Q6ZR08 3092 aa17.52■□□□□ 0.39
CTSD-202ENST00000367196 MROH7Q68CQ1 1323 aa17.51■□□□□ 0.39
CTSD-202ENST00000367196 A0A0D9SFI3 127 aa17.51■□□□□ 0.39
CTSD-202ENST00000367196 ASB14A6NK59 587 aa17.51■□□□□ 0.39
CTSD-202ENST00000367196 CLTBP09497 229 aa17.51■□□□□ 0.39
CTSD-202ENST00000367196 FGRP09769 529 aa17.51■□□□□ 0.39
CTSD-202ENST00000367196 NT5C2P49902 561 aa17.51■□□□□ 0.39
CTSD-202ENST00000367196 CCDC96Q2M329 555 aa17.51■□□□□ 0.39
CTSD-202ENST00000367196 KCTD1Q719H9 257 aa17.51■□□□□ 0.39
CTSD-202ENST00000367196 ARMCX2Q7L311 632 aa17.51■□□□□ 0.39
CTSD-202ENST00000367196 STARD7Q9NQZ5 370 aa17.51■□□□□ 0.39
CTSD-202ENST00000367196 IL17RBQ9NRM6 502 aa17.51■□□□□ 0.39
CTSD-202ENST00000367196 MCM3APO60318 1980 aa17.51■□□□□ 0.39
CTSD-202ENST00000367196 CCDC171Q6TFL3 1326 aa17.5■□□□□ 0.39
CTSD-202ENST00000367196 FGAP02671 866 aa17.5■□□□□ 0.39
CTSD-202ENST00000367196 HSPD1P10809 573 aaKnown RBP17.5■□□□□ 0.39
CTSD-202ENST00000367196 TOP1P11387 765 aaKnown RBP17.5■□□□□ 0.39
CTSD-202ENST00000367196 CST5P28325 142 aaPredicted RBP17.5■□□□□ 0.39
CTSD-202ENST00000367196 NOVP48745 357 aa17.5■□□□□ 0.39
CTSD-202ENST00000367196 ACLYP53396 1101 aa17.5■□□□□ 0.39
CTSD-202ENST00000367196 TLE2Q04725 743 aa17.5■□□□□ 0.39
CTSD-202ENST00000367196 RRP12Q5JTH9 1297 aaKnown RBP17.5■□□□□ 0.39
CTSD-202ENST00000367196 SMC5Q8IY18 1101 aa17.5■□□□□ 0.39
CTSD-202ENST00000367196 RILPL2Q969X0 211 aa17.5■□□□□ 0.39
CTSD-202ENST00000367196 FAM227BQ96M60 508 aa17.5■□□□□ 0.39
CTSD-202ENST00000367196 GLT1D1Q96MS3 346 aa17.5■□□□□ 0.39
CTSD-202ENST00000367196 YTHDC1Q96MU7 727 aaKnown RBP17.5■□□□□ 0.39
CTSD-202ENST00000367196 TRERF1Q96PN7 1200 aa17.5■□□□□ 0.39
CTSD-202ENST00000367196 RNF41Q9H4P4 317 aaPredicted RBP17.5■□□□□ 0.39
CTSD-202ENST00000367196 A1CFQ9NQ94 594 aaKnown RBP17.5■□□□□ 0.39
CTSD-202ENST00000367196 PNMA2Q9UL42 364 aa17.5■□□□□ 0.39
CTSD-202ENST00000367196 ZNF536O15090 1300 aa17.49■□□□□ 0.39
CTSD-202ENST00000367196 DCDC2CA8MYV0 355 aa17.49■□□□□ 0.39
CTSD-202ENST00000367196 NMT2O60551 498 aa17.49■□□□□ 0.39
CTSD-202ENST00000367196 C6orf222P0C671 652 aaPredicted RBP17.49■□□□□ 0.39
CTSD-202ENST00000367196 ALAS1P13196 640 aa17.49■□□□□ 0.39
CTSD-202ENST00000367196 NMIQ13287 307 aaPredicted RBP17.49■□□□□ 0.39
CTSD-202ENST00000367196 CCDC144BQ3MJ40 725 aa17.49■□□□□ 0.39
CTSD-202ENST00000367196 CCDC174Q6PII3 467 aa17.49■□□□□ 0.39
CTSD-202ENST00000367196 CCDC144CPQ8IYA2 1237 aa17.49■□□□□ 0.39
CTSD-202ENST00000367196 FAM133AQ8N9E0 248 aa17.49■□□□□ 0.39
CTSD-202ENST00000367196 KLHDC9Q8NEP7 349 aa17.49■□□□□ 0.39
CTSD-202ENST00000367196 BADQ92934 168 aa17.49■□□□□ 0.39
CTSD-202ENST00000367196 LENG1Q96BZ8 264 aaPredicted RBP17.49■□□□□ 0.39
CTSD-202ENST00000367196 AGBL1Q96MI9 1066 aa17.49■□□□□ 0.39
CTSD-202ENST00000367196 TOX2Q96NM4 488 aa17.49■□□□□ 0.39
CTSD-202ENST00000367196 TCP11L1Q9NUJ3 509 aa17.49■□□□□ 0.39
CTSD-202ENST00000367196 CCPG1Q9ULG6 757 aa17.49■□□□□ 0.39
CTSD-202ENST00000367196 PRR12Q9ULL5 1215 aa17.49■□□□□ 0.39
CTSD-202ENST00000367196 MTMR7Q9Y216 660 aa17.49■□□□□ 0.39
CTSD-202ENST00000367196 ELP1O95163 1332 aa17.48■□□□□ 0.39
CTSD-202ENST00000367196 PQBP1O60828 265 aaKnown RBP17.48■□□□□ 0.39
CTSD-202ENST00000367196 ICAM1P05362 532 aa17.48■□□□□ 0.39
CTSD-202ENST00000367196 KCNA10Q16322 511 aa17.48■□□□□ 0.39
CTSD-202ENST00000367196 FAM109BQ6ICB4 259 aaPredicted RBP17.48■□□□□ 0.39
CTSD-202ENST00000367196 MFSD6Q6ZSS7 791 aa17.48■□□□□ 0.39
CTSD-202ENST00000367196 ANKRD33Q7Z3H0 272 aa17.48■□□□□ 0.39
CTSD-202ENST00000367196 CHD1LQ86WJ1 897 aa17.48■□□□□ 0.39
CTSD-202ENST00000367196 OSBPL3Q9H4L5 887 aa17.48■□□□□ 0.39
CTSD-202ENST00000367196 HIP1O00291 1037 aa17.47■□□□□ 0.39
CTSD-202ENST00000367196 RAG1P15918 1043 aa17.47■□□□□ 0.39
CTSD-202ENST00000367196 GJA9P57773 515 aa17.47■□□□□ 0.39
CTSD-202ENST00000367196 AKNAD1Q5T1N1 836 aa17.47■□□□□ 0.39
CTSD-202ENST00000367196 B4GALNT3Q6L9W6 998 aa17.47■□□□□ 0.39
CTSD-202ENST00000367196 ZNF589Q86UQ0 364 aaPredicted RBP17.47■□□□□ 0.39
CTSD-202ENST00000367196 CHMP4CQ96CF2 233 aa17.47■□□□□ 0.39
CTSD-202ENST00000367196 FGD4Q96M96 766 aa17.47■□□□□ 0.39
CTSD-202ENST00000367196 TTC14Q96N46 770 aa17.47■□□□□ 0.39
CTSD-202ENST00000367196 UPF3AQ9H1J1 476 aaKnown RBP17.47■□□□□ 0.39
CTSD-202ENST00000367196 INCENPQ9NQS7 918 aa17.47■□□□□ 0.39
CTSD-202ENST00000367196 TMEM39AQ9NV64 488 aa17.47■□□□□ 0.39
CTSD-202ENST00000367196 STXBP5LQ9Y2K9 1186 aa17.47■□□□□ 0.39
CTSD-202ENST00000367196 TRIM43BA6NCK2 446 aa17.46■□□□□ 0.39
CTSD-202ENST00000367196 KIAA0355O15063 1070 aa17.46■□□□□ 0.39
CTSD-202ENST00000367196 CNTN2Q02246 1040 aa17.46■□□□□ 0.39
CTSD-202ENST00000367196 SYDE2Q5VT97 1194 aa17.46■□□□□ 0.39
CTSD-202ENST00000367196 CCSAPQ6IQ19 270 aaPredicted RBP17.46■□□□□ 0.39
CTSD-202ENST00000367196 BTNL9Q6UXG8 535 aa17.46■□□□□ 0.39
CTSD-202ENST00000367196 NOL8Q76FK4 1167 aaKnown RBP17.46■□□□□ 0.39
CTSD-202ENST00000367196 Q7L0L9 218 aa17.46■□□□□ 0.39
CTSD-202ENST00000367196 ESR2Q92731 530 aa17.46■□□□□ 0.39
CTSD-202ENST00000367196 TRIM43Q96BQ3 446 aaPredicted RBP17.46■□□□□ 0.39
CTSD-202ENST00000367196 TMEM47Q9BQJ4 181 aa17.46■□□□□ 0.39
CTSD-202ENST00000367196 RANBP17Q9H2T7 1088 aaKnown RBP17.46■□□□□ 0.39
CTSD-202ENST00000367196 DIAPH3Q9NSV4 1193 aa17.46■□□□□ 0.39
CTSD-202ENST00000367196 MTMR10Q9NXD2 777 aa17.46■□□□□ 0.39
CTSD-202ENST00000367196 CYP39A1Q9NYL5 469 aa17.46■□□□□ 0.39
CTSD-202ENST00000367196 ADD3Q9UEY8 706 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms