RNA–Protein interactions for RNA: ENST00000366860.9

CNIH4-204, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 3

Gene CNIH4, Length 912 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-204ENST00000366860 HOXC10Q9NYD6 342 aa18.08■□□□□ 0.48
CNIH4-204ENST00000366860 SPDYE16A6NNV3 312 aaPredicted RBP18.07■□□□□ 0.48
CNIH4-204ENST00000366860 SCG2P13521 617 aa18.07■□□□□ 0.48
CNIH4-204ENST00000366860 PFKFB3Q16875 520 aaPredicted RBP18.07■□□□□ 0.48
CNIH4-204ENST00000366860 SLC35G1Q2M3R5 365 aa18.07■□□□□ 0.48
CNIH4-204ENST00000366860 OTUD7BQ6GQQ9 843 aa18.07■□□□□ 0.48
CNIH4-204ENST00000366860 PPP1R18Q6NYC8 613 aa18.07■□□□□ 0.48
CNIH4-204ENST00000366860 LBX2Q6XYB7 198 aa18.07■□□□□ 0.48
CNIH4-204ENST00000366860 RGS22Q8NE09 1264 aa18.07■□□□□ 0.48
CNIH4-204ENST00000366860 CCDC148Q8NFR7 591 aa18.07■□□□□ 0.48
CNIH4-204ENST00000366860 CCDC12Q8WUD4 166 aaPredicted RBP18.07■□□□□ 0.48
CNIH4-204ENST00000366860 CAPNS2Q96L46 248 aa18.07■□□□□ 0.48
CNIH4-204ENST00000366860 CPVLQ9H3G5 476 aa18.07■□□□□ 0.48
CNIH4-204ENST00000366860 FBXO28Q9NVF7 368 aa18.07■□□□□ 0.48
CNIH4-204ENST00000366860 PNMA6FA0A0J9YX94 578 aa18.06■□□□□ 0.48
CNIH4-204ENST00000366860 OAZ1P54368 228 aa18.06■□□□□ 0.48
CNIH4-204ENST00000366860 TRIM29Q14134 588 aa18.06■□□□□ 0.48
CNIH4-204ENST00000366860 CYP4F22Q6NT55 531 aa18.06■□□□□ 0.48
CNIH4-204ENST00000366860 GPAT2Q6NUI2 795 aa18.06■□□□□ 0.48
CNIH4-204ENST00000366860 PIGSQ96S52 555 aa18.06■□□□□ 0.48
CNIH4-204ENST00000366860 ASCC2Q9H1I8 757 aaPredicted RBP18.06■□□□□ 0.48
CNIH4-204ENST00000366860 SLC38A10Q9HBR0 1119 aa18.06■□□□□ 0.48
CNIH4-204ENST00000366860 VAT1LQ9HCJ6 419 aa18.06■□□□□ 0.48
CNIH4-204ENST00000366860 V9GY48 417 aaPredicted RBP18.06■□□□□ 0.48
CNIH4-204ENST00000366860 BTBD19C9JJ37 291 aa18.05■□□□□ 0.48
CNIH4-204ENST00000366860 PDHXO00330 501 aa18.05■□□□□ 0.48
CNIH4-204ENST00000366860 VWA5AO00534 786 aa18.05■□□□□ 0.48
CNIH4-204ENST00000366860 ZBED4O75132 1171 aa18.05■□□□□ 0.48
CNIH4-204ENST00000366860 QRICH1Q2TAL8 776 aa18.05■□□□□ 0.48
CNIH4-204ENST00000366860 SMCR8Q8TEV9 937 aaPredicted RBP18.05■□□□□ 0.48
CNIH4-204ENST00000366860 ATG4CQ96DT6 458 aa18.05■□□□□ 0.48
CNIH4-204ENST00000366860 ALG1Q9BT22 464 aa18.05■□□□□ 0.48
CNIH4-204ENST00000366860 AMNQ9BXJ7 453 aa18.05■□□□□ 0.48
CNIH4-204ENST00000366860 SH3GLB2Q9NR46 395 aa18.05■□□□□ 0.48
CNIH4-204ENST00000366860 FDPSP14324 419 aaKnown RBP18.04■□□□□ 0.48
CNIH4-204ENST00000366860 SLC4A3P48751 1232 aa18.04■□□□□ 0.48
CNIH4-204ENST00000366860 HERVK_113P62684 666 aa18.04■□□□□ 0.48
CNIH4-204ENST00000366860 GRM1Q13255 1194 aa18.04■□□□□ 0.48
CNIH4-204ENST00000366860 HEATR3Q7Z4Q2 680 aa18.04■□□□□ 0.48
CNIH4-204ENST00000366860 FBXO11Q86XK2 927 aa18.04■□□□□ 0.48
CNIH4-204ENST00000366860 SPRYD3Q8NCJ5 442 aa18.04■□□□□ 0.48
CNIH4-204ENST00000366860 PIBF1Q8WXW3 757 aa18.04■□□□□ 0.48
CNIH4-204ENST00000366860 C8orf76Q96K31 380 aa18.04■□□□□ 0.48
CNIH4-204ENST00000366860 BARHL2Q9NY43 387 aa18.04■□□□□ 0.48
CNIH4-204ENST00000366860 ADAMTS5Q9UNA0 930 aa18.04■□□□□ 0.48
CNIH4-204ENST00000366860 ATP2A1O14983 1001 aa18.03■□□□□ 0.48
CNIH4-204ENST00000366860 PPFIA3O75145 1194 aa18.03■□□□□ 0.48
CNIH4-204ENST00000366860 ALDH1A1P00352 501 aa18.03■□□□□ 0.48
CNIH4-204ENST00000366860 ICAM1P05362 532 aa18.03■□□□□ 0.48
CNIH4-204ENST00000366860 COPB2P35606 906 aa18.03■□□□□ 0.48
CNIH4-204ENST00000366860 GCLCP48506 637 aaPredicted RBP18.03■□□□□ 0.48
CNIH4-204ENST00000366860 PKN1Q16512 942 aa18.03■□□□□ 0.48
CNIH4-204ENST00000366860 TEX2Q8IWB9 1127 aa18.03■□□□□ 0.48
CNIH4-204ENST00000366860 FAM43AQ8N2R8 423 aa18.03■□□□□ 0.48
CNIH4-204ENST00000366860 TEX13BQ9BXU2 312 aa18.03■□□□□ 0.48
CNIH4-204ENST00000366860 ABCB11O95342 1321 aa18.02■□□□□ 0.48
CNIH4-204ENST00000366860 hCG_1642624A0A1W2PR95 340 aa18.02■□□□□ 0.48
CNIH4-204ENST00000366860 HSPA6P17066 643 aa18.02■□□□□ 0.48
CNIH4-204ENST00000366860 NAPAP54920 295 aa18.02■□□□□ 0.48
CNIH4-204ENST00000366860 C1QTNF8P60827 252 aa18.02■□□□□ 0.48
CNIH4-204ENST00000366860 WWC2Q6AWC2 1192 aa18.02■□□□□ 0.48
CNIH4-204ENST00000366860 CCDC174Q6PII3 467 aa18.02■□□□□ 0.48
CNIH4-204ENST00000366860 IFNL1Q8IU54 200 aa18.02■□□□□ 0.48
CNIH4-204ENST00000366860 GPKOWQ92917 476 aaPredicted RBP eCLIP18.02■□□□□ 0.48
CNIH4-204ENST00000366860 GLT8D2Q9H1C3 349 aa18.02■□□□□ 0.48
CNIH4-204ENST00000366860 BRMS1Q9HCU9 246 aa18.02■□□□□ 0.48
CNIH4-204ENST00000366860 CCPG1Q9ULG6 757 aa18.02■□□□□ 0.48
CNIH4-204ENST00000366860 WDR33Q9C0J8 1336 aaKnown RBP18.01■□□□□ 0.47
CNIH4-204ENST00000366860 ESYT2A0FGR8 921 aa18.01■□□□□ 0.47
CNIH4-204ENST00000366860 H3BQV1 296 aa18.01■□□□□ 0.47
CNIH4-204ENST00000366860 IGF2BP3O00425 579 aaKnown RBP eCLIP18.01■□□□□ 0.47
CNIH4-204ENST00000366860 CALML3P27482 149 aa18.01■□□□□ 0.47
CNIH4-204ENST00000366860 MAP2K2P36507 400 aa18.01■□□□□ 0.47
CNIH4-204ENST00000366860 TM4SF4P48230 202 aa18.01■□□□□ 0.47
CNIH4-204ENST00000366860 KIF23Q02241 960 aaPredicted RBP18.01■□□□□ 0.47
CNIH4-204ENST00000366860 IFFO2Q5TF58 517 aa18.01■□□□□ 0.47
CNIH4-204ENST00000366860 LARP1BQ659C4 914 aaKnown RBP18.01■□□□□ 0.47
CNIH4-204ENST00000366860 GALNT17Q6IS24 598 aa18.01■□□□□ 0.47
CNIH4-204ENST00000366860 REPS2Q8NFH8 660 aa18.01■□□□□ 0.47
CNIH4-204ENST00000366860 P2RX7Q99572 595 aaKnown RBP18.01■□□□□ 0.47
CNIH4-204ENST00000366860 PTPN18Q99952 460 aa18.01■□□□□ 0.47
CNIH4-204ENST00000366860 ZNF214Q9UL59 606 aaPredicted RBP18.01■□□□□ 0.47
CNIH4-204ENST00000366860 CIZ1Q9ULV3 898 aaPredicted RBP18.01■□□□□ 0.47
CNIH4-204ENST00000366860 RABGAP1Q9Y3P9 1069 aa18.01■□□□□ 0.47
CNIH4-204ENST00000366860 PCDHA1Q9Y5I3 950 aa18.01■□□□□ 0.47
CNIH4-204ENST00000366860 MYH15Q9Y2K3 1946 aa18■□□□□ 0.47
CNIH4-204ENST00000366860 STXBP3O00186 592 aa18■□□□□ 0.47
CNIH4-204ENST00000366860 SAFBQ15424 915 aaKnown RBP eCLIP18■□□□□ 0.47
CNIH4-204ENST00000366860 TAF1CQ15572 869 aaPredicted RBP18■□□□□ 0.47
CNIH4-204ENST00000366860 TKFCQ3LXA3 575 aa18■□□□□ 0.47
CNIH4-204ENST00000366860 USH1GQ495M9 461 aa18■□□□□ 0.47
CNIH4-204ENST00000366860 VPS54Q9P1Q0 977 aa18■□□□□ 0.47
CNIH4-204ENST00000366860 ZNF536O15090 1300 aa17.99■□□□□ 0.47
CNIH4-204ENST00000366860 PPP1R11O60927 126 aaPredicted RBP17.99■□□□□ 0.47
CNIH4-204ENST00000366860 CYP2C8P10632 490 aa17.99■□□□□ 0.47
CNIH4-204ENST00000366860 GNA11P29992 359 aa17.99■□□□□ 0.47
CNIH4-204ENST00000366860 TMEM132BQ14DG7 1078 aa17.99■□□□□ 0.47
CNIH4-204ENST00000366860 SNRNP48Q6IEG0 339 aaKnown RBP17.99■□□□□ 0.47
CNIH4-204ENST00000366860 CPXCR1Q8N123 301 aa17.99■□□□□ 0.47
CNIH4-204ENST00000366860 FBXO18Q8NFZ0 1043 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms