RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 ABL1P00519 1130 aa12.08□□□□□ -0.48
CDC42BPA-205ENST00000366769 HOMER3Q9NSC5 361 aa12.08□□□□□ -0.48
CDC42BPA-205ENST00000366769 BAG5Q9UL15 447 aa12.08□□□□□ -0.48
CDC42BPA-205ENST00000366769 FAM83GA6ND36 823 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 CASP2P42575 452 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 APBA1Q02410 837 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 SLC20A2Q08357 652 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 OSCARQ8IYS5 282 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 GABPB2Q8TAK5 448 aaPredicted RBP12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 ZNF229Q9UJW7 825 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 KRT75O95678 551 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 TNFAIP3P21580 790 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 DLGAP2Q9P1A6 1054 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 EEF1B2P24534 225 aaKnown RBP12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 MAEAQ7L5Y9 396 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 RIOK1Q9BRS2 568 aaKnown RBP12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 FAM207AQ9NSI2 230 aaPredicted RBP12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 ZBTB40Q9NUA8 1239 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 ATP8A1Q9Y2Q0 1164 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 HYOU1Q9Y4L1 999 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 RGS12O14924 1447 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 KRT23Q9C075 422 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 MCM8Q9UJA3 840 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 PMS1P54277 932 aaKnown RBP12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 ESRRGP62508 458 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 EHHADHQ08426 723 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 SCRN1Q12765 414 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 KRT79Q5XKE5 535 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 ESR2Q92731 530 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 EPB41L5Q9HCM4 733 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 GPHNQ9NQX3 736 aaPredicted RBP12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 TRAF5O00463 557 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 DPCR1Q3MIW9 517 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 EPN3Q9H201 632 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 MORC3Q14149 939 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 PAK1Q13153 545 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 HP1BP3Q5SSJ5 553 aaPredicted RBP12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 HDAC6Q9UBN7 1215 aa12.07□□□□□ -0.48
CDC42BPA-205ENST00000366769 SART1O43290 800 aaKnown RBP12.06□□□□□ -0.48
CDC42BPA-205ENST00000366769 MECOMQ03112 1051 aa12.06□□□□□ -0.48
CDC42BPA-205ENST00000366769 CCDC144BQ3MJ40 725 aa12.06□□□□□ -0.48
CDC42BPA-205ENST00000366769 IRX4P78413 519 aa12.06□□□□□ -0.48
CDC42BPA-205ENST00000366769 TSKSQ9UJT2 592 aa12.06□□□□□ -0.48
CDC42BPA-205ENST00000366769 DAAM1Q9Y4D1 1078 aa12.06□□□□□ -0.48
CDC42BPA-205ENST00000366769 TRIM75PA6NK02 468 aa12.06□□□□□ -0.48
CDC42BPA-205ENST00000366769 SAT1P21673 171 aa12.06□□□□□ -0.48
CDC42BPA-205ENST00000366769 MTRQ99707 1265 aa12.06□□□□□ -0.48
CDC42BPA-205ENST00000366769 CCDC68Q9H2F9 335 aa12.06□□□□□ -0.48
CDC42BPA-205ENST00000366769 ZNF408Q9H9D4 720 aa12.06□□□□□ -0.48
CDC42BPA-205ENST00000366769 PRXQ9BXM0 1461 aa12.06□□□□□ -0.48
CDC42BPA-205ENST00000366769 RRP36Q96EU6 259 aaKnown RBP12.06□□□□□ -0.48
CDC42BPA-205ENST00000366769 NDEL1Q9GZM8 345 aa12.06□□□□□ -0.48
CDC42BPA-205ENST00000366769 BLZF1Q9H2G9 400 aa12.06□□□□□ -0.48
CDC42BPA-205ENST00000366769 LPXNO60711 386 aa12.06□□□□□ -0.48
CDC42BPA-205ENST00000366769 ASIC2Q16515 512 aa12.06□□□□□ -0.48
CDC42BPA-205ENST00000366769 SFMBT2Q5VUG0 894 aa12.06□□□□□ -0.48
CDC42BPA-205ENST00000366769 ZCRB1Q8TBF4 217 aaKnown RBP12.06□□□□□ -0.48
CDC42BPA-205ENST00000366769 MYSM1Q5VVJ2 828 aa12.06□□□□□ -0.48
CDC42BPA-205ENST00000366769 RRAGAQ7L523 313 aa12.06□□□□□ -0.48
CDC42BPA-205ENST00000366769 PFKFB1P16118 471 aa12.06□□□□□ -0.48
CDC42BPA-205ENST00000366769 CASP14P31944 242 aa12.06□□□□□ -0.48
CDC42BPA-205ENST00000366769 PARD3BQ8TEW8 1205 aa12.06□□□□□ -0.48
CDC42BPA-205ENST00000366769 PLEKHG2Q9H7P9 1386 aa12.06□□□□□ -0.48
CDC42BPA-205ENST00000366769 KIF20BQ96Q89 1820 aa12.06□□□□□ -0.48
CDC42BPA-205ENST00000366769 SPAG7O75391 227 aa12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 LONP1P36776 959 aaKnown RBP12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 CWF19L2Q2TBE0 894 aaKnown RBP12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 ZFATQ9P243 1243 aa12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 SPDYE2BA6NHP3 402 aa12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 MAFGO15525 162 aa12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 SPDYE6P0CI01 402 aa12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 SPC25Q9HBM1 224 aa12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 DDX28Q9NUL7 540 aaKnown RBP12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 HMGB1P1B2RPK0 211 aaPredicted RBP12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 TBC1D8BQ0IIM8 1120 aa12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 DCUN1D2Q6PH85 259 aa12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 RINLQ6ZS11 566 aa12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 ELAC2Q9BQ52 826 aaKnown RBP12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 RGL1Q9NZL6 768 aa12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 CDC25CP30307 473 aa12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 KRT2P35908 639 aa12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 CEP85Q6P2H3 762 aa12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 THEMISQ8N1K5 641 aaPredicted RBP12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 PPP4R1Q8TF05 950 aa12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 ATP6V0A1Q93050 837 aa12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 CARD9Q9H257 536 aa12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 BMP15O95972 392 aa12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 SPATA21Q7Z572 469 aa12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 ZNF692Q9BU19 519 aaPredicted RBP12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 GGT7Q9UJ14 662 aa12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 IGF2BP3O00425 579 aaKnown RBP eCLIP12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 ZBTB41Q5SVQ8 909 aa12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 LIN9Q5TKA1 542 aa12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 PDLIM2Q96JY6 352 aa12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 CDK13Q14004 1512 aaKnown RBP12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 KRT3P12035 628 aa12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 GNAQP50148 359 aa12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 NEK2P51955 445 aa12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 TMED2Q15363 201 aa12.05□□□□□ -0.48
CDC42BPA-205ENST00000366769 OSBPL9Q96SU4 736 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms