RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 WNK4Q96J92 1243 aa14.06□□□□□ -0.16
CAPN9-203ENST00000366666 RPAP3Q9H6T3 665 aaPredicted RBP14.06□□□□□ -0.16
CAPN9-203ENST00000366666 BARHL2Q9NY43 387 aa14.06□□□□□ -0.16
CAPN9-203ENST00000366666 TRIM29Q14134 588 aa14.06□□□□□ -0.16
CAPN9-203ENST00000366666 CDC37Q16543 378 aaPredicted RBP14.06□□□□□ -0.16
CAPN9-203ENST00000366666 DIS3L2Q8IYB7 885 aaKnown RBP14.06□□□□□ -0.16
CAPN9-203ENST00000366666 OPTNQ96CV9 577 aa14.06□□□□□ -0.16
CAPN9-203ENST00000366666 GBA2Q9HCG7 927 aaPredicted RBP14.06□□□□□ -0.16
CAPN9-203ENST00000366666 CNPY2Q9Y2B0 182 aa14.06□□□□□ -0.16
CAPN9-203ENST00000366666 SPDYE5A6NIY4 337 aa14.05□□□□□ -0.16
CAPN9-203ENST00000366666 ZBTB5O15062 677 aa14.05□□□□□ -0.16
CAPN9-203ENST00000366666 ZSCAN23Q3MJ62 389 aa14.05□□□□□ -0.16
CAPN9-203ENST00000366666 LPAR1Q92633 364 aa14.05□□□□□ -0.16
CAPN9-203ENST00000366666 TANGO6Q9C0B7 1094 aa14.05□□□□□ -0.16
CAPN9-203ENST00000366666 TFIP11Q9UBB9 837 aaKnown RBP14.05□□□□□ -0.16
CAPN9-203ENST00000366666 SEC63Q9UGP8 760 aaKnown RBP14.05□□□□□ -0.16
CAPN9-203ENST00000366666 LOC285556D6RIA3 1793 aa14.05□□□□□ -0.16
CAPN9-203ENST00000366666 PNMA6FA0A0J9YX94 578 aa14.05□□□□□ -0.16
CAPN9-203ENST00000366666 WDR46O15213 610 aaKnown RBP14.05□□□□□ -0.16
CAPN9-203ENST00000366666 OFD1O75665 1012 aa14.05□□□□□ -0.16
CAPN9-203ENST00000366666 MSNP26038 577 aaKnown RBP14.05□□□□□ -0.16
CAPN9-203ENST00000366666 TREML2Q5T2D2 321 aa14.05□□□□□ -0.16
CAPN9-203ENST00000366666 ERO1BQ86YB8 467 aa14.05□□□□□ -0.16
CAPN9-203ENST00000366666 RASGRP4Q8TDF6 673 aa14.05□□□□□ -0.16
CAPN9-203ENST00000366666 U2AF2P26368 475 aaKnown RBP eCLIP14.04□□□□□ -0.16
CAPN9-203ENST00000366666 NAPAP54920 295 aa14.04□□□□□ -0.16
CAPN9-203ENST00000366666 NLRP5P59047 1200 aa14.04□□□□□ -0.16
CAPN9-203ENST00000366666 MKRN3Q13064 507 aaKnown RBP14.04□□□□□ -0.16
CAPN9-203ENST00000366666 RBM27Q9P2N5 1060 aaKnown RBP14.04□□□□□ -0.16
CAPN9-203ENST00000366666 USP14P54578 494 aa14.03□□□□□ -0.16
CAPN9-203ENST00000366666 PPATQ06203 517 aa14.03□□□□□ -0.16
CAPN9-203ENST00000366666 USH1GQ495M9 461 aa14.03□□□□□ -0.16
CAPN9-203ENST00000366666 CAVIN1Q6NZI2 390 aaKnown RBP14.03□□□□□ -0.16
CAPN9-203ENST00000366666 CCDC174Q6PII3 467 aa14.03□□□□□ -0.16
CAPN9-203ENST00000366666 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.03□□□□□ -0.16
CAPN9-203ENST00000366666 C12orf42Q96LP6 360 aa14.03□□□□□ -0.16
CAPN9-203ENST00000366666 C19orf81C9J6K1 198 aa14.03□□□□□ -0.16
CAPN9-203ENST00000366666 FLOT1O75955 427 aa14.03□□□□□ -0.16
CAPN9-203ENST00000366666 PDIA4P13667 645 aaKnown RBP14.03□□□□□ -0.16
CAPN9-203ENST00000366666 CEBPZQ03701 1054 aaKnown RBP14.03□□□□□ -0.16
CAPN9-203ENST00000366666 SH3D19Q5HYK7 790 aa14.03□□□□□ -0.16
CAPN9-203ENST00000366666 TNFRSF25Q93038 417 aa14.03□□□□□ -0.16
CAPN9-203ENST00000366666 PDLIM2Q96JY6 352 aa14.03□□□□□ -0.16
CAPN9-203ENST00000366666 ZSCAN16Q9H4T2 348 aaPredicted RBP14.03□□□□□ -0.16
CAPN9-203ENST00000366666 SH3GLB2Q9NR46 395 aa14.03□□□□□ -0.16
CAPN9-203ENST00000366666 FEM1BQ9UK73 627 aa14.03□□□□□ -0.16
CAPN9-203ENST00000366666 PCNTO95613 3336 aa14.02□□□□□ -0.16
CAPN9-203ENST00000366666 WNT7AO00755 349 aa14.02□□□□□ -0.16
CAPN9-203ENST00000366666 PEX10O60683 326 aa14.02□□□□□ -0.16
CAPN9-203ENST00000366666 XBP1P17861 261 aa14.02□□□□□ -0.16
CAPN9-203ENST00000366666 NCLP19338 710 aaKnown RBP14.02□□□□□ -0.16
CAPN9-203ENST00000366666 MOGSQ13724 837 aa14.02□□□□□ -0.16
CAPN9-203ENST00000366666 POTEEQ6S8J3 1075 aa14.02□□□□□ -0.16
CAPN9-203ENST00000366666 CHURC1Q8WUH1 139 aa14.02□□□□□ -0.16
CAPN9-203ENST00000366666 SLC10A4Q96EP9 437 aa14.02□□□□□ -0.16
CAPN9-203ENST00000366666 SLF1Q9BQI6 1058 aa14.02□□□□□ -0.16
CAPN9-203ENST00000366666 RANBP17Q9H2T7 1088 aaKnown RBP14.02□□□□□ -0.16
CAPN9-203ENST00000366666 ZNF536O15090 1300 aa14.02□□□□□ -0.17
CAPN9-203ENST00000366666 SMCO2A6NFE2 343 aa14.02□□□□□ -0.17
CAPN9-203ENST00000366666 M0R2N6 131 aa14.02□□□□□ -0.17
CAPN9-203ENST00000366666 FIBPO43427 364 aa14.02□□□□□ -0.17
CAPN9-203ENST00000366666 PLA2G6O60733 806 aa14.02□□□□□ -0.17
CAPN9-203ENST00000366666 KRT2P35908 639 aa14.02□□□□□ -0.17
CAPN9-203ENST00000366666 GNL2Q13823 731 aaKnown RBP14.02□□□□□ -0.17
CAPN9-203ENST00000366666 NOSTRINQ8IVI9 506 aa14.02□□□□□ -0.17
CAPN9-203ENST00000366666 C2orf69Q8N8R5 385 aa14.02□□□□□ -0.17
CAPN9-203ENST00000366666 ATG4CQ96DT6 458 aa14.02□□□□□ -0.17
CAPN9-203ENST00000366666 USP28Q96RU2 1077 aa14.02□□□□□ -0.17
CAPN9-203ENST00000366666 ZMYND12Q9H0C1 365 aa14.02□□□□□ -0.17
CAPN9-203ENST00000366666 PCDHA1Q9Y5I3 950 aa14.02□□□□□ -0.17
CAPN9-203ENST00000366666 PASKQ96RG2 1323 aa14.01□□□□□ -0.17
CAPN9-203ENST00000366666 A0A0G2JLL6 359 aaPredicted RBP14.01□□□□□ -0.17
CAPN9-203ENST00000366666 OPLAHO14841 1288 aa14.01□□□□□ -0.17
CAPN9-203ENST00000366666 TOB1P50616 345 aaPredicted RBP14.01□□□□□ -0.17
CAPN9-203ENST00000366666 PPIL2Q13356 520 aa14.01□□□□□ -0.17
CAPN9-203ENST00000366666 MYSM1Q5VVJ2 828 aa14.01□□□□□ -0.17
CAPN9-203ENST00000366666 GADL1Q6ZQY3 521 aa14.01□□□□□ -0.17
CAPN9-203ENST00000366666 PRRT2Q7Z6L0 340 aaPredicted RBP14.01□□□□□ -0.17
CAPN9-203ENST00000366666 FAM160B2Q86V87 743 aa14.01□□□□□ -0.17
CAPN9-203ENST00000366666 BLIDQ8IZY5 108 aa14.01□□□□□ -0.17
CAPN9-203ENST00000366666 PRPF38AQ8NAV1 312 aaKnown RBP14.01□□□□□ -0.17
CAPN9-203ENST00000366666 RBM46Q8TBY0 533 aaKnown RBP14.01□□□□□ -0.17
CAPN9-203ENST00000366666 AGBL1Q96MI9 1066 aa14.01□□□□□ -0.17
CAPN9-203ENST00000366666 FOXP1Q9H334 677 aaPredicted RBP14.01□□□□□ -0.17
CAPN9-203ENST00000366666 TMEM260Q9NX78 707 aa14.01□□□□□ -0.17
CAPN9-203ENST00000366666 TMOD4Q9NZQ9 345 aa14.01□□□□□ -0.17
CAPN9-203ENST00000366666 PPP1R9AQ9ULJ8 1098 aa14.01□□□□□ -0.17
CAPN9-203ENST00000366666 NOL7Q9UMY1 257 aaKnown RBP14.01□□□□□ -0.17
CAPN9-203ENST00000366666 PCDHA4Q9UN74 947 aa14.01□□□□□ -0.17
CAPN9-203ENST00000366666 KCNH4Q9UQ05 1017 aa14.01□□□□□ -0.17
CAPN9-203ENST00000366666 PRPF40AO75400 957 aaKnown RBP14□□□□□ -0.17
CAPN9-203ENST00000366666 SAFBQ15424 915 aaKnown RBP eCLIP14□□□□□ -0.17
CAPN9-203ENST00000366666 UBE2SQ16763 222 aa14□□□□□ -0.17
CAPN9-203ENST00000366666 TPRNQ4KMQ1 711 aa14□□□□□ -0.17
CAPN9-203ENST00000366666 CATSPERGQ6ZRH7 1159 aa14□□□□□ -0.17
CAPN9-203ENST00000366666 FBXO11Q86XK2 927 aa14□□□□□ -0.17
CAPN9-203ENST00000366666 RGS22Q8NE09 1264 aa14□□□□□ -0.17
CAPN9-203ENST00000366666 RBSNQ9H1K0 784 aa14□□□□□ -0.17
CAPN9-203ENST00000366666 CLIC4Q9Y696 253 aa14□□□□□ -0.17
CAPN9-203ENST00000366666 ZNF500O60304 480 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms