RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 FAM47CQ5HY64 1035 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 TMEM240Q5SV17 173 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 ANKRD45Q5TZF3 282 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 VPS53Q5VIR6 699 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 NSMFQ6X4W1 530 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 EP400NLQ6ZTU2 488 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 KIAA1211Q6ZU35 1233 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 C16orf86Q6ZW13 317 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 CHST3Q7LGC8 479 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 SPRED2Q7Z698 418 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 ERC1Q8IUD2 1116 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 FBXO16Q8IX29 292 aaPredicted RBP1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 RPAP2Q8IXW5 612 aaPredicted RBP1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 CCDC144CPQ8IYA2 1237 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 IFNL3Q8IZI9 196 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 SHCBP1Q8NEM2 672 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 REPS2Q8NFH8 660 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 PIBF1Q8WXW3 757 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 COPS5Q92905 334 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 RILPL2Q969X0 211 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 TIFAQ96CG3 184 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 KIF1BPQ96EK5 621 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 CEP95Q96GE4 821 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 C12orf42Q96LP6 360 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 CCDC17Q96LX7 622 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 TRERF1Q96PN7 1200 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 HAUS7Q99871 368 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 SLF1Q9BQI6 1058 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 ZKSCAN3Q9BRR0 538 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 ALG1Q9BT22 464 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 PBX4Q9BYU1 374 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 LRRCC1Q9C099 1032 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 FTOQ9C0B1 505 aaKnown RBP eCLIP1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 UBA5Q9GZZ9 404 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 EHD4Q9H223 541 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 CPVLQ9H3G5 476 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 MROH8Q9H579 483 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 EPHX3Q9H6B9 360 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 KANSL2Q9H9L4 492 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 GOPCQ9HD26 462 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 ZBTB40Q9NUA8 1239 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 TRMT13Q9NUP7 481 aaKnown RBP1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 CDKN2AIPQ9NXV6 580 aaPredicted RBP1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 SLC5A4Q9NY91 659 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 CXXC1Q9P0U4 656 aaPredicted RBP1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 SWAP70Q9UH65 585 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 ZNF214Q9UL59 606 aaPredicted RBP1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 MTUS1Q9ULD2 1270 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 PPP1R9AQ9ULJ8 1098 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 STX8Q9UNK0 236 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 PHF24Q9UPV7 400 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 CNPY2Q9Y2B0 182 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 YBX2Q9Y2T7 364 aaKnown RBP1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 PCDHB15Q9Y5E8 787 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 LAMA3Q16787 3333 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 TTC28Q96AY4 2481 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 GRIN2DO15399 1336 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 PDS5AQ29RF7 1337 aaKnown RBP1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 SYNGAP1Q96PV0 1343 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 SYNRGQ9UMZ2 1314 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 MYH2Q9UKX2 1941 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 MYH13Q9UKX3 1938 aa1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 RANBP2P49792 3224 aaKnown RBP1.83□□□□□ -2.12
RNU1-42P-201ENST00000364033 BDP1A6H8Y1 2624 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 SETXQ7Z333 2677 aaKnown RBP1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 PTPDC1A2A3K4 754 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 FAM86C2PA6NEL3 165 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 EPOPA6NHQ4 379 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 TSPY2A6NKD2 308 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 TRIM6-TRIM34B2RNG4 842 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 ARVCFO00192 962 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 TNFRSF10AO00220 468 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 KIAA0355O15063 1070 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 WDR46O15213 610 aaKnown RBP1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 CTAGE5O15320 804 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 TLR3O15455 904 aaKnown RBP1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 GPAA1O43292 621 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 B4GALT4O60513 344 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 MSCO60682 206 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 KDM4AO75164 1064 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 ADAMTS4O75173 837 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 DUSP11O75319 330 aaKnown RBP1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 HMMRO75330 724 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 IGHA2P01877 340 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 TSPY3P0CV98 308 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 TSPY8P0CW00 308 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 BMP3P12645 472 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 AKR1A1P14550 325 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 PTMSP20962 102 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 SLC1A4P43007 532 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 CDK7P50613 346 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 KCNQ1P51787 676 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 SMAD3P84022 425 aaKnown RBP1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 ZNF200P98182 395 aaPredicted RBP1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 PPARAQ07869 468 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 TTLL4Q14679 1199 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 UBE3CQ15386 1083 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 LY6KQ17RY6 165 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 CCDC96Q2M329 555 aa1.82□□□□□ -2.12
RNU1-42P-201ENST00000364033 TCTN1Q2MV58 587 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms