RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 FAM83BQ5T0W9 1011 aa24.01■■□□□ 1.43
MAP1LC3A-201ENST00000360668 CCDC84Q86UT8 332 aaPredicted RBP24.01■■□□□ 1.43
MAP1LC3A-201ENST00000360668 COA7Q96BR5 231 aa24.01■■□□□ 1.43
MAP1LC3A-201ENST00000360668 PCDHB6Q9Y5E3 794 aa24.01■■□□□ 1.43
MAP1LC3A-201ENST00000360668 CCDC194A0A1B0GVG4 234 aa24■■□□□ 1.43
MAP1LC3A-201ENST00000360668 IQCA1LA6NCM1 817 aa24■■□□□ 1.43
MAP1LC3A-201ENST00000360668 LIG1P18858 919 aa24■■□□□ 1.43
MAP1LC3A-201ENST00000360668 MRE11P49959 708 aa24■■□□□ 1.43
MAP1LC3A-201ENST00000360668 NOM1Q5C9Z4 860 aaKnown RBP24■■□□□ 1.43
MAP1LC3A-201ENST00000360668 NOL9Q5SY16 702 aaKnown RBP24■■□□□ 1.43
MAP1LC3A-201ENST00000360668 CHURC1Q8WUH1 139 aa24■■□□□ 1.43
MAP1LC3A-201ENST00000360668 LPAR1Q92633 364 aa24■■□□□ 1.43
MAP1LC3A-201ENST00000360668 WDR18Q9BV38 432 aa24■■□□□ 1.43
MAP1LC3A-201ENST00000360668 PICK1Q9NRD5 415 aa24■■□□□ 1.43
MAP1LC3A-201ENST00000360668 ADCY7P51828 1080 aa23.99■■□□□ 1.43
MAP1LC3A-201ENST00000360668 KRT25Q7Z3Z0 450 aa23.99■■□□□ 1.43
MAP1LC3A-201ENST00000360668 FAM160B2Q86V87 743 aa23.99■■□□□ 1.43
MAP1LC3A-201ENST00000360668 CCAR1Q8IX12 1150 aaKnown RBP23.99■■□□□ 1.43
MAP1LC3A-201ENST00000360668 AS3MTQ9HBK9 375 aa23.99■■□□□ 1.43
MAP1LC3A-201ENST00000360668 PRR12Q9ULL5 1215 aa23.99■■□□□ 1.43
MAP1LC3A-201ENST00000360668 CEP350Q5VT06 3117 aa23.99■■□□□ 1.43
MAP1LC3A-201ENST00000360668 LETM1O95202 739 aaPredicted RBP23.99■■□□□ 1.43
MAP1LC3A-201ENST00000360668 HSPA6P17066 643 aa23.99■■□□□ 1.43
MAP1LC3A-201ENST00000360668 FSTL1Q12841 308 aa23.99■■□□□ 1.43
MAP1LC3A-201ENST00000360668 ZYXQ15942 572 aaKnown RBP23.99■■□□□ 1.43
MAP1LC3A-201ENST00000360668 TTC38Q5R3I4 469 aa23.99■■□□□ 1.43
MAP1LC3A-201ENST00000360668 AXDND1Q5T1B0 1012 aaPredicted RBP23.99■■□□□ 1.43
MAP1LC3A-201ENST00000360668 RASGRP4Q8TDF6 673 aa23.99■■□□□ 1.43
MAP1LC3A-201ENST00000360668 GLT8D2Q9H1C3 349 aa23.99■■□□□ 1.43
MAP1LC3A-201ENST00000360668 RIC8AQ9NPQ8 531 aa23.99■■□□□ 1.43
MAP1LC3A-201ENST00000360668 DDX19AQ9NUU7 478 aaKnown RBP23.99■■□□□ 1.43
MAP1LC3A-201ENST00000360668 FEM1BQ9UK73 627 aa23.99■■□□□ 1.43
MAP1LC3A-201ENST00000360668 ADM5C9JUS6 153 aa23.98■■□□□ 1.43
MAP1LC3A-201ENST00000360668 PTPRAP18433 802 aa23.98■■□□□ 1.43
MAP1LC3A-201ENST00000360668 ATP2B1P20020 1258 aa23.98■■□□□ 1.43
MAP1LC3A-201ENST00000360668 MARCKSP29966 332 aaPredicted RBP23.98■■□□□ 1.43
MAP1LC3A-201ENST00000360668 USP14P54578 494 aa23.98■■□□□ 1.43
MAP1LC3A-201ENST00000360668 KRT26Q7Z3Y9 468 aa23.98■■□□□ 1.43
MAP1LC3A-201ENST00000360668 MRPS27Q92552 414 aaKnown RBP23.98■■□□□ 1.43
MAP1LC3A-201ENST00000360668 ZKSCAN4Q969J2 545 aaPredicted RBP23.98■■□□□ 1.43
MAP1LC3A-201ENST00000360668 AMNQ9BXJ7 453 aa23.98■■□□□ 1.43
MAP1LC3A-201ENST00000360668 TAF1DQ9H5J8 278 aaPredicted RBP23.98■■□□□ 1.43
MAP1LC3A-201ENST00000360668 WDR46O15213 610 aaKnown RBP23.97■■□□□ 1.43
MAP1LC3A-201ENST00000360668 CUTAO60888 179 aa23.97■■□□□ 1.43
MAP1LC3A-201ENST00000360668 CCDC73Q6ZRK6 1079 aa23.97■■□□□ 1.43
MAP1LC3A-201ENST00000360668 REXO1Q8N1G1 1221 aaKnown RBP23.97■■□□□ 1.43
MAP1LC3A-201ENST00000360668 KRI1Q8N9T8 703 aaKnown RBP23.97■■□□□ 1.43
MAP1LC3A-201ENST00000360668 SMC1BQ8NDV3 1235 aa23.97■■□□□ 1.43
MAP1LC3A-201ENST00000360668 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.97■■□□□ 1.43
MAP1LC3A-201ENST00000360668 USP2O75604 605 aaPredicted RBP23.96■■□□□ 1.43
MAP1LC3A-201ENST00000360668 CMA1P23946 247 aa23.96■■□□□ 1.43
MAP1LC3A-201ENST00000360668 TRAF1Q13077 416 aa23.96■■□□□ 1.43
MAP1LC3A-201ENST00000360668 FBXO11Q86XK2 927 aa23.96■■□□□ 1.43
MAP1LC3A-201ENST00000360668 FSIP1Q8NA03 581 aa23.96■■□□□ 1.43
MAP1LC3A-201ENST00000360668 CUL5Q93034 780 aa23.96■■□□□ 1.43
MAP1LC3A-201ENST00000360668 DACT1Q9NYF0 836 aa23.96■■□□□ 1.43
MAP1LC3A-201ENST00000360668 PCDHA1Q9Y5I3 950 aa23.96■■□□□ 1.43
MAP1LC3A-201ENST00000360668 MRPL12P52815 198 aaKnown RBP23.95■■□□□ 1.43
MAP1LC3A-201ENST00000360668 NONOQ15233 471 aaKnown RBP eCLIP23.95■■□□□ 1.43
MAP1LC3A-201ENST00000360668 ZNF280CQ8ND82 737 aa23.95■■□□□ 1.43
MAP1LC3A-201ENST00000360668 GOLPH3LQ9H4A5 285 aa23.95■■□□□ 1.43
MAP1LC3A-201ENST00000360668 PPP1R12BO60237 982 aaPredicted RBP23.95■■□□□ 1.42
MAP1LC3A-201ENST00000360668 NR1I2O75469 434 aa23.95■■□□□ 1.42
MAP1LC3A-201ENST00000360668 PTPREP23469 700 aa23.95■■□□□ 1.42
MAP1LC3A-201ENST00000360668 FAM160A1Q05DH4 1040 aa23.95■■□□□ 1.42
MAP1LC3A-201ENST00000360668 PNMA8AQ86V59 439 aaPredicted RBP23.95■■□□□ 1.42
MAP1LC3A-201ENST00000360668 PHIPQ8WWQ0 1821 aa23.95■■□□□ 1.42
MAP1LC3A-201ENST00000360668 RANBP17Q9H2T7 1088 aaKnown RBP23.95■■□□□ 1.42
MAP1LC3A-201ENST00000360668 FBXO2Q9UK22 296 aaPredicted RBP23.95■■□□□ 1.42
MAP1LC3A-201ENST00000360668 FZD1Q9UP38 647 aa23.95■■□□□ 1.42
MAP1LC3A-201ENST00000360668 SRPRBQ9Y5M8 271 aaKnown RBP23.95■■□□□ 1.42
MAP1LC3A-201ENST00000360668 WNT7AO00755 349 aa23.94■■□□□ 1.42
MAP1LC3A-201ENST00000360668 BACE1P56817 501 aa23.94■■□□□ 1.42
MAP1LC3A-201ENST00000360668 MTMR2Q13614 643 aa23.94■■□□□ 1.42
MAP1LC3A-201ENST00000360668 ZNF174Q15697 407 aa23.94■■□□□ 1.42
MAP1LC3A-201ENST00000360668 ENGASEQ8NFI3 743 aa23.94■■□□□ 1.42
MAP1LC3A-201ENST00000360668 PSTPIP2Q9H939 334 aa23.94■■□□□ 1.42
MAP1LC3A-201ENST00000360668 PAPPA2Q9BXP8 1791 aa23.93■■□□□ 1.42
MAP1LC3A-201ENST00000360668 SYCE3A1L190 88 aa23.93■■□□□ 1.42
MAP1LC3A-201ENST00000360668 CLK2P49760 499 aaKnown RBP23.93■■□□□ 1.42
MAP1LC3A-201ENST00000360668 MAP3K9P80192 1104 aa23.93■■□□□ 1.42
MAP1LC3A-201ENST00000360668 SPP2Q13103 211 aa23.93■■□□□ 1.42
MAP1LC3A-201ENST00000360668 SNW1Q13573 536 aaKnown RBP23.93■■□□□ 1.42
MAP1LC3A-201ENST00000360668 ZNF579Q8NAF0 562 aaKnown RBP23.93■■□□□ 1.42
MAP1LC3A-201ENST00000360668 NUP62CLQ9H1M0 184 aa23.93■■□□□ 1.42
MAP1LC3A-201ENST00000360668 CLSTN2Q9H4D0 955 aa23.93■■□□□ 1.42
MAP1LC3A-201ENST00000360668 BIN2Q9UBW5 565 aaPredicted RBP23.93■■□□□ 1.42
MAP1LC3A-201ENST00000360668 FAM237AA0A1B0GTK4 181 aa23.92■■□□□ 1.42
MAP1LC3A-201ENST00000360668 POTEIP0CG38 1075 aa23.92■■□□□ 1.42
MAP1LC3A-201ENST00000360668 POTEJP0CG39 1038 aa23.92■■□□□ 1.42
MAP1LC3A-201ENST00000360668 NF2P35240 595 aa23.92■■□□□ 1.42
MAP1LC3A-201ENST00000360668 SNAP25P60880 206 aa23.92■■□□□ 1.42
MAP1LC3A-201ENST00000360668 ATP2C1P98194 919 aaPredicted RBP23.92■■□□□ 1.42
MAP1LC3A-201ENST00000360668 INF2Q27J81 1249 aa23.92■■□□□ 1.42
MAP1LC3A-201ENST00000360668 JAKMIP3Q5VZ66 844 aa23.92■■□□□ 1.42
MAP1LC3A-201ENST00000360668 LRSAM1Q6UWE0 723 aa23.92■■□□□ 1.42
MAP1LC3A-201ENST00000360668 GAS2L3Q86XJ1 694 aa23.92■■□□□ 1.42
MAP1LC3A-201ENST00000360668 TEX2Q8IWB9 1127 aa23.92■■□□□ 1.42
MAP1LC3A-201ENST00000360668 FERMT2Q96AC1 680 aa23.92■■□□□ 1.42
MAP1LC3A-201ENST00000360668 KIFC2Q96AC6 838 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms