RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 L1RE1Q9UN81 338 aa13.32□□□□□ -0.28
EPHB4-202ENST00000360620 DIP2AQ14689 1571 aa13.32□□□□□ -0.28
EPHB4-202ENST00000360620 TLDC2A0PJX2 215 aa13.31□□□□□ -0.28
EPHB4-202ENST00000360620 PPP1R12BO60237 982 aaPredicted RBP13.31□□□□□ -0.28
EPHB4-202ENST00000360620 ATP1A1P05023 1023 aaKnown RBP13.31□□□□□ -0.28
EPHB4-202ENST00000360620 EZRP15311 586 aaKnown RBP13.31□□□□□ -0.28
EPHB4-202ENST00000360620 COG1Q8WTW3 980 aa13.31□□□□□ -0.28
EPHB4-202ENST00000360620 CCDC43Q96MW1 224 aaKnown RBP13.31□□□□□ -0.28
EPHB4-202ENST00000360620 ANKIB1Q9P2G1 1089 aa13.31□□□□□ -0.28
EPHB4-202ENST00000360620 BAG3O95817 575 aa13.31□□□□□ -0.28
EPHB4-202ENST00000360620 GBP2P32456 591 aaPredicted RBP13.31□□□□□ -0.28
EPHB4-202ENST00000360620 CEP85LQ5SZL2 805 aa13.31□□□□□ -0.28
EPHB4-202ENST00000360620 FNBP4Q8N3X1 1017 aaPredicted RBP13.31□□□□□ -0.28
EPHB4-202ENST00000360620 CABS1Q96KC9 395 aa13.31□□□□□ -0.28
EPHB4-202ENST00000360620 MYCBPQ99417 103 aaPredicted RBP13.31□□□□□ -0.28
EPHB4-202ENST00000360620 TMX4Q9H1E5 349 aaPredicted RBP13.31□□□□□ -0.28
EPHB4-202ENST00000360620 MAP3K15Q6ZN16 1313 aa13.31□□□□□ -0.28
EPHB4-202ENST00000360620 TRAPPC10P48553 1259 aa13.31□□□□□ -0.28
EPHB4-202ENST00000360620 EPHB4P54760 987 aa13.31□□□□□ -0.28
EPHB4-202ENST00000360620 ZBED6P86452 979 aa13.31□□□□□ -0.28
EPHB4-202ENST00000360620 GUCY2DQ02846 1103 aa13.31□□□□□ -0.28
EPHB4-202ENST00000360620 BRINP3Q76B58 766 aa13.31□□□□□ -0.28
EPHB4-202ENST00000360620 MAP3K14Q99558 947 aa13.31□□□□□ -0.28
EPHB4-202ENST00000360620 CYP2D7A0A087X1C5 515 aa13.3□□□□□ -0.28
EPHB4-202ENST00000360620 SMIM23A6NLE4 172 aa13.3□□□□□ -0.28
EPHB4-202ENST00000360620 ACTN4O43707 911 aaKnown RBP13.3□□□□□ -0.28
EPHB4-202ENST00000360620 PRCPP42785 496 aa13.3□□□□□ -0.28
EPHB4-202ENST00000360620 TNNI2P48788 182 aa13.3□□□□□ -0.28
EPHB4-202ENST00000360620 SMIM5Q71RC9 77 aa13.3□□□□□ -0.28
EPHB4-202ENST00000360620 ASAP1Q9ULH1 1129 aa13.3□□□□□ -0.28
EPHB4-202ENST00000360620 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.3□□□□□ -0.28
EPHB4-202ENST00000360620 LGALS16A8MUM7 142 aa13.3□□□□□ -0.28
EPHB4-202ENST00000360620 TFRCP02786 760 aaKnown RBP13.3□□□□□ -0.28
EPHB4-202ENST00000360620 GYG1P46976 350 aa13.3□□□□□ -0.28
EPHB4-202ENST00000360620 NLRP10Q86W26 655 aa13.3□□□□□ -0.28
EPHB4-202ENST00000360620 MMS19Q96T76 1030 aa13.3□□□□□ -0.28
EPHB4-202ENST00000360620 SLC39A2Q9NP94 309 aa13.3□□□□□ -0.28
EPHB4-202ENST00000360620 FAM169AQ9Y6X4 670 aa13.3□□□□□ -0.28
EPHB4-202ENST00000360620 GCOM1H8Y6P7 765 aaPredicted RBP13.3□□□□□ -0.28
EPHB4-202ENST00000360620 PRPF3O43395 683 aaKnown RBP13.3□□□□□ -0.28
EPHB4-202ENST00000360620 CEP104O60308 925 aa13.3□□□□□ -0.28
EPHB4-202ENST00000360620 MYZAPP0CAP1 466 aa13.3□□□□□ -0.28
EPHB4-202ENST00000360620 MSL1Q68DK7 614 aa13.3□□□□□ -0.28
EPHB4-202ENST00000360620 CCDC170Q8IYT3 715 aa13.3□□□□□ -0.28
EPHB4-202ENST00000360620 RETREG2Q8NC44 543 aa13.3□□□□□ -0.28
EPHB4-202ENST00000360620 TSKSQ9UJT2 592 aa13.3□□□□□ -0.28
EPHB4-202ENST00000360620 RIMS1Q86UR5 1692 aaKnown RBP13.29□□□□□ -0.28
EPHB4-202ENST00000360620 MOCS3O95396 460 aa13.29□□□□□ -0.28
EPHB4-202ENST00000360620 TFAP4Q01664 338 aa13.29□□□□□ -0.28
EPHB4-202ENST00000360620 STAG1Q8WVM7 1258 aa13.29□□□□□ -0.28
EPHB4-202ENST00000360620 SELENOSQ9BQE4 189 aa13.29□□□□□ -0.28
EPHB4-202ENST00000360620 ZNF18P17022 549 aa13.29□□□□□ -0.28
EPHB4-202ENST00000360620 CALRP27797 417 aaKnown RBP13.29□□□□□ -0.28
EPHB4-202ENST00000360620 RASSF7Q02833 373 aa13.29□□□□□ -0.28
EPHB4-202ENST00000360620 PDCLQ13371 301 aa13.29□□□□□ -0.28
EPHB4-202ENST00000360620 NONOQ15233 471 aaKnown RBP eCLIP13.29□□□□□ -0.28
EPHB4-202ENST00000360620 KIAA0753Q2KHM9 967 aa13.29□□□□□ -0.28
EPHB4-202ENST00000360620 MMS22LQ6ZRQ5 1243 aa13.29□□□□□ -0.28
EPHB4-202ENST00000360620 LRRC45Q96CN5 670 aa13.29□□□□□ -0.28
EPHB4-202ENST00000360620 RRP36Q96EU6 259 aaKnown RBP13.29□□□□□ -0.28
EPHB4-202ENST00000360620 ANKZF1Q9H8Y5 726 aa13.29□□□□□ -0.28
EPHB4-202ENST00000360620 DDAH1O94760 285 aa13.29□□□□□ -0.28
EPHB4-202ENST00000360620 SF3A3Q12874 501 aaKnown RBP eCLIP13.29□□□□□ -0.286e-7■■■■■ 27.5
EPHB4-202ENST00000360620 P2RX5Q93086 422 aa13.29□□□□□ -0.28
EPHB4-202ENST00000360620 KIFC2Q96AC6 838 aa13.29□□□□□ -0.28
EPHB4-202ENST00000360620 KLHL30Q0D2K2 578 aa13.28□□□□□ -0.28
EPHB4-202ENST00000360620 PTPROQ16827 1216 aa13.28□□□□□ -0.28
EPHB4-202ENST00000360620 MSANTD4Q8NCY6 345 aa13.28□□□□□ -0.28
EPHB4-202ENST00000360620 PLCD4Q9BRC7 762 aa13.28□□□□□ -0.28
EPHB4-202ENST00000360620 TRIM31Q9BZY9 425 aa13.28□□□□□ -0.28
EPHB4-202ENST00000360620 EPB41L5Q9HCM4 733 aa13.28□□□□□ -0.28
EPHB4-202ENST00000360620 INTS13Q9NVM9 706 aa13.28□□□□□ -0.28
EPHB4-202ENST00000360620 GOLGA6L10A0A0M3HER8 536 aa13.28□□□□□ -0.28
EPHB4-202ENST00000360620 GSG1L2A8MUP6 293 aa13.28□□□□□ -0.28
EPHB4-202ENST00000360620 HEXIM1O94992 359 aaKnown RBP13.28□□□□□ -0.28
EPHB4-202ENST00000360620 ALX1Q15699 326 aa13.28□□□□□ -0.28
EPHB4-202ENST00000360620 RUFY4Q6ZNE9 571 aa13.28□□□□□ -0.28
EPHB4-202ENST00000360620 IQCDQ96DY2 449 aa13.28□□□□□ -0.28
EPHB4-202ENST00000360620 DHTKD1Q96HY7 919 aaPredicted RBP13.28□□□□□ -0.28
EPHB4-202ENST00000360620 LDHCP07864 332 aa13.28□□□□□ -0.28
EPHB4-202ENST00000360620 ATP6V1AP38606 617 aa13.28□□□□□ -0.28
EPHB4-202ENST00000360620 TECP42680 631 aa13.28□□□□□ -0.28
EPHB4-202ENST00000360620 TBX2Q13207 712 aaPredicted RBP13.28□□□□□ -0.28
EPHB4-202ENST00000360620 RPS6KA1Q15418 735 aa13.28□□□□□ -0.28
EPHB4-202ENST00000360620 SFMBT2Q5VUG0 894 aa13.28□□□□□ -0.28
EPHB4-202ENST00000360620 ANKS4BQ8N8V4 417 aa13.28□□□□□ -0.28
EPHB4-202ENST00000360620 PNMA1Q8ND90 353 aa13.28□□□□□ -0.28
EPHB4-202ENST00000360620 SEC31BQ9NQW1 1179 aa13.28□□□□□ -0.28
EPHB4-202ENST00000360620 LCMT1Q9UIC8 334 aa13.28□□□□□ -0.28
EPHB4-202ENST00000360620 UBR1Q8IWV7 1749 aa13.28□□□□□ -0.28
EPHB4-202ENST00000360620 SLIT1O75093 1534 aa13.27□□□□□ -0.28
EPHB4-202ENST00000360620 MPHOSPH10O00566 681 aaKnown RBP13.27□□□□□ -0.28
EPHB4-202ENST00000360620 EIF4A3P38919 411 aaKnown RBP13.27□□□□□ -0.28
EPHB4-202ENST00000360620 NNTQ13423 1086 aa13.27□□□□□ -0.28
EPHB4-202ENST00000360620 SNX29Q8TEQ0 813 aa13.27□□□□□ -0.28
EPHB4-202ENST00000360620 ISCA1Q9BUE6 129 aa13.27□□□□□ -0.28
EPHB4-202ENST00000360620 THAP9Q9H5L6 903 aa13.27□□□□□ -0.28
EPHB4-202ENST00000360620 MON2Q7Z3U7 1717 aa13.27□□□□□ -0.28
EPHB4-202ENST00000360620 ANO9A1A5B4 782 aa13.27□□□□□ -0.29
EPHB4-202ENST00000360620 CD44P16070 742 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms