RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 CHMP4BP1P59074 171 aa12.52□□□□□ -0.41
SSU72-202ENST00000359060 KMT5BQ4FZB7 885 aa12.52□□□□□ -0.41
SSU72-202ENST00000359060 OR8K1Q8NGG5 319 aa12.52□□□□□ -0.41
SSU72-202ENST00000359060 FAM207AQ9NSI2 230 aaPredicted RBP12.52□□□□□ -0.41
SSU72-202ENST00000359060 SERPINB13Q9UIV8 391 aa12.52□□□□□ -0.41
SSU72-202ENST00000359060 KRT86O43790 486 aa12.51□□□□□ -0.41
SSU72-202ENST00000359060 TRIM14Q14142 442 aa12.51□□□□□ -0.41
SSU72-202ENST00000359060 FCHSD1Q86WN1 690 aa12.51□□□□□ -0.41
SSU72-202ENST00000359060 CEP112Q8N8E3 955 aa12.51□□□□□ -0.41
SSU72-202ENST00000359060 NAA15Q9BXJ9 866 aaKnown RBP12.51□□□□□ -0.41
SSU72-202ENST00000359060 IRX2Q9BZI1 471 aaPredicted RBP12.51□□□□□ -0.41
SSU72-202ENST00000359060 LUC7LQ9NQ29 371 aaKnown RBP12.51□□□□□ -0.41
SSU72-202ENST00000359060 ATRNO75882 1429 aa12.51□□□□□ -0.41
SSU72-202ENST00000359060 B4DLN1 442 aa12.51□□□□□ -0.41
SSU72-202ENST00000359060 KIF5AQ12840 1032 aa12.51□□□□□ -0.41
SSU72-202ENST00000359060 NYAP1Q6ZVC0 841 aa12.51□□□□□ -0.41
SSU72-202ENST00000359060 NELFCDQ8IXH7 590 aa12.51□□□□□ -0.41
SSU72-202ENST00000359060 NAPGQ99747 312 aaPredicted RBP12.51□□□□□ -0.41
SSU72-202ENST00000359060 LRRC27Q9C0I9 530 aa12.51□□□□□ -0.41
SSU72-202ENST00000359060 ABCC6O95255 1503 aa12.51□□□□□ -0.41
SSU72-202ENST00000359060 SPDYE3A6NKU9 549 aa12.51□□□□□ -0.41
SSU72-202ENST00000359060 FAM196BA6NMK8 535 aa12.51□□□□□ -0.41
SSU72-202ENST00000359060 EIF3JO75822 258 aaKnown RBP12.51□□□□□ -0.41
SSU72-202ENST00000359060 BMP6P22004 513 aa12.51□□□□□ -0.41
SSU72-202ENST00000359060 KRT83P78385 493 aa12.51□□□□□ -0.41
SSU72-202ENST00000359060 UBE2SQ16763 222 aa12.51□□□□□ -0.41
SSU72-202ENST00000359060 TMEM60Q9H2L4 133 aa12.51□□□□□ -0.41
SSU72-202ENST00000359060 TMEM260Q9NX78 707 aa12.51□□□□□ -0.41
SSU72-202ENST00000359060 RWDD2AQ9UIY3 292 aa12.51□□□□□ -0.41
SSU72-202ENST00000359060 BARHL2Q9NY43 387 aa12.51□□□□□ -0.41
SSU72-202ENST00000359060 A0A087X0B3 334 aa12.5□□□□□ -0.41
SSU72-202ENST00000359060 CD44P16070 742 aaKnown RBP12.5□□□□□ -0.41
SSU72-202ENST00000359060 DPYDQ12882 1025 aa12.5□□□□□ -0.41
SSU72-202ENST00000359060 TXNRD1Q16881 649 aa12.5□□□□□ -0.41
SSU72-202ENST00000359060 RASGRP2Q7LDG7 609 aa12.5□□□□□ -0.41
SSU72-202ENST00000359060 SMAP1Q8IYB5 467 aaPredicted RBP12.5□□□□□ -0.41
SSU72-202ENST00000359060 RUFY1Q96T51 708 aa12.5□□□□□ -0.41
SSU72-202ENST00000359060 TUBGCP2Q9BSJ2 902 aa12.5□□□□□ -0.41
SSU72-202ENST00000359060 PSTPIP2Q9H939 334 aa12.5□□□□□ -0.41
SSU72-202ENST00000359060 TRPC5Q9UL62 973 aaPredicted RBP12.5□□□□□ -0.41
SSU72-202ENST00000359060 RASA1P20936 1047 aa12.5□□□□□ -0.41
SSU72-202ENST00000359060 SYCP1Q15431 976 aa12.5□□□□□ -0.41
SSU72-202ENST00000359060 GJD4Q96KN9 370 aaPredicted RBP12.5□□□□□ -0.41
SSU72-202ENST00000359060 EPC1Q9H2F5 836 aa12.5□□□□□ -0.41
SSU72-202ENST00000359060 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.5□□□□□ -0.41
SSU72-202ENST00000359060 GRIK5Q16478 980 aa12.5□□□□□ -0.41
SSU72-202ENST00000359060 HERC4Q5GLZ8 1057 aaPredicted RBP12.5□□□□□ -0.41
SSU72-202ENST00000359060 TCP11X2Q5H9J9 407 aa12.5□□□□□ -0.41
SSU72-202ENST00000359060 SLC35F6Q8N357 371 aa12.5□□□□□ -0.41
SSU72-202ENST00000359060 AFF2P51816 1311 aa12.5□□□□□ -0.41
SSU72-202ENST00000359060 PHLPP2Q6ZVD8 1323 aa12.5□□□□□ -0.41
SSU72-202ENST00000359060 MFAP3LO75121 409 aa12.49□□□□□ -0.41
SSU72-202ENST00000359060 LRRC41Q15345 812 aa12.49□□□□□ -0.41
SSU72-202ENST00000359060 ZYXQ15942 572 aaKnown RBP12.49□□□□□ -0.41
SSU72-202ENST00000359060 TC2NQ8N9U0 490 aa12.49□□□□□ -0.41
SSU72-202ENST00000359060 CCDC51Q96ER9 411 aa12.49□□□□□ -0.41
SSU72-202ENST00000359060 WDR24Q96S15 920 aa12.49□□□□□ -0.41
SSU72-202ENST00000359060 GBP3Q9H0R5 595 aa12.49□□□□□ -0.41
SSU72-202ENST00000359060 VEZTQ9HBM0 779 aa12.49□□□□□ -0.41
SSU72-202ENST00000359060 SH3GLB2Q9NR46 395 aa12.49□□□□□ -0.41
SSU72-202ENST00000359060 PCDHA6Q9UN73 950 aa12.49□□□□□ -0.41
SSU72-202ENST00000359060 PCDHA12Q9UN75 941 aa12.49□□□□□ -0.41
SSU72-202ENST00000359060 PCDHA8Q9Y5H6 950 aa12.49□□□□□ -0.41
SSU72-202ENST00000359060 EPN1Q9Y6I3 576 aaPredicted RBP12.49□□□□□ -0.41
SSU72-202ENST00000359060 WNT7AO00755 349 aa12.49□□□□□ -0.41
SSU72-202ENST00000359060 KIF20AO95235 890 aa12.49□□□□□ -0.41
SSU72-202ENST00000359060 APBA3O96018 575 aa12.49□□□□□ -0.41
SSU72-202ENST00000359060 NEK11Q8NG66 645 aa12.49□□□□□ -0.41
SSU72-202ENST00000359060 SEPT11Q9NVA2 429 aaKnown RBP12.49□□□□□ -0.41
SSU72-202ENST00000359060 CTIFO43310 598 aaKnown RBP12.49□□□□□ -0.41
SSU72-202ENST00000359060 DNM2P50570 870 aa12.49□□□□□ -0.41
SSU72-202ENST00000359060 NEDD1Q8NHV4 660 aa12.49□□□□□ -0.41
SSU72-202ENST00000359060 CNOT6LQ96LI5 555 aaKnown RBP12.49□□□□□ -0.41
SSU72-202ENST00000359060 MXD3Q9BW11 206 aa12.49□□□□□ -0.41
SSU72-202ENST00000359060 FAM205AQ6ZU69 1335 aa12.49□□□□□ -0.41
SSU72-202ENST00000359060 SEC31AO94979 1220 aaKnown RBP12.48□□□□□ -0.41
SSU72-202ENST00000359060 TTLL1O95922 423 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 RGS22Q8NE09 1264 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 ERMNQ8TAM6 284 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 PSMB7Q99436 277 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 N4BP2Q86UW6 1770 aaPredicted RBP12.48□□□□□ -0.41
SSU72-202ENST00000359060 EFCAB8A8MWE9 144 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 EHBP1Q8NDI1 1231 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 TBC1D16Q8TBP0 767 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 JAKMIP2Q96AA8 810 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 PANX2Q96RD6 677 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 NLRC4Q9NPP4 1024 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 PCDHA1Q9Y5I3 950 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 COL18A1P39060 1754 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 POTEMA6NI47 508 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 LAD1O00515 517 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 PHACTR2O75167 634 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 AKR1B1P15121 316 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 ALDH1B1P30837 517 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 NCAPH2Q6IBW4 605 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 TYW1BQ6NUM6 668 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 P2RX5Q93086 422 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 HPS3Q969F9 1004 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 SPAG5Q96R06 1193 aa12.48□□□□□ -0.41
SSU72-202ENST00000359060 IL17RBQ9NRM6 502 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms