RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 NT5C2P49902 561 aa9.66□□□□□ -0.86
RFX3-202ENST00000358730 CCDC178Q5BJE1 867 aa9.66□□□□□ -0.86
RFX3-202ENST00000358730 JAKMIP3Q5VZ66 844 aa9.66□□□□□ -0.86
RFX3-202ENST00000358730 GALNT17Q6IS24 598 aa9.66□□□□□ -0.86
RFX3-202ENST00000358730 NAPGQ99747 312 aaPredicted RBP9.66□□□□□ -0.86
RFX3-202ENST00000358730 CCDC151A5D8V7 595 aa9.66□□□□□ -0.86
RFX3-202ENST00000358730 LGALS16A8MUM7 142 aa9.66□□□□□ -0.86
RFX3-202ENST00000358730 TM4SF1P30408 202 aa9.66□□□□□ -0.86
RFX3-202ENST00000358730 GSTO1P78417 241 aa9.66□□□□□ -0.86
RFX3-202ENST00000358730 KCNB1Q14721 858 aa9.66□□□□□ -0.86
RFX3-202ENST00000358730 GRIK5Q16478 980 aa9.66□□□□□ -0.86
RFX3-202ENST00000358730 IRF2BP1Q8IU81 584 aa9.66□□□□□ -0.86
RFX3-202ENST00000358730 MAPKAPK5Q8IW41 473 aa9.66□□□□□ -0.86
RFX3-202ENST00000358730 TMEM47Q9BQJ4 181 aa9.66□□□□□ -0.86
RFX3-202ENST00000358730 MAGEC2Q9UBF1 373 aaPredicted RBP9.66□□□□□ -0.86
RFX3-202ENST00000358730 BTAF1O14981 1849 aa9.65□□□□□ -0.86
RFX3-202ENST00000358730 TFRCP02786 760 aaKnown RBP9.65□□□□□ -0.86
RFX3-202ENST00000358730 EEF1GP26641 437 aaKnown RBP9.65□□□□□ -0.86
RFX3-202ENST00000358730 OAS2P29728 719 aaKnown RBP9.65□□□□□ -0.86
RFX3-202ENST00000358730 ARHGAP25P42331 645 aa9.65□□□□□ -0.86
RFX3-202ENST00000358730 NAPAP54920 295 aa9.65□□□□□ -0.86
RFX3-202ENST00000358730 FAM193AP78312 1265 aa9.65□□□□□ -0.86
RFX3-202ENST00000358730 TUBB2AQ13885 445 aa9.65□□□□□ -0.86
RFX3-202ENST00000358730 GPR101Q96P66 508 aaPredicted RBP9.65□□□□□ -0.86
RFX3-202ENST00000358730 CHP1Q99653 195 aa9.65□□□□□ -0.86
RFX3-202ENST00000358730 TUBB2BQ9BVA1 445 aa9.65□□□□□ -0.86
RFX3-202ENST00000358730 CCSER1Q9C0I3 900 aa9.65□□□□□ -0.86
RFX3-202ENST00000358730 CPVLQ9H3G5 476 aa9.65□□□□□ -0.86
RFX3-202ENST00000358730 RTCBQ9Y3I0 505 aaKnown RBP9.65□□□□□ -0.86
RFX3-202ENST00000358730 CDK5RAP2Q96SN8 1893 aa9.65□□□□□ -0.86
RFX3-202ENST00000358730 TTC26A0AVF1 554 aa9.65□□□□□ -0.87
RFX3-202ENST00000358730 LAD1O00515 517 aa9.65□□□□□ -0.87
RFX3-202ENST00000358730 KLRC4O43908 158 aa9.65□□□□□ -0.87
RFX3-202ENST00000358730 RHOBTB3O94955 611 aa9.65□□□□□ -0.87
RFX3-202ENST00000358730 MYL1P05976 194 aa9.65□□□□□ -0.87
RFX3-202ENST00000358730 RASA1P20936 1047 aa9.65□□□□□ -0.87
RFX3-202ENST00000358730 SMC1AQ14683 1233 aaKnown RBP9.65□□□□□ -0.87
RFX3-202ENST00000358730 NFIXQ14938 502 aa9.65□□□□□ -0.87
RFX3-202ENST00000358730 LONRF2Q1L5Z9 754 aa9.65□□□□□ -0.87
RFX3-202ENST00000358730 MB21D1Q8N884 522 aa9.65□□□□□ -0.87
RFX3-202ENST00000358730 THAP9Q9H5L6 903 aa9.65□□□□□ -0.87
RFX3-202ENST00000358730 ANKZF1Q9H8Y5 726 aa9.65□□□□□ -0.87
RFX3-202ENST00000358730 KBTBD4Q9NVX7 518 aa9.65□□□□□ -0.87
RFX3-202ENST00000358730 MYO1AQ9UBC5 1043 aa9.65□□□□□ -0.87
RFX3-202ENST00000358730 PALM3A6NDB9 673 aaPredicted RBP9.64□□□□□ -0.87
RFX3-202ENST00000358730 KLRF2D3W0D1 207 aa9.64□□□□□ -0.87
RFX3-202ENST00000358730 NDUFA10O95299 355 aa9.64□□□□□ -0.87
RFX3-202ENST00000358730 PLCG1P19174 1290 aa9.64□□□□□ -0.87
RFX3-202ENST00000358730 BRD3Q15059 726 aa9.64□□□□□ -0.87
RFX3-202ENST00000358730 LETM2Q2VYF4 491 aa9.64□□□□□ -0.87
RFX3-202ENST00000358730 RC3H1Q5TC82 1133 aaKnown RBP9.64□□□□□ -0.87
RFX3-202ENST00000358730 ZNF804AQ7Z570 1209 aa9.64□□□□□ -0.87
RFX3-202ENST00000358730 CABP7Q86V35 215 aa9.64□□□□□ -0.87
RFX3-202ENST00000358730 AMIGO3Q86WK7 504 aa9.64□□□□□ -0.87
RFX3-202ENST00000358730 GIMAP8Q8ND71 665 aaPredicted RBP9.64□□□□□ -0.87
RFX3-202ENST00000358730 LRRC15Q8TF66 581 aa9.64□□□□□ -0.87
RFX3-202ENST00000358730 FUT8Q9BYC5 575 aa9.64□□□□□ -0.87
RFX3-202ENST00000358730 TCP11L1Q9NUJ3 509 aa9.64□□□□□ -0.87
RFX3-202ENST00000358730 LUC7L2Q9Y383 392 aaKnown RBP9.64□□□□□ -0.87
RFX3-202ENST00000358730 EPN1Q9Y6I3 576 aaPredicted RBP9.64□□□□□ -0.87
RFX3-202ENST00000358730 SNED1Q8TER0 1413 aa9.64□□□□□ -0.87
RFX3-202ENST00000358730 POTEB2H3BUK9 544 aa9.64□□□□□ -0.87
RFX3-202ENST00000358730 CCNT1O60563 726 aaKnown RBP9.64□□□□□ -0.87
RFX3-202ENST00000358730 OR52Z1P0C646 297 aa9.64□□□□□ -0.87
RFX3-202ENST00000358730 PRPHP41219 470 aa9.64□□□□□ -0.87
RFX3-202ENST00000358730 TTI2Q6NXR4 508 aa9.64□□□□□ -0.87
RFX3-202ENST00000358730 PIAS4Q8N2W9 510 aaPredicted RBP9.64□□□□□ -0.87
RFX3-202ENST00000358730 OR8K1Q8NGG5 319 aa9.64□□□□□ -0.87
RFX3-202ENST00000358730 EEF2KMTQ96G04 330 aa9.64□□□□□ -0.87
RFX3-202ENST00000358730 LZTS2Q9BRK4 669 aa9.64□□□□□ -0.87
RFX3-202ENST00000358730 TRIM10Q9UDY6 481 aa9.64□□□□□ -0.87
RFX3-202ENST00000358730 CCNL1Q9UK58 526 aaPredicted RBP9.64□□□□□ -0.87
RFX3-202ENST00000358730 GUCA1BQ9UMX6 200 aa9.64□□□□□ -0.87
RFX3-202ENST00000358730 LEMD3Q9Y2U8 911 aa9.64□□□□□ -0.87
RFX3-202ENST00000358730 FLT1P17948 1338 aa9.64□□□□□ -0.87
RFX3-202ENST00000358730 DDX60LQ5H9U9 1706 aaKnown RBP9.64□□□□□ -0.87
RFX3-202ENST00000358730 A0A1W2PQC6 194 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 CCDC66A2RUB6 948 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 CTAGE15A4D2H0 777 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 B4DLN1 442 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 CTAGE8P0CG41 777 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 GRAPQ13588 217 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 TXNRD1Q16881 649 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 WHAMMP3Q1A5X7 153 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 TSR1Q2NL82 804 aaKnown RBP9.63□□□□□ -0.87
RFX3-202ENST00000358730 KRT25Q7Z3Z0 450 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 CTAGE6Q86UF2 777 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 CTAGE4Q8IX94 777 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 CSGALNACT2Q8N6G5 542 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 GRAPLQ8TC17 118 aaPredicted RBP9.63□□□□□ -0.87
RFX3-202ENST00000358730 ARHGEF1Q92888 912 aaKnown RBP9.63□□□□□ -0.87
RFX3-202ENST00000358730 PNKPQ96T60 521 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 EYA3Q99504 573 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 UBXN6Q9BZV1 441 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 ZMYND12Q9H0C1 365 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 CUEDC2Q9H467 287 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 MAGEF1Q9HAY2 307 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 ZNF287Q9HBT7 754 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 EXOC1Q9NV70 894 aa9.63□□□□□ -0.87
RFX3-202ENST00000358730 REXO2Q9Y3B8 237 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms