RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 PPFIA4O75335 1185 aa11.53□□□□□ -0.56
FXR1-202ENST00000357559 ZNF467Q7Z7K2 595 aaPredicted RBP11.53□□□□□ -0.56
FXR1-202ENST00000357559 NIM1KQ8IY84 436 aa11.53□□□□□ -0.56
FXR1-202ENST00000357559 RASEFQ8IZ41 740 aa11.53□□□□□ -0.56
FXR1-202ENST00000357559 BTG4Q9NY30 223 aa11.53□□□□□ -0.56
FXR1-202ENST00000357559 SEPT9Q9UHD8 586 aaPredicted RBP11.53□□□□□ -0.56
FXR1-202ENST00000357559 HEXIM1O94992 359 aaKnown RBP11.53□□□□□ -0.56
FXR1-202ENST00000357559 MAP2K2P36507 400 aa11.53□□□□□ -0.56
FXR1-202ENST00000357559 NLRP12P59046 1061 aa11.53□□□□□ -0.56
FXR1-202ENST00000357559 TBK1Q9UHD2 729 aa11.53□□□□□ -0.56
FXR1-202ENST00000357559 ZNF148Q9UQR1 794 aa11.53□□□□□ -0.56
FXR1-202ENST00000357559 CCDC85BQ15834 202 aaPredicted RBP11.53□□□□□ -0.56
FXR1-202ENST00000357559 STK32BQ9NY57 414 aa11.53□□□□□ -0.56
FXR1-202ENST00000357559 IGF1RP08069 1367 aa11.52□□□□□ -0.56
FXR1-202ENST00000357559 LIG3P49916 1009 aa11.52□□□□□ -0.56
FXR1-202ENST00000357559 UBXN2AP68543 259 aa11.52□□□□□ -0.56
FXR1-202ENST00000357559 ZKSCAN8Q15776 578 aaPredicted RBP11.52□□□□□ -0.56
FXR1-202ENST00000357559 HIP1RO75146 1068 aa11.52□□□□□ -0.56
FXR1-202ENST00000357559 RAP1GDS1P52306 607 aa11.52□□□□□ -0.56
FXR1-202ENST00000357559 BFSP1Q12934 665 aa11.52□□□□□ -0.56
FXR1-202ENST00000357559 PHLDB3Q6NSJ2 640 aa11.52□□□□□ -0.56
FXR1-202ENST00000357559 SCYL3Q8IZE3 742 aa11.52□□□□□ -0.56
FXR1-202ENST00000357559 ACTN1P12814 892 aa11.52□□□□□ -0.57
FXR1-202ENST00000357559 YWHAEP62258 255 aaKnown RBP11.52□□□□□ -0.57
FXR1-202ENST00000357559 NSUN2Q08J23 767 aaKnown RBP eCLIP11.52□□□□□ -0.57
FXR1-202ENST00000357559 ZNF654Q8IZM8 581 aa11.52□□□□□ -0.57
FXR1-202ENST00000357559 HLA-DPA1P20036 260 aa11.52□□□□□ -0.57
FXR1-202ENST00000357559 DAB2P98082 770 aa11.52□□□□□ -0.57
FXR1-202ENST00000357559 RSRC2Q7L4I2 434 aaKnown RBP11.52□□□□□ -0.57
FXR1-202ENST00000357559 C1orf112Q9NSG2 853 aa11.52□□□□□ -0.57
FXR1-202ENST00000357559 SLC4A7Q9Y6M7 1214 aa11.52□□□□□ -0.57
FXR1-202ENST00000357559 GADD45BO75293 160 aaPredicted RBP11.52□□□□□ -0.57
FXR1-202ENST00000357559 SOX5P35711 763 aa11.52□□□□□ -0.57
FXR1-202ENST00000357559 PPP2R5EQ16537 467 aa11.52□□□□□ -0.57
FXR1-202ENST00000357559 EPS15L1Q9UBC2 864 aa11.52□□□□□ -0.57
FXR1-202ENST00000357559 PPIP5K2O43314 1243 aa11.52□□□□□ -0.57
FXR1-202ENST00000357559 NCF2P19878 526 aaPredicted RBP11.52□□□□□ -0.57
FXR1-202ENST00000357559 STAT1P42224 750 aa11.52□□□□□ -0.57
FXR1-202ENST00000357559 PDE1BQ01064 536 aa11.52□□□□□ -0.57
FXR1-202ENST00000357559 ZC4H2Q9NQZ6 224 aa11.52□□□□□ -0.57
FXR1-202ENST00000357559 SLC13A4Q9UKG4 626 aa11.52□□□□□ -0.57
FXR1-202ENST00000357559 BCS1LQ9Y276 419 aa11.52□□□□□ -0.57
FXR1-202ENST00000357559 GPC4O75487 556 aa11.52□□□□□ -0.57
FXR1-202ENST00000357559 INHBAP08476 426 aa11.52□□□□□ -0.57
FXR1-202ENST00000357559 EEF1DP29692 281 aaKnown RBP11.52□□□□□ -0.57
FXR1-202ENST00000357559 CEP85Q6P2H3 762 aa11.52□□□□□ -0.57
FXR1-202ENST00000357559 CDC37L1Q7L3B6 337 aa11.52□□□□□ -0.57
FXR1-202ENST00000357559 NFE2L3Q9Y4A8 694 aa11.52□□□□□ -0.57
FXR1-202ENST00000357559 SMCO2A6NFE2 343 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 KCNA1Q09470 495 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 TEKT2Q9UIF3 430 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 ANGEL1Q9UNK9 670 aaKnown RBP11.51□□□□□ -0.57
FXR1-202ENST00000357559 EVI5O60447 810 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 TOM1O60784 492 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 TOM1L1O75674 476 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 TUBB4AP04350 444 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 POLA2Q14181 598 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 MTHFSDQ2M296 383 aaKnown RBP11.51□□□□□ -0.57
FXR1-202ENST00000357559 RBM46Q8TBY0 533 aaKnown RBP11.51□□□□□ -0.57
FXR1-202ENST00000357559 DISP3Q9P2K9 1392 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 TTC41PQ6P2S7 1318 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 CFLARO15519 480 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 POLR2FP61218 127 aaKnown RBP11.51□□□□□ -0.57
FXR1-202ENST00000357559 YWHAHQ04917 246 aaPredicted RBP11.51□□□□□ -0.57
FXR1-202ENST00000357559 NONOQ15233 471 aaKnown RBP eCLIP11.51□□□□□ -0.57
FXR1-202ENST00000357559 DOK7Q18PE1 504 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 ARHGAP27Q6ZUM4 889 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 DIS3L2Q8IYB7 885 aaKnown RBP11.51□□□□□ -0.57
FXR1-202ENST00000357559 ANKRD44Q8N8A2 993 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 DNAAF3Q8N9W5 541 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 GRK7Q8WTQ7 553 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 LRFN2Q9ULH4 789 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 TLR3O15455 904 aaKnown RBP11.51□□□□□ -0.57
FXR1-202ENST00000357559 ZNF75DP51815 510 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 ARHGDIAP52565 204 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 ADPGKQ9BRR6 497 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 KCNJ18B7U540 433 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 TMEM191BP0C7N4 346 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 GOLGA8HP0CJ92 632 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 CHMLP26374 656 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 KCNJ12Q14500 433 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 ZBTB8OSQ8IWT0 167 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 OTULINQ96BN8 352 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 PTPN21Q16825 1174 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 PI4K2BQ8TCG2 481 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 KRT27Q7Z3Y8 459 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 CADPS2Q86UW7 1296 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 FAN1Q9Y2M0 1017 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 SAR1BQ9Y6B6 198 aa11.51□□□□□ -0.57
FXR1-202ENST00000357559 OSTNP61366 133 aa11.5□□□□□ -0.57
FXR1-202ENST00000357559 TMED2Q15363 201 aa11.5□□□□□ -0.57
FXR1-202ENST00000357559 GPKOWQ92917 476 aaPredicted RBP eCLIP11.5□□□□□ -0.57
FXR1-202ENST00000357559 MORC3Q14149 939 aa11.5□□□□□ -0.57
FXR1-202ENST00000357559 FAM133BQ5BKY9 247 aaKnown RBP11.5□□□□□ -0.57
FXR1-202ENST00000357559 UBE2Q2Q8WVN8 375 aa11.5□□□□□ -0.57
FXR1-202ENST00000357559 USP40Q9NVE5 1235 aa11.5□□□□□ -0.57
FXR1-202ENST00000357559 RTEL1Q9NZ71 1219 aa11.5□□□□□ -0.57
FXR1-202ENST00000357559 HESX1Q9UBX0 185 aa11.5□□□□□ -0.57
FXR1-202ENST00000357559 FAM95CA0A1B0GW59 222 aa11.5□□□□□ -0.57
FXR1-202ENST00000357559 GTPBP10A4D1E9 387 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms