RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 GTPBP6O43824 516 aaPredicted RBP13.94□□□□□ -0.18
BDNF-202ENST00000356660 DNM2P50570 870 aa13.94□□□□□ -0.18
BDNF-202ENST00000356660 SPATA5Q8NB90 893 aa13.94□□□□□ -0.18
BDNF-202ENST00000356660 DYDC1Q8WWB3 177 aa13.94□□□□□ -0.18
BDNF-202ENST00000356660 SUFUQ9UMX1 484 aa13.94□□□□□ -0.18
BDNF-202ENST00000356660 HGSO14964 777 aaPredicted RBP13.93□□□□□ -0.18
BDNF-202ENST00000356660 ZNF18P17022 549 aa13.93□□□□□ -0.18
BDNF-202ENST00000356660 TSGA10Q9BZW7 698 aa13.93□□□□□ -0.18
BDNF-202ENST00000356660 KCNG1Q9UIX4 513 aa13.93□□□□□ -0.18
BDNF-202ENST00000356660 BAZ2BQ9UIF8 2168 aaKnown RBP13.93□□□□□ -0.18
BDNF-202ENST00000356660 ANKARQ7Z5J8 1434 aa13.93□□□□□ -0.18
BDNF-202ENST00000356660 KCNQ4P56696 695 aa13.93□□□□□ -0.18
BDNF-202ENST00000356660 ASAP1Q9ULH1 1129 aa13.93□□□□□ -0.18
BDNF-202ENST00000356660 TMEM131LA2VDJ0 1609 aa13.93□□□□□ -0.18
BDNF-202ENST00000356660 RFX7Q2KHR2 1363 aa13.93□□□□□ -0.18
BDNF-202ENST00000356660 PRCPP42785 496 aa13.93□□□□□ -0.18
BDNF-202ENST00000356660 ACTN3Q08043 901 aaPredicted RBP13.93□□□□□ -0.18
BDNF-202ENST00000356660 FAM47AQ5JRC9 791 aa13.93□□□□□ -0.18
BDNF-202ENST00000356660 TPTE2Q6XPS3 522 aa13.93□□□□□ -0.18
BDNF-202ENST00000356660 LRRC1Q9BTT6 524 aa13.93□□□□□ -0.18
BDNF-202ENST00000356660 SLAIN2Q9P270 581 aa13.93□□□□□ -0.18
BDNF-202ENST00000356660 RTL9Q8NET4 1388 aa13.93□□□□□ -0.18
BDNF-202ENST00000356660 RPSAP08865 295 aaKnown RBP13.93□□□□□ -0.18
BDNF-202ENST00000356660 TOB1P50616 345 aaPredicted RBP13.93□□□□□ -0.18
BDNF-202ENST00000356660 LETM2Q2VYF4 491 aa13.93□□□□□ -0.18
BDNF-202ENST00000356660 MSL1Q68DK7 614 aa13.93□□□□□ -0.18
BDNF-202ENST00000356660 DYMQ7RTS9 669 aa13.93□□□□□ -0.18
BDNF-202ENST00000356660 ARFGAP2Q8N6H7 521 aa13.93□□□□□ -0.18
BDNF-202ENST00000356660 CALML4Q96GE6 196 aa13.93□□□□□ -0.18
BDNF-202ENST00000356660 MLXIPQ9HAP2 919 aa13.93□□□□□ -0.18
BDNF-202ENST00000356660 BAIAP2L1Q9UHR4 511 aa13.93□□□□□ -0.18
BDNF-202ENST00000356660 RAB21Q9UL25 225 aa13.93□□□□□ -0.18
BDNF-202ENST00000356660 NFU1Q9UMS0 254 aa13.93□□□□□ -0.18
BDNF-202ENST00000356660 MYO5BQ9ULV0 1848 aa13.92□□□□□ -0.18
BDNF-202ENST00000356660 ACTN4O43707 911 aaKnown RBP13.92□□□□□ -0.18
BDNF-202ENST00000356660 CHRM1P11229 460 aaPredicted RBP13.92□□□□□ -0.18
BDNF-202ENST00000356660 CLNS1AP54105 237 aaKnown RBP13.92□□□□□ -0.18
BDNF-202ENST00000356660 RASSF7Q02833 373 aa13.92□□□□□ -0.18
BDNF-202ENST00000356660 BIRC2Q13490 618 aa13.92□□□□□ -0.18
BDNF-202ENST00000356660 PNMA8AQ86V59 439 aaPredicted RBP13.92□□□□□ -0.18
BDNF-202ENST00000356660 MB21D1Q8N884 522 aa13.92□□□□□ -0.18
BDNF-202ENST00000356660 SELENOSQ9BQE4 189 aa13.92□□□□□ -0.18
BDNF-202ENST00000356660 HYOU1Q9Y4L1 999 aa13.92□□□□□ -0.18
BDNF-202ENST00000356660 DUSP10Q9Y6W6 482 aa13.92□□□□□ -0.18
BDNF-202ENST00000356660 PLEKHG2Q9H7P9 1386 aa13.92□□□□□ -0.18
BDNF-202ENST00000356660 CYP2D7A0A087X1C5 515 aa13.92□□□□□ -0.18
BDNF-202ENST00000356660 BICDL2A1A5D9 508 aa13.92□□□□□ -0.18
BDNF-202ENST00000356660 GNPATO15228 680 aa13.92□□□□□ -0.18
BDNF-202ENST00000356660 ECM2O94769 699 aaPredicted RBP13.92□□□□□ -0.18
BDNF-202ENST00000356660 LIFRP42702 1097 aa13.92□□□□□ -0.18
BDNF-202ENST00000356660 PAK2Q13177 524 aa13.92□□□□□ -0.18
BDNF-202ENST00000356660 TCIRG1Q13488 830 aa13.92□□□□□ -0.18
BDNF-202ENST00000356660 UBE3CQ15386 1083 aa13.92□□□□□ -0.18
BDNF-202ENST00000356660 CFAP221Q4G0U5 840 aa13.92□□□□□ -0.18
BDNF-202ENST00000356660 NOX5Q96PH1 765 aa13.92□□□□□ -0.18
BDNF-202ENST00000356660 STRBPQ96SI9 672 aaKnown RBP13.92□□□□□ -0.18
BDNF-202ENST00000356660 TSG101Q99816 390 aa13.92□□□□□ -0.18
BDNF-202ENST00000356660 AATFQ9NY61 560 aaKnown RBP eCLIP13.92□□□□□ -0.18
BDNF-202ENST00000356660 NCK2O43639 380 aa13.92□□□□□ -0.18
BDNF-202ENST00000356660 NEBLO76041 1014 aa13.92□□□□□ -0.18
BDNF-202ENST00000356660 EIF6P56537 245 aaKnown RBP13.92□□□□□ -0.18
BDNF-202ENST00000356660 AMPD3Q01432 767 aa13.92□□□□□ -0.18
BDNF-202ENST00000356660 RAPGEF1Q13905 1077 aa13.92□□□□□ -0.18
BDNF-202ENST00000356660 TMEM266Q2M3C6 531 aa13.92□□□□□ -0.18
BDNF-202ENST00000356660 NFRKBQ6P4R8 1299 aa13.92□□□□□ -0.18
BDNF-202ENST00000356660 GPKOWQ92917 476 aaPredicted RBP eCLIP13.92□□□□□ -0.18
BDNF-202ENST00000356660 KRT12Q99456 494 aa13.92□□□□□ -0.18
BDNF-202ENST00000356660 CPSF2Q9P2I0 782 aaKnown RBP13.92□□□□□ -0.18
BDNF-202ENST00000356660 SAP30BPQ9UHR5 308 aaKnown RBP13.92□□□□□ -0.18
BDNF-202ENST00000356660 RWDD2AQ9UIY3 292 aa13.92□□□□□ -0.18
BDNF-202ENST00000356660 MYO1FO00160 1098 aa13.91□□□□□ -0.18
BDNF-202ENST00000356660 HEXIM1O94992 359 aaKnown RBP13.91□□□□□ -0.18
BDNF-202ENST00000356660 PLEKHA8P1O95397 391 aa13.91□□□□□ -0.18
BDNF-202ENST00000356660 KRT14P02533 472 aa13.91□□□□□ -0.18
BDNF-202ENST00000356660 GUCY1A3Q02108 690 aa13.91□□□□□ -0.18
BDNF-202ENST00000356660 IGDCC4Q8TDY8 1250 aa13.91□□□□□ -0.18
BDNF-202ENST00000356660 NUP58Q9BVL2 599 aa13.91□□□□□ -0.18
BDNF-202ENST00000356660 AGPAT5Q9NUQ2 364 aa13.91□□□□□ -0.18
BDNF-202ENST00000356660 BACH1O14867 736 aa13.91□□□□□ -0.18
BDNF-202ENST00000356660 CIAO1O76071 339 aa13.91□□□□□ -0.18
BDNF-202ENST00000356660 NAPAP54920 295 aa13.91□□□□□ -0.18
BDNF-202ENST00000356660 CCNI2Q6ZMN8 369 aaPredicted RBP13.91□□□□□ -0.18
BDNF-202ENST00000356660 SPAG5Q96R06 1193 aa13.91□□□□□ -0.18
BDNF-202ENST00000356660 RAB34Q9BZG1 259 aa13.91□□□□□ -0.18
BDNF-202ENST00000356660 EHD2Q9NZN4 543 aa13.91□□□□□ -0.18
BDNF-202ENST00000356660 HNRNPH1P31943 449 aaKnown RBP13.91□□□□□ -0.18
BDNF-202ENST00000356660 EPHB4P54760 987 aa13.91□□□□□ -0.18
BDNF-202ENST00000356660 ZNF658Q5TYW1 1059 aaPredicted RBP13.91□□□□□ -0.18
BDNF-202ENST00000356660 LCORLQ8N3X6 602 aa13.91□□□□□ -0.18
BDNF-202ENST00000356660 CNOT6LQ96LI5 555 aaKnown RBP13.91□□□□□ -0.18
BDNF-202ENST00000356660 DIP2CQ9Y2E4 1556 aa13.9□□□□□ -0.18
BDNF-202ENST00000356660 FGFR1OPO95684 399 aaKnown RBP13.9□□□□□ -0.18
BDNF-202ENST00000356660 TCP1P17987 556 aaKnown RBP13.9□□□□□ -0.18
BDNF-202ENST00000356660 GNAT2P19087 354 aa13.9□□□□□ -0.18
BDNF-202ENST00000356660 BCAMP50895 628 aa13.9□□□□□ -0.18
BDNF-202ENST00000356660 SF3B2Q13435 895 aaKnown RBP13.9□□□□□ -0.18
BDNF-202ENST00000356660 EZH2Q15910 746 aaKnown RBP13.9□□□□□ -0.18
BDNF-202ENST00000356660 FAM43BQ6ZT52 329 aaPredicted RBP13.9□□□□□ -0.18
BDNF-202ENST00000356660 RRP36Q96EU6 259 aaKnown RBP13.9□□□□□ -0.18
BDNF-202ENST00000356660 SLC39A2Q9NP94 309 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms