RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 NBPF11Q86T75 865 aa18.03■□□□□ 0.48
TRIM13-201ENST00000356017 CCAR1Q8IX12 1150 aaKnown RBP18.03■□□□□ 0.48
TRIM13-201ENST00000356017 CPXCR1Q8N123 301 aa18.03■□□□□ 0.48
TRIM13-201ENST00000356017 MTMR8Q96EF0 704 aa18.03■□□□□ 0.48
TRIM13-201ENST00000356017 RRP36Q96EU6 259 aaKnown RBP18.03■□□□□ 0.48
TRIM13-201ENST00000356017 RLFQ13129 1914 aa18.03■□□□□ 0.48
TRIM13-201ENST00000356017 ZBTB5O15062 677 aa18.02■□□□□ 0.48
TRIM13-201ENST00000356017 FKTNO75072 461 aa18.02■□□□□ 0.48
TRIM13-201ENST00000356017 ICAM1P05362 532 aa18.02■□□□□ 0.48
TRIM13-201ENST00000356017 CTCFP49711 727 aaPredicted RBP18.02■□□□□ 0.48
TRIM13-201ENST00000356017 CDC37Q16543 378 aaPredicted RBP18.02■□□□□ 0.48
TRIM13-201ENST00000356017 ME3Q16798 604 aa18.02■□□□□ 0.48
TRIM13-201ENST00000356017 RIOX2Q8IUF8 465 aa18.02■□□□□ 0.48
TRIM13-201ENST00000356017 CCDC82Q8N4S0 544 aa18.02■□□□□ 0.48
TRIM13-201ENST00000356017 SHCBP1Q8NEM2 672 aa18.02■□□□□ 0.48
TRIM13-201ENST00000356017 RAVER2Q9HCJ3 691 aaKnown RBP18.02■□□□□ 0.48
TRIM13-201ENST00000356017 SEC63Q9UGP8 760 aaKnown RBP18.02■□□□□ 0.48
TRIM13-201ENST00000356017 TSKSQ9UJT2 592 aa18.02■□□□□ 0.48
TRIM13-201ENST00000356017 PNMA6FA0A0J9YX94 578 aa18.01■□□□□ 0.47
TRIM13-201ENST00000356017 CDKL5O76039 1030 aa18.01■□□□□ 0.47
TRIM13-201ENST00000356017 MAPK4P31152 587 aa18.01■□□□□ 0.47
TRIM13-201ENST00000356017 SCRN1Q12765 414 aa18.01■□□□□ 0.47
TRIM13-201ENST00000356017 ARHGEF6Q15052 776 aa18.01■□□□□ 0.47
TRIM13-201ENST00000356017 SNRNP48Q6IEG0 339 aaKnown RBP18.01■□□□□ 0.47
TRIM13-201ENST00000356017 CCDC174Q6PII3 467 aa18.01■□□□□ 0.47
TRIM13-201ENST00000356017 CMTR1Q8N1G2 835 aaKnown RBP18.01■□□□□ 0.47
TRIM13-201ENST00000356017 ERO1AQ96HE7 468 aa18.01■□□□□ 0.47
TRIM13-201ENST00000356017 MOV10L1Q9BXT6 1211 aaKnown RBP18.01■□□□□ 0.47
TRIM13-201ENST00000356017 NCOA5Q9HCD5 579 aaKnown RBP18.01■□□□□ 0.47
TRIM13-201ENST00000356017 RBM27Q9P2N5 1060 aaKnown RBP18.01■□□□□ 0.47
TRIM13-201ENST00000356017 PARP14Q460N5 1801 aa18.01■□□□□ 0.47
TRIM13-201ENST00000356017 ZNF536O15090 1300 aa18.01■□□□□ 0.47
TRIM13-201ENST00000356017 FOXN1O15353 648 aa18.01■□□□□ 0.47
TRIM13-201ENST00000356017 IFNAR1P17181 557 aa18.01■□□□□ 0.47
TRIM13-201ENST00000356017 SNAP25P60880 206 aa18.01■□□□□ 0.47
TRIM13-201ENST00000356017 LACTBP83111 547 aaPredicted RBP18.01■□□□□ 0.47
TRIM13-201ENST00000356017 SLC35G1Q2M3R5 365 aa18.01■□□□□ 0.47
TRIM13-201ENST00000356017 QRICH1Q2TAL8 776 aa18.01■□□□□ 0.47
TRIM13-201ENST00000356017 TKFCQ3LXA3 575 aa18.01■□□□□ 0.47
TRIM13-201ENST00000356017 HOMER1Q86YM7 354 aa18.01■□□□□ 0.47
TRIM13-201ENST00000356017 ZNF296Q8WUU4 475 aaPredicted RBP18.01■□□□□ 0.47
TRIM13-201ENST00000356017 GTF3C6Q969F1 213 aa18.01■□□□□ 0.47
TRIM13-201ENST00000356017 PIGSQ96S52 555 aa18.01■□□□□ 0.47
TRIM13-201ENST00000356017 AMNQ9BXJ7 453 aa18.01■□□□□ 0.47
TRIM13-201ENST00000356017 MROH8Q9H579 483 aa18.01■□□□□ 0.47
TRIM13-201ENST00000356017 CCPG1Q9ULG6 757 aa18.01■□□□□ 0.47
TRIM13-201ENST00000356017 A0A0G2JMZ2 1700 aa18■□□□□ 0.47
TRIM13-201ENST00000356017 PEX10O60683 326 aa18■□□□□ 0.47
TRIM13-201ENST00000356017 AKAP17AQ02040 695 aaKnown RBP18■□□□□ 0.47
TRIM13-201ENST00000356017 FUT2Q10981 343 aa18■□□□□ 0.47
TRIM13-201ENST00000356017 FBXO11Q86XK2 927 aa18■□□□□ 0.47
TRIM13-201ENST00000356017 TRIM22Q8IYM9 498 aa18■□□□□ 0.47
TRIM13-201ENST00000356017 AGBL1Q96MI9 1066 aa18■□□□□ 0.47
TRIM13-201ENST00000356017 CWC22Q9HCG8 908 aaKnown RBP18■□□□□ 0.47
TRIM13-201ENST00000356017 FBXO40Q9UH90 709 aa18■□□□□ 0.47
TRIM13-201ENST00000356017 ERCC3P19447 782 aa17.99■□□□□ 0.47
TRIM13-201ENST00000356017 FCGRTP55899 365 aa17.99■□□□□ 0.47
TRIM13-201ENST00000356017 NTRK3Q16288 839 aa17.99■□□□□ 0.47
TRIM13-201ENST00000356017 NCAPG2Q86XI2 1143 aa17.99■□□□□ 0.47
TRIM13-201ENST00000356017 CHST13Q8NET6 341 aa17.99■□□□□ 0.47
TRIM13-201ENST00000356017 RNF26Q9BY78 433 aaPredicted RBP17.99■□□□□ 0.47
TRIM13-201ENST00000356017 V9GY48 417 aaPredicted RBP17.99■□□□□ 0.47
TRIM13-201ENST00000356017 CNTNAP5Q8WYK1 1306 aa17.98■□□□□ 0.47
TRIM13-201ENST00000356017 PRPF3O43395 683 aaKnown RBP17.98■□□□□ 0.47
TRIM13-201ENST00000356017 LARGE1O95461 756 aa17.98■□□□□ 0.47
TRIM13-201ENST00000356017 GNRH1P01148 92 aa17.98■□□□□ 0.47
TRIM13-201ENST00000356017 HSPA8P11142 646 aaKnown RBP17.98■□□□□ 0.47
TRIM13-201ENST00000356017 SLC4A3P48751 1232 aa17.98■□□□□ 0.47
TRIM13-201ENST00000356017 NECAB1Q8N987 351 aa17.98■□□□□ 0.47
TRIM13-201ENST00000356017 PORCNQ9H237 461 aa17.98■□□□□ 0.47
TRIM13-201ENST00000356017 IVNS1ABPQ9Y6Y0 642 aa17.98■□□□□ 0.47
TRIM13-201ENST00000356017 STRNO43815 780 aa17.98■□□□□ 0.47
TRIM13-201ENST00000356017 CD2BP2O95400 341 aaKnown RBP17.98■□□□□ 0.47
TRIM13-201ENST00000356017 FMNL1O95466 1100 aaPredicted RBP17.98■□□□□ 0.47
TRIM13-201ENST00000356017 ALAS1P13196 640 aa17.98■□□□□ 0.47
TRIM13-201ENST00000356017 PSMC4P43686 418 aa17.98■□□□□ 0.47
TRIM13-201ENST00000356017 SSRP1Q08945 709 aaKnown RBP17.98■□□□□ 0.47
TRIM13-201ENST00000356017 WDR78Q5VTH9 848 aa17.98■□□□□ 0.47
TRIM13-201ENST00000356017 PIBF1Q8WXW3 757 aa17.98■□□□□ 0.47
TRIM13-201ENST00000356017 COA7Q96BR5 231 aa17.98■□□□□ 0.47
TRIM13-201ENST00000356017 TRERF1Q96PN7 1200 aa17.98■□□□□ 0.47
TRIM13-201ENST00000356017 EFCC1Q9HA90 598 aa17.98■□□□□ 0.47
TRIM13-201ENST00000356017 RIPK3Q9Y572 518 aa17.98■□□□□ 0.47
TRIM13-201ENST00000356017 PCDHA1Q9Y5I3 950 aa17.98■□□□□ 0.47
TRIM13-201ENST00000356017 ABCB11O95342 1321 aa17.97■□□□□ 0.47
TRIM13-201ENST00000356017 hCG_1984214I3L0E3 225 aa17.97■□□□□ 0.47
TRIM13-201ENST00000356017 TNPO2O14787 897 aaKnown RBP17.97■□□□□ 0.47
TRIM13-201ENST00000356017 USH1GQ495M9 461 aa17.97■□□□□ 0.47
TRIM13-201ENST00000356017 ZNF713Q8N859 430 aaPredicted RBP17.97■□□□□ 0.47
TRIM13-201ENST00000356017 PHKBQ93100 1093 aa17.97■□□□□ 0.47
TRIM13-201ENST00000356017 SNX21Q969T3 373 aa17.97■□□□□ 0.47
TRIM13-201ENST00000356017 TMX3Q96JJ7 454 aa17.97■□□□□ 0.47
TRIM13-201ENST00000356017 LLPHQ9BRT6 129 aaKnown RBP17.97■□□□□ 0.47
TRIM13-201ENST00000356017 MAF1Q9H063 256 aa17.97■□□□□ 0.47
TRIM13-201ENST00000356017 ACAD9Q9H845 621 aa17.97■□□□□ 0.47
TRIM13-201ENST00000356017 MRPL11Q9Y3B7 192 aaKnown RBP17.97■□□□□ 0.47
TRIM13-201ENST00000356017 FCER1AP12319 257 aa17.96■□□□□ 0.47
TRIM13-201ENST00000356017 HOXD10P28358 340 aa17.96■□□□□ 0.47
TRIM13-201ENST00000356017 LBX1P52954 281 aa17.96■□□□□ 0.47
TRIM13-201ENST00000356017 GPR142Q7Z601 462 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms