RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 AMPD2Q01433 879 aa15.18■□□□□ 0.02
TRIM4-203ENST00000355947 PUM3Q15397 648 aaKnown RBP15.18■□□□□ 0.02
TRIM4-203ENST00000355947 FERMT2Q96AC1 680 aa15.18■□□□□ 0.02
TRIM4-203ENST00000355947 SCLT1Q96NL6 688 aa15.18■□□□□ 0.02
TRIM4-203ENST00000355947 MTRQ99707 1265 aa15.18■□□□□ 0.02
TRIM4-203ENST00000355947 LTN1O94822 1766 aa15.17■□□□□ 0.02
TRIM4-203ENST00000355947 FAM237AA0A1B0GTK4 181 aa15.17■□□□□ 0.02
TRIM4-203ENST00000355947 NKRFO15226 690 aaKnown RBP eCLIP15.17■□□□□ 0.02
TRIM4-203ENST00000355947 GTPBP6O43824 516 aaPredicted RBP15.17■□□□□ 0.02
TRIM4-203ENST00000355947 GOLGA8HP0CJ92 632 aa15.17■□□□□ 0.02
TRIM4-203ENST00000355947 NT5DC1Q5TFE4 455 aa15.17■□□□□ 0.02
TRIM4-203ENST00000355947 IQCEQ6IPM2 695 aa15.17■□□□□ 0.02
TRIM4-203ENST00000355947 MYCBPQ99417 103 aaPredicted RBP15.17■□□□□ 0.02
TRIM4-203ENST00000355947 RWDD2AQ9UIY3 292 aa15.17■□□□□ 0.02
TRIM4-203ENST00000355947 SMIM23A6NLE4 172 aa15.17■□□□□ 0.02
TRIM4-203ENST00000355947 E7EVH7 732 aa15.17■□□□□ 0.02
TRIM4-203ENST00000355947 FCER1AP12319 257 aa15.17■□□□□ 0.02
TRIM4-203ENST00000355947 TUBB2AQ13885 445 aa15.17■□□□□ 0.02
TRIM4-203ENST00000355947 LETM2Q2VYF4 491 aa15.17■□□□□ 0.02
TRIM4-203ENST00000355947 DTHD1Q6ZMT9 781 aa15.17■□□□□ 0.02
TRIM4-203ENST00000355947 EP400NLQ6ZTU2 488 aa15.17■□□□□ 0.02
TRIM4-203ENST00000355947 TSEN2Q8NCE0 465 aaKnown RBP15.17■□□□□ 0.02
TRIM4-203ENST00000355947 CNOT6LQ96LI5 555 aaKnown RBP15.17■□□□□ 0.02
TRIM4-203ENST00000355947 TUBB2BQ9BVA1 445 aa15.17■□□□□ 0.02
TRIM4-203ENST00000355947 EXOC1Q9NV70 894 aa15.17■□□□□ 0.02
TRIM4-203ENST00000355947 TBC1D7Q9P0N9 293 aa15.17■□□□□ 0.02
TRIM4-203ENST00000355947 STX8Q9UNK0 236 aa15.17■□□□□ 0.02
TRIM4-203ENST00000355947 MARCH6O60337 910 aa15.16■□□□□ 0.02
TRIM4-203ENST00000355947 PCCAP05165 728 aaPredicted RBP15.16■□□□□ 0.02
TRIM4-203ENST00000355947 MAP2K2P36507 400 aa15.16■□□□□ 0.02
TRIM4-203ENST00000355947 PBX1P40424 430 aa15.16■□□□□ 0.02
TRIM4-203ENST00000355947 MAGEA1P43355 309 aa15.16■□□□□ 0.02
TRIM4-203ENST00000355947 NNTQ13423 1086 aa15.16■□□□□ 0.02
TRIM4-203ENST00000355947 CCDC155Q8N6L0 562 aa15.16■□□□□ 0.02
TRIM4-203ENST00000355947 ZNF579Q8NAF0 562 aaKnown RBP15.16■□□□□ 0.02
TRIM4-203ENST00000355947 EPB41L5Q9HCM4 733 aa15.16■□□□□ 0.02
TRIM4-203ENST00000355947 NUTM2BA6NNL0 878 aaPredicted RBP15.16■□□□□ 0.02
TRIM4-203ENST00000355947 NUTM2EB1AL46 878 aaPredicted RBP15.16■□□□□ 0.02
TRIM4-203ENST00000355947 HGSO14964 777 aaPredicted RBP15.16■□□□□ 0.02
TRIM4-203ENST00000355947 HNRNPH1P31943 449 aaKnown RBP15.16■□□□□ 0.02
TRIM4-203ENST00000355947 LRRC41Q15345 812 aa15.16■□□□□ 0.02
TRIM4-203ENST00000355947 ZNF658Q5TYW1 1059 aaPredicted RBP15.16■□□□□ 0.02
TRIM4-203ENST00000355947 FBXL16Q8N461 479 aa15.16■□□□□ 0.02
TRIM4-203ENST00000355947 ZSCAN10Q96SZ4 725 aaPredicted RBP15.16■□□□□ 0.02
TRIM4-203ENST00000355947 TRIM31Q9BZY9 425 aa15.16■□□□□ 0.02
TRIM4-203ENST00000355947 RMND1Q9NWS8 449 aa15.16■□□□□ 0.02
TRIM4-203ENST00000355947 STARD3NLO95772 234 aa15.16■□□□□ 0.02
TRIM4-203ENST00000355947 CYP2D6P10635 497 aa15.16■□□□□ 0.02
TRIM4-203ENST00000355947 EIF4A3P38919 411 aaKnown RBP15.16■□□□□ 0.02
TRIM4-203ENST00000355947 PPFIA1Q13136 1202 aa15.16■□□□□ 0.02
TRIM4-203ENST00000355947 MCTP2Q6DN12 878 aa15.16■□□□□ 0.02
TRIM4-203ENST00000355947 TMTC2Q8N394 836 aa15.16■□□□□ 0.02
TRIM4-203ENST00000355947 LPIN2Q92539 896 aa15.16■□□□□ 0.02
TRIM4-203ENST00000355947 CCDC47Q96A33 483 aaKnown RBP15.16■□□□□ 0.02
TRIM4-203ENST00000355947 GOLPH3Q9H4A6 298 aa15.16■□□□□ 0.02
TRIM4-203ENST00000355947 CD248Q9HCU0 757 aa15.16■□□□□ 0.02
TRIM4-203ENST00000355947 LIMA1Q9UHB6 759 aaKnown RBP15.16■□□□□ 0.02
TRIM4-203ENST00000355947 E2F5Q15329 346 aa15.15■□□□□ 0.02
TRIM4-203ENST00000355947 WDR59Q6PJI9 974 aa15.15■□□□□ 0.02
TRIM4-203ENST00000355947 EHBP1Q8NDI1 1231 aa15.15■□□□□ 0.02
TRIM4-203ENST00000355947 FAM184BQ9ULE4 1060 aa15.15■□□□□ 0.02
TRIM4-203ENST00000355947 AGPSO00116 658 aa15.15■□□□□ 0.02
TRIM4-203ENST00000355947 OPA1O60313 960 aa15.15■□□□□ 0.02
TRIM4-203ENST00000355947 VAV2P52735 878 aa15.15■□□□□ 0.02
TRIM4-203ENST00000355947 TRIM14Q14142 442 aa15.15■□□□□ 0.02
TRIM4-203ENST00000355947 ADGRA1Q86SQ6 560 aa15.15■□□□□ 0.02
TRIM4-203ENST00000355947 NLRP10Q86W26 655 aa15.15■□□□□ 0.02
TRIM4-203ENST00000355947 OR2W6PQ8NHA6 318 aa15.15■□□□□ 0.02
TRIM4-203ENST00000355947 GIMAP7Q8NHV1 300 aa15.15■□□□□ 0.02
TRIM4-203ENST00000355947 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.15■□□□□ 0.02
TRIM4-203ENST00000355947 ZBTB1Q9Y2K1 713 aa15.15■□□□□ 0.02
TRIM4-203ENST00000355947 LGALS16A8MUM7 142 aa15.15■□□□□ 0.02
TRIM4-203ENST00000355947 PRPF6O94906 941 aaKnown RBP15.15■□□□□ 0.02
TRIM4-203ENST00000355947 PKN1Q16512 942 aa15.15■□□□□ 0.02
TRIM4-203ENST00000355947 CEP85LQ5SZL2 805 aa15.15■□□□□ 0.02
TRIM4-203ENST00000355947 WDR93Q6P2C0 686 aa15.15■□□□□ 0.02
TRIM4-203ENST00000355947 ALS2CR12Q96Q35 445 aa15.15■□□□□ 0.02
TRIM4-203ENST00000355947 KRT12Q99456 494 aa15.15■□□□□ 0.02
TRIM4-203ENST00000355947 ISCA1Q9BUE6 129 aa15.15■□□□□ 0.02
TRIM4-203ENST00000355947 RNF26Q9BY78 433 aaPredicted RBP15.15■□□□□ 0.02
TRIM4-203ENST00000355947 MYO1AQ9UBC5 1043 aa15.15■□□□□ 0.02
TRIM4-203ENST00000355947 TUBBP07437 444 aa15.14■□□□□ 0.01
TRIM4-203ENST00000355947 TRADDQ15628 312 aa15.14■□□□□ 0.01
TRIM4-203ENST00000355947 CT47A1Q5JQC4 288 aaPredicted RBP15.14■□□□□ 0.01
TRIM4-203ENST00000355947 KIRREL3Q8IZU9 778 aa15.14■□□□□ 0.01
TRIM4-203ENST00000355947 SRBD1Q8N5C6 995 aaKnown RBP15.14■□□□□ 0.01
TRIM4-203ENST00000355947 SPATA4Q8NEY3 305 aa15.14■□□□□ 0.01
TRIM4-203ENST00000355947 H7C1D1 291 aa15.14■□□□□ 0.01
TRIM4-203ENST00000355947 CARSP49589 748 aaKnown RBP15.14■□□□□ 0.01
TRIM4-203ENST00000355947 CDR1P51861 262 aa15.14■□□□□ 0.01
TRIM4-203ENST00000355947 GFPT1Q06210 699 aaPredicted RBP15.14■□□□□ 0.01
TRIM4-203ENST00000355947 GBP6Q6ZN66 633 aa15.14■□□□□ 0.01
TRIM4-203ENST00000355947 RBM12Q9NTZ6 932 aaKnown RBP15.14■□□□□ 0.01
TRIM4-203ENST00000355947 STK36Q9NRP7 1315 aa15.14■□□□□ 0.01
TRIM4-203ENST00000355947 ARHGAP23Q9P227 1491 aa15.14■□□□□ 0.01
TRIM4-203ENST00000355947 GOLGA6L7A0A1B0GV03 622 aa15.13■□□□□ 0.01
TRIM4-203ENST00000355947 HEXIM1O94992 359 aaKnown RBP15.13■□□□□ 0.01
TRIM4-203ENST00000355947 IGHMBP2P38935 993 aaKnown RBP15.13■□□□□ 0.01
TRIM4-203ENST00000355947 IL17AQ16552 155 aa15.13■□□□□ 0.01
TRIM4-203ENST00000355947 CCDC91Q7Z6B0 441 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms