RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 PDIA6Q15084 440 aa8.74□□□□□ -1.01
CD46-203ENST00000354848 RABL6Q3YEC7 729 aaPredicted RBP8.74□□□□□ -1.01
CD46-203ENST00000354848 CCDC181Q5TID7 509 aa8.74□□□□□ -1.01
CD46-203ENST00000354848 MSL1Q68DK7 614 aa8.74□□□□□ -1.01
CD46-203ENST00000354848 IFT20Q8IY31 132 aa8.74□□□□□ -1.01
CD46-203ENST00000354848 STAMQ92783 540 aa8.74□□□□□ -1.01
CD46-203ENST00000354848 HVCN1Q96D96 273 aa8.74□□□□□ -1.01
CD46-203ENST00000354848 MYL10Q9BUA6 226 aa8.74□□□□□ -1.01
CD46-203ENST00000354848 GDF3Q9NR23 364 aa8.74□□□□□ -1.01
CD46-203ENST00000354848 RBM12Q9NTZ6 932 aaKnown RBP8.74□□□□□ -1.01
CD46-203ENST00000354848 VPS54Q9P1Q0 977 aa8.74□□□□□ -1.01
CD46-203ENST00000354848 C15orf41Q9Y2V0 281 aa8.74□□□□□ -1.01
CD46-203ENST00000354848 MYH7P12883 1935 aa8.74□□□□□ -1.01
CD46-203ENST00000354848 ESYT3A0FGR9 886 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 ZBTB43O43298 467 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 CLSTN1O94985 981 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 GUCY1A2P33402 732 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 PDE6BP35913 854 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 GUCY2FP51841 1108 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 PAK1Q13153 545 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 NR5A1Q13285 461 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 SAFBQ15424 915 aaKnown RBP eCLIP8.73□□□□□ -1.016e-6■□□□□ 10.7
CD46-203ENST00000354848 WASHC4Q2M389 1173 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 CAPRIN2Q6IMN6 1127 aaKnown RBP8.73□□□□□ -1.01
CD46-203ENST00000354848 HIBCHQ6NVY1 386 aaPredicted RBP8.73□□□□□ -1.01
CD46-203ENST00000354848 MIS18BP1Q6P0N0 1132 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.73□□□□□ -1.01
CD46-203ENST00000354848 CACNA2D3Q8IZS8 1091 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 ARFGAP2Q8N6H7 521 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 SPDYE1Q8NFV5 336 aaPredicted RBP8.73□□□□□ -1.01
CD46-203ENST00000354848 IFT81Q8WYA0 676 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 CCT6BQ92526 530 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 SPAG5Q96R06 1193 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 HOMER3Q9NSC5 361 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 AGPAT5Q9NUQ2 364 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 AATFQ9NY61 560 aaKnown RBP eCLIP8.73□□□□□ -1.014e-6■□□□□ 10.1
CD46-203ENST00000354848 SLC12A6Q9UHW9 1150 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 C5orf60A6NFR6 353 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 PECAM1P16284 738 aaPredicted RBP8.73□□□□□ -1.01
CD46-203ENST00000354848 TCP1P17987 556 aaKnown RBP8.73□□□□□ -1.01
CD46-203ENST00000354848 PIP4K2AP48426 406 aaPredicted RBP8.73□□□□□ -1.01
CD46-203ENST00000354848 NLRP6P59044 892 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 SSRP1Q08945 709 aaKnown RBP8.73□□□□□ -1.01
CD46-203ENST00000354848 RBBP5Q15291 538 aaKnown RBP8.73□□□□□ -1.01
CD46-203ENST00000354848 CRELD2Q6UXH1 353 aaPredicted RBP8.73□□□□□ -1.01
CD46-203ENST00000354848 CCDC170Q8IYT3 715 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 CCDC47Q96A33 483 aaKnown RBP8.73□□□□□ -1.01
CD46-203ENST00000354848 TMBIM4Q9HC24 238 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 EPB41L5Q9HCM4 733 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 LRWD1Q9UFC0 647 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 CEP131Q9UPN4 1083 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 RGPD8O14715 1765 aaPredicted RBP8.73□□□□□ -1.01
CD46-203ENST00000354848 MARF1Q9Y4F3 1742 aaKnown RBP8.73□□□□□ -1.01
CD46-203ENST00000354848 A0A1W2PQC6 194 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 GOLGA8AA7E2F4 631 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 PES1O00541 588 aaKnown RBP8.73□□□□□ -1.01
CD46-203ENST00000354848 BACH1O14867 736 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 TACC1O75410 805 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 SMNDC1O75940 238 aaKnown RBP eCLIP8.73□□□□□ -1.012e-8■□□□□ 9.9
CD46-203ENST00000354848 ANP32DO95626 131 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 CSB-PGBD3P0DP91 1061 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 GHRP10912 638 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 CDC25CP30307 473 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 PAK2Q13177 524 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 PPP1R7Q15435 360 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 MAATS1Q7Z4T9 603 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 IRF2BP1Q8IU81 584 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 ZNF507Q8TCN5 953 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 NELFBQ8WX92 580 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 P3H4Q92791 437 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 SYMPKQ92797 1274 aaKnown RBP8.73□□□□□ -1.01
CD46-203ENST00000354848 TSGA10Q9BZW7 698 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 FOXP1Q9H334 677 aaPredicted RBP8.73□□□□□ -1.01
CD46-203ENST00000354848 PLAAQ9Y263 795 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 HYOU1Q9Y4L1 999 aa8.73□□□□□ -1.01
CD46-203ENST00000354848 STK36Q9NRP7 1315 aa8.72□□□□□ -1.01
CD46-203ENST00000354848 LGALS16A8MUM7 142 aa8.72□□□□□ -1.01
CD46-203ENST00000354848 MPHOSPH10O00566 681 aaKnown RBP8.72□□□□□ -1.01
CD46-203ENST00000354848 ZNF263O14978 683 aa8.72□□□□□ -1.01
CD46-203ENST00000354848 PPIP5K2O43314 1243 aa8.72□□□□□ -1.01
CD46-203ENST00000354848 HEXIM1O94992 359 aaKnown RBP8.72□□□□□ -1.01
CD46-203ENST00000354848 PARP1P09874 1014 aaKnown RBP8.72□□□□□ -1.01
CD46-203ENST00000354848 TMOD1P28289 359 aa8.72□□□□□ -1.01
CD46-203ENST00000354848 PAFAH1B1P43034 410 aa8.72□□□□□ -1.01
CD46-203ENST00000354848 GUCY2DQ02846 1103 aa8.72□□□□□ -1.01
CD46-203ENST00000354848 ITFG2Q969R8 447 aa8.72□□□□□ -1.01
CD46-203ENST00000354848 ACSBG1Q96GR2 724 aa8.72□□□□□ -1.01
CD46-203ENST00000354848 METTL22Q9BUU2 404 aaPredicted RBP8.72□□□□□ -1.01
CD46-203ENST00000354848 BLZF1Q9H2G9 400 aa8.72□□□□□ -1.01
CD46-203ENST00000354848 KDM4CQ9H3R0 1056 aa8.72□□□□□ -1.01
CD46-203ENST00000354848 MLXIPQ9HAP2 919 aa8.72□□□□□ -1.01
CD46-203ENST00000354848 CPSF2Q9P2I0 782 aaKnown RBP8.72□□□□□ -1.01
CD46-203ENST00000354848 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.72□□□□□ -1.01
CD46-203ENST00000354848 L3MBTL1Q9Y468 752 aa8.72□□□□□ -1.01
CD46-203ENST00000354848 MOCS3O95396 460 aa8.72□□□□□ -1.01
CD46-203ENST00000354848 FMNL1O95466 1100 aaPredicted RBP8.72□□□□□ -1.01
CD46-203ENST00000354848 CDC37Q16543 378 aaPredicted RBP8.72□□□□□ -1.01
CD46-203ENST00000354848 CCDC96Q2M329 555 aa8.72□□□□□ -1.01
CD46-203ENST00000354848 AKAP4Q5JQC9 854 aa8.72□□□□□ -1.01
CD46-203ENST00000354848 ATG9AQ7Z3C6 839 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms