RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 MFSD6Q6ZSS7 791 aa13.54□□□□□ -0.24
CDRT1-202ENST00000354433 ARRDC4Q8NCT1 418 aa13.54□□□□□ -0.24
CDRT1-202ENST00000354433 RNF41Q9H4P4 317 aaPredicted RBP13.54□□□□□ -0.24
CDRT1-202ENST00000354433 DIS3Q9Y2L1 958 aaKnown RBP13.54□□□□□ -0.24
CDRT1-202ENST00000354433 FDX1P10109 184 aa13.53□□□□□ -0.24
CDRT1-202ENST00000354433 RARBP10826 455 aa13.53□□□□□ -0.24
CDRT1-202ENST00000354433 RABEP1Q15276 862 aa13.53□□□□□ -0.24
CDRT1-202ENST00000354433 LRRC26Q2I0M4 334 aa13.53□□□□□ -0.24
CDRT1-202ENST00000354433 CCDC174Q6PII3 467 aa13.53□□□□□ -0.24
CDRT1-202ENST00000354433 CHST13Q8NET6 341 aa13.53□□□□□ -0.24
CDRT1-202ENST00000354433 STAG1Q8WVM7 1258 aa13.53□□□□□ -0.24
CDRT1-202ENST00000354433 IL17RAQ96F46 866 aa13.53□□□□□ -0.24
CDRT1-202ENST00000354433 ZHX1Q9UKY1 873 aaPredicted RBP13.53□□□□□ -0.24
CDRT1-202ENST00000354433 TACC3Q9Y6A5 838 aa13.53□□□□□ -0.24
CDRT1-202ENST00000354433 RANBP2P49792 3224 aaKnown RBP13.53□□□□□ -0.24
CDRT1-202ENST00000354433 ZNF213O14771 459 aa13.52□□□□□ -0.25
CDRT1-202ENST00000354433 SGSM2O43147 1006 aa13.52□□□□□ -0.25
CDRT1-202ENST00000354433 IGHA2P01877 340 aa13.52□□□□□ -0.25
CDRT1-202ENST00000354433 AKR1A1P14550 325 aa13.52□□□□□ -0.25
CDRT1-202ENST00000354433 ANAPC15P60006 121 aa13.52□□□□□ -0.25
CDRT1-202ENST00000354433 AKNAD1Q5T1N1 836 aa13.52□□□□□ -0.25
CDRT1-202ENST00000354433 TBC1D10CQ8IV04 446 aa13.52□□□□□ -0.25
CDRT1-202ENST00000354433 ACAD9Q9H845 621 aa13.52□□□□□ -0.25
CDRT1-202ENST00000354433 XPNPEP3Q9NQH7 507 aa13.52□□□□□ -0.25
CDRT1-202ENST00000354433 RNF146Q9NTX7 359 aa13.52□□□□□ -0.25
CDRT1-202ENST00000354433 NRBP1Q9UHY1 535 aa13.52□□□□□ -0.25
CDRT1-202ENST00000354433 FRMPD3Q5JV73 1810 aa13.52□□□□□ -0.25
CDRT1-202ENST00000354433 TRIOBPQ9H2D6 2365 aa13.52□□□□□ -0.25
CDRT1-202ENST00000354433 FRMPD2Q68DX3 1309 aaPredicted RBP13.52□□□□□ -0.25
CDRT1-202ENST00000354433 RAD50Q92878 1312 aa13.52□□□□□ -0.25
CDRT1-202ENST00000354433 FGRP09769 529 aa13.51□□□□□ -0.25
CDRT1-202ENST00000354433 TOP1P11387 765 aaKnown RBP13.51□□□□□ -0.25
CDRT1-202ENST00000354433 ALAS1P13196 640 aa13.51□□□□□ -0.25
CDRT1-202ENST00000354433 RCSD1Q6JBY9 416 aa13.51□□□□□ -0.25
CDRT1-202ENST00000354433 HSCBQ8IWL3 235 aa13.51□□□□□ -0.25
CDRT1-202ENST00000354433 DCAF4Q8WV16 495 aa13.51□□□□□ -0.25
CDRT1-202ENST00000354433 ESR2Q92731 530 aa13.51□□□□□ -0.25
CDRT1-202ENST00000354433 AGBL1Q96MI9 1066 aa13.51□□□□□ -0.25
CDRT1-202ENST00000354433 PCDH10Q9P2E7 1040 aa13.51□□□□□ -0.25
CDRT1-202ENST00000354433 PRKAG2Q9UGJ0 569 aa13.51□□□□□ -0.25
CDRT1-202ENST00000354433 NEDD4P46934 1319 aa13.51□□□□□ -0.25
CDRT1-202ENST00000354433 ALPK3Q96L96 1907 aa13.51□□□□□ -0.25
CDRT1-202ENST00000354433 PCP11498 1178 aaKnown RBP13.5□□□□□ -0.25
CDRT1-202ENST00000354433 TAL1P17542 331 aaPredicted RBP13.5□□□□□ -0.25
CDRT1-202ENST00000354433 SNAP25P60880 206 aa13.5□□□□□ -0.25
CDRT1-202ENST00000354433 RNF180Q86T96 592 aa13.5□□□□□ -0.25
CDRT1-202ENST00000354433 MSL3Q8N5Y2 521 aaKnown RBP13.5□□□□□ -0.25
CDRT1-202ENST00000354433 LENG1Q96BZ8 264 aaPredicted RBP13.5□□□□□ -0.25
CDRT1-202ENST00000354433 TRERF1Q96PN7 1200 aa13.5□□□□□ -0.25
CDRT1-202ENST00000354433 TMEM47Q9BQJ4 181 aa13.5□□□□□ -0.25
CDRT1-202ENST00000354433 CCPG1Q9ULG6 757 aa13.5□□□□□ -0.25
CDRT1-202ENST00000354433 PRR12Q9ULL5 1215 aa13.5□□□□□ -0.25
CDRT1-202ENST00000354433 ATP11BQ9Y2G3 1177 aa13.5□□□□□ -0.25
CDRT1-202ENST00000354433 SYNGAP1Q96PV0 1343 aa13.5□□□□□ -0.25
CDRT1-202ENST00000354433 POTEB2H3BUK9 544 aa13.49□□□□□ -0.25
CDRT1-202ENST00000354433 PGK1P00558 417 aa13.49□□□□□ -0.25
CDRT1-202ENST00000354433 MAGEA10P43363 369 aaPredicted RBP13.49□□□□□ -0.25
CDRT1-202ENST00000354433 RTP1P59025 263 aa13.49□□□□□ -0.25
CDRT1-202ENST00000354433 LRRC41Q15345 812 aa13.49□□□□□ -0.25
CDRT1-202ENST00000354433 IMMTQ16891 758 aaKnown RBP13.49□□□□□ -0.25
CDRT1-202ENST00000354433 FERMT2Q96AC1 680 aa13.49□□□□□ -0.25
CDRT1-202ENST00000354433 ZKSCAN3Q9BRR0 538 aa13.49□□□□□ -0.25
CDRT1-202ENST00000354433 ZNF536O15090 1300 aa13.49□□□□□ -0.25
CDRT1-202ENST00000354433 LAMA3Q16787 3333 aa13.49□□□□□ -0.25
CDRT1-202ENST00000354433 DNAJC25-GNG10A0A024R161 153 aa13.49□□□□□ -0.25
CDRT1-202ENST00000354433 A0A1W2PPC1 479 aa13.49□□□□□ -0.25
CDRT1-202ENST00000354433 PLA2G6O60733 806 aa13.49□□□□□ -0.25
CDRT1-202ENST00000354433 ZNF865P0CJ78 1059 aaPredicted RBP13.49□□□□□ -0.25
CDRT1-202ENST00000354433 SLC16A2P36021 539 aa13.49□□□□□ -0.25
CDRT1-202ENST00000354433 ADCYAP1R1P41586 468 aa13.49□□□□□ -0.25
CDRT1-202ENST00000354433 MDM2Q00987 491 aaPredicted RBP13.49□□□□□ -0.25
CDRT1-202ENST00000354433 KIAA1211Q6ZU35 1233 aa13.49□□□□□ -0.25
CDRT1-202ENST00000354433 IQCA1Q86XH1 822 aa13.49□□□□□ -0.25
CDRT1-202ENST00000354433 PRO3102Q9H379 93 aa13.49□□□□□ -0.25
CDRT1-202ENST00000354433 GPCPD1Q9NPB8 672 aa13.49□□□□□ -0.25
CDRT1-202ENST00000354433 ANO2Q9NQ90 1003 aa13.49□□□□□ -0.25
CDRT1-202ENST00000354433 A1CFQ9NQ94 594 aaKnown RBP13.49□□□□□ -0.25
CDRT1-202ENST00000354433 PRDM5Q9NQX1 630 aaPredicted RBP13.49□□□□□ -0.25
CDRT1-202ENST00000354433 TCP11L1Q9NUJ3 509 aa13.49□□□□□ -0.25
CDRT1-202ENST00000354433 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.49□□□□□ -0.25
CDRT1-202ENST00000354433 FAM184BQ9ULE4 1060 aa13.49□□□□□ -0.25
CDRT1-202ENST00000354433 KDM4AO75164 1064 aa13.48□□□□□ -0.25
CDRT1-202ENST00000354433 TKFCQ3LXA3 575 aa13.48□□□□□ -0.25
CDRT1-202ENST00000354433 SYDE2Q5VT97 1194 aa13.48□□□□□ -0.25
CDRT1-202ENST00000354433 TTBK2Q6IQ55 1244 aa13.48□□□□□ -0.25
CDRT1-202ENST00000354433 NSMFQ6X4W1 530 aa13.48□□□□□ -0.25
CDRT1-202ENST00000354433 ARMCX2Q7L311 632 aa13.48□□□□□ -0.25
CDRT1-202ENST00000354433 ZNF467Q7Z7K2 595 aaPredicted RBP13.48□□□□□ -0.25
CDRT1-202ENST00000354433 GDF15Q99988 308 aa13.48□□□□□ -0.25
CDRT1-202ENST00000354433 LBHD1Q9BQE6 289 aaPredicted RBP13.48□□□□□ -0.25
CDRT1-202ENST00000354433 DSCC1Q9BVC3 393 aa13.48□□□□□ -0.25
CDRT1-202ENST00000354433 UBE2OQ9C0C9 1292 aaKnown RBP13.48□□□□□ -0.25
CDRT1-202ENST00000354433 B4E1Z4 1266 aa13.47□□□□□ -0.25
CDRT1-202ENST00000354433 SNAI1O95863 264 aaPredicted RBP13.47□□□□□ -0.25
CDRT1-202ENST00000354433 ICAM1P05362 532 aa13.47□□□□□ -0.25
CDRT1-202ENST00000354433 PDHBP11177 359 aa13.47□□□□□ -0.25
CDRT1-202ENST00000354433 NOVP48745 357 aa13.47□□□□□ -0.25
CDRT1-202ENST00000354433 ACVR2BQ13705 512 aa13.47□□□□□ -0.25
CDRT1-202ENST00000354433 TRIM60Q495X7 471 aa13.47□□□□□ -0.25
CDRT1-202ENST00000354433 MAMDC4Q6UXC1 1216 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms