RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 CCDC122Q5T0U0 273 aa15.25■□□□□ 0.03
SMC6-201ENST00000351948 FAM83BQ5T0W9 1011 aa15.25■□□□□ 0.03
SMC6-201ENST00000351948 CCDC50Q8IVM0 306 aa15.25■□□□□ 0.03
SMC6-201ENST00000351948 TEKT3Q9BXF9 490 aa15.25■□□□□ 0.03
SMC6-201ENST00000351948 H0YHG0 523 aa15.25■□□□□ 0.03
SMC6-201ENST00000351948 CSF1RP07333 972 aa15.25■□□□□ 0.03
SMC6-201ENST00000351948 PLCB3Q01970 1234 aa15.25■□□□□ 0.03
SMC6-201ENST00000351948 SLC39A14Q15043 492 aa15.25■□□□□ 0.03
SMC6-201ENST00000351948 HOOK3Q86VS8 718 aa15.25■□□□□ 0.03
SMC6-201ENST00000351948 RNASE9P60153 205 aaKnown RBP15.25■□□□□ 0.03
SMC6-201ENST00000351948 KIAA0753Q2KHM9 967 aa15.25■□□□□ 0.03
SMC6-201ENST00000351948 PRAMEF18Q5VWM3 479 aa15.25■□□□□ 0.03
SMC6-201ENST00000351948 FOXP1Q9H334 677 aaPredicted RBP15.25■□□□□ 0.03
SMC6-201ENST00000351948 ZNF75DP51815 510 aa15.25■□□□□ 0.03
SMC6-201ENST00000351948 DEPTORQ8TB45 409 aa15.25■□□□□ 0.03
SMC6-201ENST00000351948 PLA2G12BQ9BX93 195 aa15.25■□□□□ 0.03
SMC6-201ENST00000351948 NAA15Q9BXJ9 866 aaKnown RBP15.25■□□□□ 0.03
SMC6-201ENST00000351948 GBP3Q9H0R5 595 aa15.25■□□□□ 0.03
SMC6-201ENST00000351948 VWDEQ8N2E2 1590 aa15.24■□□□□ 0.03
SMC6-201ENST00000351948 POLR3GO15318 223 aaPredicted RBP15.24■□□□□ 0.03
SMC6-201ENST00000351948 ARHGAP44Q17R89 818 aa15.24■□□□□ 0.03
SMC6-201ENST00000351948 LEKR1Q6ZMV7 388 aa15.24■□□□□ 0.03
SMC6-201ENST00000351948 NSUN4Q96CB9 384 aaKnown RBP15.24■□□□□ 0.03
SMC6-201ENST00000351948 ZNF577Q9BSK1 485 aa15.24■□□□□ 0.03
SMC6-201ENST00000351948 XPO4Q9C0E2 1151 aaKnown RBP15.24■□□□□ 0.03
SMC6-201ENST00000351948 EXOC7Q9UPT5 735 aa15.24■□□□□ 0.03
SMC6-201ENST00000351948 PCDHA5Q9Y5H7 936 aa15.24■□□□□ 0.03
SMC6-201ENST00000351948 USP42Q9H9J4 1324 aaKnown RBP15.24■□□□□ 0.03
SMC6-201ENST00000351948 GALNT17Q6IS24 598 aa15.24■□□□□ 0.03
SMC6-201ENST00000351948 TMEM179Q6ZVK1 233 aa15.24■□□□□ 0.03
SMC6-201ENST00000351948 TNNI1P19237 187 aa15.24■□□□□ 0.03
SMC6-201ENST00000351948 GBP2P32456 591 aaPredicted RBP15.24■□□□□ 0.03
SMC6-201ENST00000351948 USP14P54578 494 aa15.24■□□□□ 0.03
SMC6-201ENST00000351948 SMC1AQ14683 1233 aaKnown RBP15.24■□□□□ 0.03
SMC6-201ENST00000351948 Q3C1V9 767 aa15.24■□□□□ 0.03
SMC6-201ENST00000351948 ARMC9Q7Z3E5 817 aa15.24■□□□□ 0.03
SMC6-201ENST00000351948 GJA10Q969M2 543 aa15.24■□□□□ 0.03
SMC6-201ENST00000351948 SLC10A4Q96EP9 437 aa15.24■□□□□ 0.03
SMC6-201ENST00000351948 PXDNQ92626 1479 aa15.24■□□□□ 0.03
SMC6-201ENST00000351948 ASNSP08243 561 aa15.24■□□□□ 0.03
SMC6-201ENST00000351948 ZNF445P59923 1031 aa15.24■□□□□ 0.03
SMC6-201ENST00000351948 SLFN12Q8IYM2 578 aa15.24■□□□□ 0.03
SMC6-201ENST00000351948 SPON1Q9HCB6 807 aa15.24■□□□□ 0.03
SMC6-201ENST00000351948 PANK4Q9NVE7 773 aa15.24■□□□□ 0.03
SMC6-201ENST00000351948 SETQ01105 290 aaPredicted RBP15.23■□□□□ 0.03
SMC6-201ENST00000351948 SPP2Q13103 211 aa15.23■□□□□ 0.03
SMC6-201ENST00000351948 OTUD6AQ7L8S5 288 aa15.23■□□□□ 0.03
SMC6-201ENST00000351948 K7ENM7 598 aa15.23■□□□□ 0.03
SMC6-201ENST00000351948 DGKHQ86XP1 1220 aa15.23■□□□□ 0.03
SMC6-201ENST00000351948 KDM3AQ9Y4C1 1321 aa15.23■□□□□ 0.03
SMC6-201ENST00000351948 CTAGE9A4FU28 777 aa15.23■□□□□ 0.03
SMC6-201ENST00000351948 IREB2P48200 963 aaKnown RBP15.23■□□□□ 0.03
SMC6-201ENST00000351948 LRRC41Q15345 812 aa15.23■□□□□ 0.03
SMC6-201ENST00000351948 STOX1Q6ZVD7 989 aa15.23■□□□□ 0.03
SMC6-201ENST00000351948 FAM178BQ8IXR5 827 aa15.23■□□□□ 0.03
SMC6-201ENST00000351948 ATP6V0A2Q9Y487 856 aa15.23■□□□□ 0.03
SMC6-201ENST00000351948 CEP83Q9Y592 693 aa15.23■□□□□ 0.03
SMC6-201ENST00000351948 LRRIQ4A6NIV6 560 aa15.23■□□□□ 0.03
SMC6-201ENST00000351948 PRPF3O43395 683 aaKnown RBP15.23■□□□□ 0.03
SMC6-201ENST00000351948 FOSP01100 380 aaPredicted RBP15.23■□□□□ 0.03
SMC6-201ENST00000351948 ACTN2P35609 894 aa15.23■□□□□ 0.03
SMC6-201ENST00000351948 PPP1R2P41236 205 aa15.23■□□□□ 0.03
SMC6-201ENST00000351948 ADKP55263 362 aaKnown RBP15.23■□□□□ 0.03
SMC6-201ENST00000351948 COL23A1Q86Y22 540 aaPredicted RBP15.23■□□□□ 0.03
SMC6-201ENST00000351948 MYOCDQ8IZQ8 938 aa15.23■□□□□ 0.03
SMC6-201ENST00000351948 CCDC127Q96BQ5 260 aa15.23■□□□□ 0.03
SMC6-201ENST00000351948 UTYO14607 1347 aa15.23■□□□□ 0.03
SMC6-201ENST00000351948 USP17L15C9J2P7 530 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 USP17L13C9JLJ4 530 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 USP17L11C9JVI0 530 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 USP17L18D6R9N7 530 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 USP17L22D6RA61 530 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 USP17L17D6RBQ6 530 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 USP17L19D6RCP7 530 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 USP17L20D6RJB6 530 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 CDC27P30260 824 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 USP17L24Q0WX57 530 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 SLC15A2Q16348 729 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 MAP9Q49MG5 647 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 USP17L6PQ6QN14 398 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 DYDC1Q8WWB3 177 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 FANCLQ9NW38 375 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 PPLO60437 1756 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 CTAGE15A4D2H0 777 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 CTAGE8P0CG41 777 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 AKR1B1P15121 316 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 DPEP1P16444 411 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 CTAGE6Q86UF2 777 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 CTAGE4Q8IX94 777 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 EPSTI1Q96J88 318 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 USP17L10C9JJH3 530 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 CD19P15391 556 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 RFX5P48382 616 aaPredicted RBP15.22■□□□□ 0.03
SMC6-201ENST00000351948 PSMB7Q99436 277 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 LINC00301Q8NCQ3 95 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 DAGLAQ9Y4D2 1042 aa15.22■□□□□ 0.03
SMC6-201ENST00000351948 POTEB2H3BUK9 544 aa15.21■□□□□ 0.03
SMC6-201ENST00000351948 TNFAIP3P21580 790 aa15.21■□□□□ 0.03
SMC6-201ENST00000351948 TMTC3Q6ZXV5 915 aa15.21■□□□□ 0.03
SMC6-201ENST00000351948 MB21D2Q8IYB1 491 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms