RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ALS2CR12Q96Q35 445 aa14.69□□□□□ -0.06
IFT88-202ENST00000351808 CHCHD3Q9NX63 227 aaKnown RBP14.69□□□□□ -0.06
IFT88-202ENST00000351808 RGL1Q9NZL6 768 aa14.69□□□□□ -0.06
IFT88-202ENST00000351808 CAPN6Q9Y6Q1 641 aa14.69□□□□□ -0.06
IFT88-202ENST00000351808 FPGT-TNNI3KV9GXZ4 949 aa14.69□□□□□ -0.06
IFT88-202ENST00000351808 KCNQ3O43525 872 aa14.69□□□□□ -0.06
IFT88-202ENST00000351808 SPICE1Q8N0Z3 855 aa14.69□□□□□ -0.06
IFT88-202ENST00000351808 FBXL16Q8N461 479 aa14.69□□□□□ -0.06
IFT88-202ENST00000351808 OSBPL1AQ9BXW6 950 aa14.69□□□□□ -0.06
IFT88-202ENST00000351808 PIDD1Q9HB75 910 aa14.69□□□□□ -0.06
IFT88-202ENST00000351808 CNOT8Q9UFF9 292 aaKnown RBP14.69□□□□□ -0.06
IFT88-202ENST00000351808 SIGLEC1Q9BZZ2 1709 aa14.68□□□□□ -0.06
IFT88-202ENST00000351808 DPPA5A6NC42 116 aa14.68□□□□□ -0.06
IFT88-202ENST00000351808 LIN7AO14910 233 aaPredicted RBP14.68□□□□□ -0.06
IFT88-202ENST00000351808 CLSTN1O94985 981 aa14.68□□□□□ -0.06
IFT88-202ENST00000351808 HEXIM1O94992 359 aaKnown RBP14.68□□□□□ -0.06
IFT88-202ENST00000351808 KIF5AQ12840 1032 aa14.68□□□□□ -0.06
IFT88-202ENST00000351808 ZNF662Q6ZS27 426 aa14.68□□□□□ -0.06
IFT88-202ENST00000351808 DNAJC7Q99615 494 aa14.68□□□□□ -0.06
IFT88-202ENST00000351808 MYO5BQ9ULV0 1848 aa14.68□□□□□ -0.06
IFT88-202ENST00000351808 KCNJ18B7U540 433 aa14.68□□□□□ -0.06
IFT88-202ENST00000351808 F8W031 263 aaPredicted RBP14.68□□□□□ -0.06
IFT88-202ENST00000351808 FAM163BP0C2L3 166 aa14.68□□□□□ -0.06
IFT88-202ENST00000351808 CYLC1P35663 651 aaPredicted RBP14.68□□□□□ -0.06
IFT88-202ENST00000351808 TOB1P50616 345 aaPredicted RBP14.68□□□□□ -0.06
IFT88-202ENST00000351808 EIF4A1P60842 406 aaKnown RBP14.68□□□□□ -0.06
IFT88-202ENST00000351808 MAP3K12Q12852 859 aa14.68□□□□□ -0.06
IFT88-202ENST00000351808 KCNJ12Q14500 433 aa14.68□□□□□ -0.06
IFT88-202ENST00000351808 SPATA21Q7Z572 469 aa14.68□□□□□ -0.06
IFT88-202ENST00000351808 C1orf131Q8NDD1 294 aaKnown RBP14.68□□□□□ -0.06
IFT88-202ENST00000351808 PRCCQ92733 491 aaPredicted RBP14.68□□□□□ -0.06
IFT88-202ENST00000351808 STAMQ92783 540 aa14.68□□□□□ -0.06
IFT88-202ENST00000351808 CNKSR1Q969H4 720 aa14.68□□□□□ -0.06
IFT88-202ENST00000351808 PURBQ96QR8 312 aaKnown RBP14.68□□□□□ -0.06
IFT88-202ENST00000351808 TAF1DQ9H5J8 278 aaPredicted RBP14.68□□□□□ -0.06
IFT88-202ENST00000351808 MLXIPQ9HAP2 919 aa14.68□□□□□ -0.06
IFT88-202ENST00000351808 GDF3Q9NR23 364 aa14.68□□□□□ -0.06
IFT88-202ENST00000351808 HELLSQ9NRZ9 838 aa14.68□□□□□ -0.06
IFT88-202ENST00000351808 DBF4Q9UBU7 674 aaPredicted RBP14.68□□□□□ -0.06
IFT88-202ENST00000351808 WDR17Q8IZU2 1322 aa14.68□□□□□ -0.06
IFT88-202ENST00000351808 RGPD1P0DJD0 1748 aa14.68□□□□□ -0.06
IFT88-202ENST00000351808 GCOM1H8Y6P7 765 aaPredicted RBP14.67□□□□□ -0.06
IFT88-202ENST00000351808 MAP3K13O43283 966 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 MYZAPP0CAP1 466 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 PAFAH1B1P43034 410 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 ANTXR2P58335 489 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 TCP11X2Q5H9J9 407 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 CEP170BQ9Y4F5 1589 aaPredicted RBP14.67□□□□□ -0.06
IFT88-202ENST00000351808 UBN2Q6ZU65 1347 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 SH2B2O14492 632 aaPredicted RBP14.67□□□□□ -0.06
IFT88-202ENST00000351808 NCK2O43639 380 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 RNF8O76064 485 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 DRD4P21917 467 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 GCLCP48506 637 aaPredicted RBP14.67□□□□□ -0.06
IFT88-202ENST00000351808 FAM133BQ5BKY9 247 aaKnown RBP14.67□□□□□ -0.06
IFT88-202ENST00000351808 CHADLQ6NUI6 762 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 MREGQ8N565 214 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 MS4A14Q96JA4 679 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 CSRNP2Q9H175 543 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 NHEJ1Q9H9Q4 299 aaPredicted RBP14.67□□□□□ -0.06
IFT88-202ENST00000351808 LRWD1Q9UFC0 647 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 PEAK1Q9H792 1746 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 MAP3K15Q6ZN16 1313 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 A0A087X0B3 334 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 BTBD18B2RXH4 712 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 H7C1W4 665 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 EVI5O60447 810 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 MOCS3O95396 460 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 TRIM29Q14134 588 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 PROSER3Q2NL68 480 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 ZMYM1Q5SVZ6 1142 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 HHATQ5VTY9 493 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 KRT26Q7Z3Y9 468 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 ERICH1Q86X53 443 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 SENP2Q9HC62 589 aa14.67□□□□□ -0.06
IFT88-202ENST00000351808 KIDINS220Q9ULH0 1771 aa14.66□□□□□ -0.06
IFT88-202ENST00000351808 PPFIA2O75334 1257 aa14.66□□□□□ -0.06
IFT88-202ENST00000351808 TACC1O75410 805 aa14.66□□□□□ -0.06
IFT88-202ENST00000351808 KCNJ2P63252 427 aa14.66□□□□□ -0.06
IFT88-202ENST00000351808 ZNF268Q14587 947 aaPredicted RBP14.66□□□□□ -0.06
IFT88-202ENST00000351808 CCDC96Q2M329 555 aa14.66□□□□□ -0.06
IFT88-202ENST00000351808 ANKRD20A2Q5SQ80 823 aa14.66□□□□□ -0.06
IFT88-202ENST00000351808 PPP1R15BQ5SWA1 713 aa14.66□□□□□ -0.06
IFT88-202ENST00000351808 C1QTNF12Q5T7M4 302 aa14.66□□□□□ -0.06
IFT88-202ENST00000351808 ANKRD20A1Q5TYW2 823 aa14.66□□□□□ -0.06
IFT88-202ENST00000351808 ANKRD20A3Q5VUR7 823 aa14.66□□□□□ -0.06
IFT88-202ENST00000351808 CASKIN2Q8WXE0 1202 aa14.66□□□□□ -0.06
IFT88-202ENST00000351808 AGPAT5Q9NUQ2 364 aa14.66□□□□□ -0.06
IFT88-202ENST00000351808 MAST3O60307 1309 aa14.66□□□□□ -0.06
IFT88-202ENST00000351808 KSR2Q6VAB6 950 aa14.66□□□□□ -0.06
IFT88-202ENST00000351808 ARMC9Q7Z3E5 817 aa14.66□□□□□ -0.06
IFT88-202ENST00000351808 ARHGAP22Q7Z5H3 698 aa14.66□□□□□ -0.06
IFT88-202ENST00000351808 CCDC197Q8NCU1 140 aa14.66□□□□□ -0.06
IFT88-202ENST00000351808 PAGE5Q96GU1 130 aa14.66□□□□□ -0.06
IFT88-202ENST00000351808 ARHGEF10LQ9HCE6 1279 aa14.66□□□□□ -0.06
IFT88-202ENST00000351808 SLC12A4Q9UP95 1085 aa14.66□□□□□ -0.06
IFT88-202ENST00000351808 HYOU1Q9Y4L1 999 aa14.66□□□□□ -0.06
IFT88-202ENST00000351808 PCDHB6Q9Y5E3 794 aa14.66□□□□□ -0.06
IFT88-202ENST00000351808 MST1RQ04912 1400 aa14.65□□□□□ -0.06
IFT88-202ENST00000351808 ARAP3Q8WWN8 1544 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms