RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 ADGRF4Q8IZF3 695 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 TRIML1Q8N9V2 468 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 GMCL1P1Q8NEA9 526 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 FAM151AQ8WW52 585 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 SYMPKQ92797 1274 aaKnown RBP7.88□□□□□ -1.15
TRIM55-203ENST00000350034 MRFAP1L1Q96HT8 127 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 EPSTI1Q96J88 318 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 SGIP1Q9BQI5 828 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 PYM1Q9BRP8 204 aaKnown RBP7.88□□□□□ -1.15
TRIM55-203ENST00000350034 GPCPD1Q9NPB8 672 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 SEC63Q9UGP8 760 aaKnown RBP7.88□□□□□ -1.15
TRIM55-203ENST00000350034 PGAP2Q9UHJ9 254 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 HERC5Q9UII4 1024 aaKnown RBP7.88□□□□□ -1.15
TRIM55-203ENST00000350034 HOOK1Q9UJC3 728 aaKnown RBP7.88□□□□□ -1.15
TRIM55-203ENST00000350034 MAN1B1Q9UKM7 699 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 HDAC9Q9UKV0 1011 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 MTMR7Q9Y216 660 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 CNTNAP1P78357 1384 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 LTBP3Q9NS15 1303 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 FAM196BA6NMK8 535 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 SMTNL1A8MU46 457 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 BECN2A8MW95 431 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 GOLGA6L19H0YKK7 550 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 BIN1O00499 593 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 MPHOSPH10O00566 681 aaKnown RBP7.87□□□□□ -1.15
TRIM55-203ENST00000350034 EDIL3O43854 480 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 TBC1D12O60347 775 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 PRR29P0C7W0 189 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 CLK2P49760 499 aaKnown RBP7.87□□□□□ -1.15
TRIM55-203ENST00000350034 MAP3K10Q02779 954 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 CXCL9Q07325 125 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 MORC3Q14149 939 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 NONOQ15233 471 aaKnown RBP eCLIP7.87□□□□□ -1.15
TRIM55-203ENST00000350034 DLGAP5Q15398 846 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 INF2Q27J81 1249 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 ABCB5Q2M3G0 1257 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 SHROOM1Q2M3G4 852 aaPredicted RBP7.87□□□□□ -1.15
TRIM55-203ENST00000350034 DALRD3Q5D0E6 543 aaKnown RBP7.87□□□□□ -1.15
TRIM55-203ENST00000350034 CT47A1Q5JQC4 288 aaPredicted RBP7.87□□□□□ -1.15
TRIM55-203ENST00000350034 SLFN13Q68D06 897 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 PDXDC2PQ6P474 469 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 HOMER1Q86YM7 354 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 ZSCAN29Q8IWY8 852 aaPredicted RBP7.87□□□□□ -1.15
TRIM55-203ENST00000350034 AOPEPQ8N6M6 819 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 PAGE5Q96GU1 130 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 GMCL1Q96IK5 515 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 CCSER1Q9C0I3 900 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 HSD3B7Q9H2F3 369 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 TMEM60Q9H2L4 133 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 VAT1LQ9HCJ6 419 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 RIC8AQ9NPQ8 531 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 TMOD2Q9NZR1 351 aa7.87□□□□□ -1.15
TRIM55-203ENST00000350034 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.87□□□□□ -1.15
TRIM55-203ENST00000350034 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.86□□□□□ -1.15
TRIM55-203ENST00000350034 VWA3AA6NCI4 1184 aa7.86□□□□□ -1.15
TRIM55-203ENST00000350034 USP17L10C9JJH3 530 aa7.86□□□□□ -1.15
TRIM55-203ENST00000350034 NFKBIEO00221 500 aa7.86□□□□□ -1.15
TRIM55-203ENST00000350034 DLL1O00548 723 aa7.86□□□□□ -1.15
TRIM55-203ENST00000350034 ZBTB5O15062 677 aa7.86□□□□□ -1.15
TRIM55-203ENST00000350034 MYO1BO43795 1136 aa7.86□□□□□ -1.15
TRIM55-203ENST00000350034 ZBTB7AO95365 584 aa7.86□□□□□ -1.15
TRIM55-203ENST00000350034 PTMAP06454 111 aaKnown RBP7.86□□□□□ -1.15
TRIM55-203ENST00000350034 POLD1P28340 1107 aa7.86□□□□□ -1.15
TRIM55-203ENST00000350034 ADCY7P51828 1080 aa7.86□□□□□ -1.15
TRIM55-203ENST00000350034 ZNF280AP59817 542 aaPredicted RBP7.86□□□□□ -1.15
TRIM55-203ENST00000350034 PLCB2Q00722 1185 aa7.86□□□□□ -1.15
TRIM55-203ENST00000350034 ICA1Q05084 483 aa7.86□□□□□ -1.15
TRIM55-203ENST00000350034 DPYDQ12882 1025 aa7.86□□□□□ -1.15
TRIM55-203ENST00000350034 ZRSR1Q15695 479 aaKnown RBP7.86□□□□□ -1.15
TRIM55-203ENST00000350034 RBM26Q5T8P6 1007 aaKnown RBP7.86□□□□□ -1.15
TRIM55-203ENST00000350034 BTNL9Q6UXG8 535 aa7.86□□□□□ -1.15
TRIM55-203ENST00000350034 NEK8Q86SG6 692 aa7.86□□□□□ -1.15
TRIM55-203ENST00000350034 FAM83AQ86UY5 434 aa7.86□□□□□ -1.15
TRIM55-203ENST00000350034 REXO1Q8N1G1 1221 aaKnown RBP7.86□□□□□ -1.15
TRIM55-203ENST00000350034 OGFOD1Q8N543 542 aa7.86□□□□□ -1.15
TRIM55-203ENST00000350034 PDILTQ8N807 584 aa7.86□□□□□ -1.15
TRIM55-203ENST00000350034 IQUBQ8NA54 791 aa7.86□□□□□ -1.15
TRIM55-203ENST00000350034 MLKLQ8NB16 471 aa7.86□□□□□ -1.15
TRIM55-203ENST00000350034 SMARCE1Q969G3 411 aa7.86□□□□□ -1.15
TRIM55-203ENST00000350034 COA7Q96BR5 231 aa7.86□□□□□ -1.15
TRIM55-203ENST00000350034 DHX58Q96C10 678 aa7.86□□□□□ -1.15
TRIM55-203ENST00000350034 CCDC34Q96HJ3 373 aa7.86□□□□□ -1.15
TRIM55-203ENST00000350034 TRIM5Q9C035 493 aa7.86□□□□□ -1.15
TRIM55-203ENST00000350034 TAOK3Q9H2K8 898 aa7.86□□□□□ -1.15
TRIM55-203ENST00000350034 RTN4Q9NQC3 1192 aaKnown RBP7.86□□□□□ -1.15
TRIM55-203ENST00000350034 ATF5Q9Y2D1 282 aaPredicted RBP7.86□□□□□ -1.15
TRIM55-203ENST00000350034 ZBTB12Q9Y330 459 aaPredicted RBP7.86□□□□□ -1.15
TRIM55-203ENST00000350034 CD2APQ9Y5K6 639 aa7.86□□□□□ -1.15
TRIM55-203ENST00000350034 PDE4DIPQ5VU43 2346 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 CLRN2A0PK11 232 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 GOLGA6L6A8MZA4 724 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 TCP10L2B9ZVM9 353 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 F5H6K3 240 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 KIF3CO14782 793 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 GTPBP6O43824 516 aaPredicted RBP7.85□□□□□ -1.15
TRIM55-203ENST00000350034 SMC2O95347 1197 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 NDUFB10O96000 172 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 GH2P01242 217 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 OR52Z1P0C646 297 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 MSNP26038 577 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms