RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 RNF26Q9BY78 433 aaPredicted RBP17.02■□□□□ 0.32
PTPRO-202ENST00000348962 MYO1AQ9UBC5 1043 aa17.02■□□□□ 0.32
PTPRO-202ENST00000348962 ARHGAP6O43182 974 aa17.02■□□□□ 0.31
PTPRO-202ENST00000348962 USP17L8P0C7I0 530 aa17.02■□□□□ 0.31
PTPRO-202ENST00000348962 LONP1P36776 959 aaKnown RBP17.02■□□□□ 0.31
PTPRO-202ENST00000348962 IRX5P78411 483 aaPredicted RBP17.02■□□□□ 0.31
PTPRO-202ENST00000348962 CYP4A11Q02928 519 aa17.02■□□□□ 0.31
PTPRO-202ENST00000348962 SETDB1Q15047 1291 aa17.02■□□□□ 0.31
PTPRO-202ENST00000348962 RPS6KA1Q15418 735 aa17.02■□□□□ 0.31
PTPRO-202ENST00000348962 GCFC2P16383 781 aaKnown RBP17.02■□□□□ 0.31
PTPRO-202ENST00000348962 POLR2BP30876 1174 aaKnown RBP17.02■□□□□ 0.31
PTPRO-202ENST00000348962 STAT2P52630 851 aa17.02■□□□□ 0.31
PTPRO-202ENST00000348962 KIF11P52732 1056 aa17.02■□□□□ 0.31
PTPRO-202ENST00000348962 GBP6Q6ZN66 633 aa17.02■□□□□ 0.31
PTPRO-202ENST00000348962 PLEKHF1Q96S99 279 aa17.02■□□□□ 0.31
PTPRO-202ENST00000348962 ZNF277Q9NRM2 450 aaPredicted RBP17.02■□□□□ 0.31
PTPRO-202ENST00000348962 TRAPPC10P48553 1259 aa17.01■□□□□ 0.31
PTPRO-202ENST00000348962 PDZD4Q76G19 769 aaPredicted RBP17.01■□□□□ 0.31
PTPRO-202ENST00000348962 LAD1O00515 517 aa17.01■□□□□ 0.31
PTPRO-202ENST00000348962 C21orf2O43822 256 aa17.01■□□□□ 0.31
PTPRO-202ENST00000348962 RNASE9P60153 205 aaKnown RBP17.01■□□□□ 0.31
PTPRO-202ENST00000348962 CROCCP2Q86T23 111 aa17.01■□□□□ 0.31
PTPRO-202ENST00000348962 NACC1Q96RE7 527 aa17.01■□□□□ 0.31
PTPRO-202ENST00000348962 ZNF577Q9BSK1 485 aa17.01■□□□□ 0.31
PTPRO-202ENST00000348962 ZHX1Q9UKY1 873 aaPredicted RBP17.01■□□□□ 0.31
PTPRO-202ENST00000348962 TLR3O15455 904 aaKnown RBP17.01■□□□□ 0.31
PTPRO-202ENST00000348962 PFKFB1P16118 471 aa17.01■□□□□ 0.31
PTPRO-202ENST00000348962 NT5C2P49902 561 aa17.01■□□□□ 0.31
PTPRO-202ENST00000348962 DYNLL1P63167 89 aaKnown RBP17.01■□□□□ 0.31
PTPRO-202ENST00000348962 ODR4Q5SWX8 454 aa17.01■□□□□ 0.31
PTPRO-202ENST00000348962 FAM160B2Q86V87 743 aa17.01■□□□□ 0.31
PTPRO-202ENST00000348962 SESTD1Q86VW0 696 aa17.01■□□□□ 0.31
PTPRO-202ENST00000348962 CCDC110Q8TBZ0 833 aa17.01■□□□□ 0.31
PTPRO-202ENST00000348962 STAP2Q9UGK3 403 aa17.01■□□□□ 0.31
PTPRO-202ENST00000348962 DLATP10515 647 aaKnown RBP17.01■□□□□ 0.31
PTPRO-202ENST00000348962 ADD2P35612 726 aa17.01■□□□□ 0.31
PTPRO-202ENST00000348962 HADHQ16836 314 aaKnown RBP17.01■□□□□ 0.31
PTPRO-202ENST00000348962 AFAP1L2Q8N4X5 818 aa17.01■□□□□ 0.31
PTPRO-202ENST00000348962 C2orf69Q8N8R5 385 aa17.01■□□□□ 0.31
PTPRO-202ENST00000348962 CBX8Q9HC52 389 aa17.01■□□□□ 0.31
PTPRO-202ENST00000348962 SAMD15Q9P1V8 674 aa17.01■□□□□ 0.31
PTPRO-202ENST00000348962 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.01■□□□□ 0.31
PTPRO-202ENST00000348962 LRFN2Q9ULH4 789 aa17.01■□□□□ 0.31
PTPRO-202ENST00000348962 V9GYY5 206 aaPredicted RBP17.01■□□□□ 0.31
PTPRO-202ENST00000348962 ARAP3Q8WWN8 1544 aa17.01■□□□□ 0.31
PTPRO-202ENST00000348962 SRGAP1Q7Z6B7 1085 aa17■□□□□ 0.31
PTPRO-202ENST00000348962 CCDC127Q96BQ5 260 aa17■□□□□ 0.31
PTPRO-202ENST00000348962 MAGEF1Q9HAY2 307 aa17■□□□□ 0.31
PTPRO-202ENST00000348962 PFDN4Q9NQP4 134 aa17■□□□□ 0.31
PTPRO-202ENST00000348962 FAM184BQ9ULE4 1060 aa17■□□□□ 0.31
PTPRO-202ENST00000348962 AKT3Q9Y243 479 aa17■□□□□ 0.31
PTPRO-202ENST00000348962 KDM5CP41229 1560 aa17■□□□□ 0.31
PTPRO-202ENST00000348962 GTPBP6O43824 516 aaPredicted RBP17■□□□□ 0.31
PTPRO-202ENST00000348962 CASC4Q6P4E1 433 aa17■□□□□ 0.31
PTPRO-202ENST00000348962 TRMT44Q8IYL2 757 aaKnown RBP17■□□□□ 0.31
PTPRO-202ENST00000348962 SEPT9Q9UHD8 586 aaPredicted RBP17■□□□□ 0.31
PTPRO-202ENST00000348962 NARFQ9UHQ1 456 aa17■□□□□ 0.31
PTPRO-202ENST00000348962 OATP04181 439 aa17■□□□□ 0.31
PTPRO-202ENST00000348962 SUSD4Q5VX71 490 aa17■□□□□ 0.31
PTPRO-202ENST00000348962 KCTD1Q719H9 257 aa17■□□□□ 0.31
PTPRO-202ENST00000348962 TRIM50Q86XT4 487 aa17■□□□□ 0.31
PTPRO-202ENST00000348962 CCDC89Q8N998 374 aa17■□□□□ 0.31
PTPRO-202ENST00000348962 TRIML1Q8N9V2 468 aa17■□□□□ 0.31
PTPRO-202ENST00000348962 POMGNT1Q8WZA1 660 aa17■□□□□ 0.31
PTPRO-202ENST00000348962 MYO5CQ9NQX4 1742 aa17■□□□□ 0.31
PTPRO-202ENST00000348962 MYO3BQ8WXR4 1341 aa17■□□□□ 0.31
PTPRO-202ENST00000348962 ADCY9O60503 1353 aa17■□□□□ 0.31
PTPRO-202ENST00000348962 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17■□□□□ 0.31
PTPRO-202ENST00000348962 HNRNPDLO14979 420 aaKnown RBP17■□□□□ 0.31
PTPRO-202ENST00000348962 ASNSP08243 561 aa17■□□□□ 0.31
PTPRO-202ENST00000348962 PDIA3P30101 505 aaKnown RBP17■□□□□ 0.31
PTPRO-202ENST00000348962 PPP2R3AQ06190 1150 aa17■□□□□ 0.31
PTPRO-202ENST00000348962 PTGDRQ13258 359 aa17■□□□□ 0.31
PTPRO-202ENST00000348962 SEPT14Q6ZU15 432 aa17■□□□□ 0.31
PTPRO-202ENST00000348962 DAAM2Q86T65 1068 aa17■□□□□ 0.31
PTPRO-202ENST00000348962 CCDC105Q8IYK2 499 aa17■□□□□ 0.31
PTPRO-202ENST00000348962 MAP4K1Q92918 833 aa17■□□□□ 0.31
PTPRO-202ENST00000348962 LSM14BQ9BX40 385 aaKnown RBP17■□□□□ 0.31
PTPRO-202ENST00000348962 PPANQ9NQ55 473 aaKnown RBP17■□□□□ 0.31
PTPRO-202ENST00000348962 GOLGA6CA6NDK9 693 aa16.99■□□□□ 0.31
PTPRO-202ENST00000348962 GOLGA6BA6NDN3 693 aa16.99■□□□□ 0.31
PTPRO-202ENST00000348962 GOLGA6DP0CG33 693 aa16.99■□□□□ 0.31
PTPRO-202ENST00000348962 LACTBP83111 547 aaPredicted RBP16.99■□□□□ 0.31
PTPRO-202ENST00000348962 MIS18BP1Q6P0N0 1132 aa16.99■□□□□ 0.31
PTPRO-202ENST00000348962 GOLGA6AQ9NYA3 693 aa16.99■□□□□ 0.31
PTPRO-202ENST00000348962 ANKFY1Q9P2R3 1169 aa16.99■□□□□ 0.31
PTPRO-202ENST00000348962 INO80B-WBP1J3KQ70 363 aa16.99■□□□□ 0.31
PTPRO-202ENST00000348962 CMA1P23946 247 aa16.99■□□□□ 0.31
PTPRO-202ENST00000348962 PNOCQ13519 176 aa16.99■□□□□ 0.31
PTPRO-202ENST00000348962 SPATA24Q86W54 205 aa16.99■□□□□ 0.31
PTPRO-202ENST00000348962 USP28Q96RU2 1077 aa16.99■□□□□ 0.31
PTPRO-202ENST00000348962 INO80BQ9C086 356 aaPredicted RBP16.99■□□□□ 0.31
PTPRO-202ENST00000348962 PRAMEF22A3QJZ6 481 aa16.99■□□□□ 0.31
PTPRO-202ENST00000348962 SLC12A2P55011 1212 aa16.99■□□□□ 0.31
PTPRO-202ENST00000348962 IFT20Q8IY31 132 aa16.99■□□□□ 0.31
PTPRO-202ENST00000348962 FBXO18Q8NFZ0 1043 aa16.99■□□□□ 0.31
PTPRO-202ENST00000348962 CCDC51Q96ER9 411 aa16.99■□□□□ 0.31
PTPRO-202ENST00000348962 KIAA1468Q9P260 1216 aa16.99■□□□□ 0.31
PTPRO-202ENST00000348962 KDM5AP29375 1690 aaKnown RBP16.99■□□□□ 0.31
PTPRO-202ENST00000348962 SOS2Q07890 1332 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms