RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 TPX2Q9ULW0 747 aaKnown RBP17.08■□□□□ 0.32
LMNA-201ENST00000347559 A0A1B0GUA9 196 aa17.07■□□□□ 0.32
LMNA-201ENST00000347559 H7C1W4 665 aa17.07■□□□□ 0.32
LMNA-201ENST00000347559 GLI1P08151 1106 aa17.07■□□□□ 0.32
LMNA-201ENST00000347559 SNRPA1P09661 255 aaKnown RBP17.07■□□□□ 0.32
LMNA-201ENST00000347559 PMS1P54277 932 aaKnown RBP17.07■□□□□ 0.32
LMNA-201ENST00000347559 WLSQ5T9L3 541 aa17.07■□□□□ 0.32
LMNA-201ENST00000347559 FUKQ8N0W3 1084 aa17.07■□□□□ 0.32
LMNA-201ENST00000347559 CYFIP2Q96F07 1278 aa17.07■□□□□ 0.32
LMNA-201ENST00000347559 CWC25Q9NXE8 425 aaPredicted RBP17.07■□□□□ 0.32
LMNA-201ENST00000347559 NUTM2BA6NNL0 878 aaPredicted RBP17.07■□□□□ 0.32
LMNA-201ENST00000347559 NUTM2EB1AL46 878 aaPredicted RBP17.07■□□□□ 0.32
LMNA-201ENST00000347559 USO1O60763 962 aaKnown RBP17.07■□□□□ 0.32
LMNA-201ENST00000347559 FAM107AO95990 144 aa17.07■□□□□ 0.32
LMNA-201ENST00000347559 PDE6BP35913 854 aa17.07■□□□□ 0.32
LMNA-201ENST00000347559 CCDC57Q2TAC2 916 aa17.07■□□□□ 0.32
LMNA-201ENST00000347559 TYW1BQ6NUM6 668 aa17.07■□□□□ 0.32
LMNA-201ENST00000347559 FAM228AQ86W67 206 aa17.07■□□□□ 0.32
LMNA-201ENST00000347559 CRACR2BQ8N4Y2 399 aaPredicted RBP17.07■□□□□ 0.32
LMNA-201ENST00000347559 IFIH1Q9BYX4 1025 aaKnown RBP17.07■□□□□ 0.32
LMNA-201ENST00000347559 DNM1LO00429 736 aa17.07■□□□□ 0.32
LMNA-201ENST00000347559 TBC1D8BQ0IIM8 1120 aa17.07■□□□□ 0.32
LMNA-201ENST00000347559 PLBD2Q8NHP8 589 aa17.07■□□□□ 0.32
LMNA-201ENST00000347559 HEXIM1O94992 359 aaKnown RBP17.06■□□□□ 0.32
LMNA-201ENST00000347559 PTGDRQ13258 359 aa17.06■□□□□ 0.32
LMNA-201ENST00000347559 WTAPQ15007 396 aa17.06■□□□□ 0.32
LMNA-201ENST00000347559 LRP10Q7Z4F1 713 aa17.06■□□□□ 0.32
LMNA-201ENST00000347559 TICAM2Q86XR7 235 aa17.06■□□□□ 0.32
LMNA-201ENST00000347559 MTRQ99707 1265 aa17.06■□□□□ 0.32
LMNA-201ENST00000347559 NAPBQ9H115 298 aa17.06■□□□□ 0.32
LMNA-201ENST00000347559 SLC52A2Q9HAB3 445 aa17.06■□□□□ 0.32
LMNA-201ENST00000347559 ZNF532Q9HCE3 1301 aa17.06■□□□□ 0.32
LMNA-201ENST00000347559 H7C1D1 291 aa17.06■□□□□ 0.32
LMNA-201ENST00000347559 ZNF263O14978 683 aa17.06■□□□□ 0.32
LMNA-201ENST00000347559 RPN1P04843 607 aaKnown RBP17.06■□□□□ 0.32
LMNA-201ENST00000347559 ZNF658Q5TYW1 1059 aaPredicted RBP17.06■□□□□ 0.32
LMNA-201ENST00000347559 TTLL7Q6ZT98 887 aa17.06■□□□□ 0.32
LMNA-201ENST00000347559 IFT20Q8IY31 132 aa17.06■□□□□ 0.32
LMNA-201ENST00000347559 IQCKQ8N0W5 287 aa17.06■□□□□ 0.32
LMNA-201ENST00000347559 RASSF8Q8NHQ8 419 aa17.06■□□□□ 0.32
LMNA-201ENST00000347559 CAVIN3Q969G5 261 aa17.06■□□□□ 0.32
LMNA-201ENST00000347559 HYOU1Q9Y4L1 999 aa17.06■□□□□ 0.32
LMNA-201ENST00000347559 TCIRG1Q13488 830 aa17.05■□□□□ 0.32
LMNA-201ENST00000347559 ATP6V1G3Q96LB4 118 aa17.05■□□□□ 0.32
LMNA-201ENST00000347559 TRHP20396 242 aaPredicted RBP17.05■□□□□ 0.32
LMNA-201ENST00000347559 ADD2P35612 726 aa17.05■□□□□ 0.32
LMNA-201ENST00000347559 LIFRP42702 1097 aa17.05■□□□□ 0.32
LMNA-201ENST00000347559 MCAMP43121 646 aa17.05■□□□□ 0.32
LMNA-201ENST00000347559 BIRC2Q13490 618 aa17.05■□□□□ 0.32
LMNA-201ENST00000347559 CRYMQ14894 314 aa17.05■□□□□ 0.32
LMNA-201ENST00000347559 TRADDQ15628 312 aa17.05■□□□□ 0.32
LMNA-201ENST00000347559 KCTD19Q17RG1 926 aaPredicted RBP17.05■□□□□ 0.32
LMNA-201ENST00000347559 ODF2Q5BJF6 829 aa17.05■□□□□ 0.32
LMNA-201ENST00000347559 FMNL3Q8IVF7 1028 aa17.05■□□□□ 0.32
LMNA-201ENST00000347559 SGSM3Q96HU1 749 aa17.05■□□□□ 0.32
LMNA-201ENST00000347559 OSBPL7Q9BZF2 842 aa17.05■□□□□ 0.32
LMNA-201ENST00000347559 BAIAP2L1Q9UHR4 511 aa17.05■□□□□ 0.32
LMNA-201ENST00000347559 ERICH2A1L162 156 aa17.05■□□□□ 0.32
LMNA-201ENST00000347559 ANKRD18BA2A2Z9 1011 aa17.05■□□□□ 0.32
LMNA-201ENST00000347559 GOLGA6L10A6NI86 522 aa17.05■□□□□ 0.32
LMNA-201ENST00000347559 BUB1O43683 1085 aa17.05■□□□□ 0.32
LMNA-201ENST00000347559 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.05■□□□□ 0.32
LMNA-201ENST00000347559 PLIN2Q99541 437 aa17.05■□□□□ 0.32
LMNA-201ENST00000347559 RIPOR2Q9Y4F9 1068 aa17.05■□□□□ 0.32
LMNA-201ENST00000347559 MYH10P35580 1976 aa17.04■□□□□ 0.32
LMNA-201ENST00000347559 GTPBP6O43824 516 aaPredicted RBP17.04■□□□□ 0.32
LMNA-201ENST00000347559 TMOD1P28289 359 aa17.04■□□□□ 0.32
LMNA-201ENST00000347559 PLCB4Q15147 1175 aa17.04■□□□□ 0.32
LMNA-201ENST00000347559 MEA1Q16626 185 aa17.04■□□□□ 0.32
LMNA-201ENST00000347559 OR2W6PQ8NHA6 318 aa17.04■□□□□ 0.32
LMNA-201ENST00000347559 FERMT2Q96AC1 680 aa17.04■□□□□ 0.32
LMNA-201ENST00000347559 ALS2CR12Q96Q35 445 aa17.04■□□□□ 0.32
LMNA-201ENST00000347559 PLAAQ9Y263 795 aa17.04■□□□□ 0.32
LMNA-201ENST00000347559 ZNF330Q9Y3S2 320 aaPredicted RBP17.04■□□□□ 0.32
LMNA-201ENST00000347559 TNRQ92752 1358 aa17.04■□□□□ 0.32
LMNA-201ENST00000347559 TCP1P17987 556 aaKnown RBP17.04■□□□□ 0.32
LMNA-201ENST00000347559 PAK2Q13177 524 aa17.04■□□□□ 0.32
LMNA-201ENST00000347559 QPCTQ16769 361 aa17.04■□□□□ 0.32
LMNA-201ENST00000347559 CCDC170Q8IYT3 715 aa17.04■□□□□ 0.32
LMNA-201ENST00000347559 TUBGCP2Q9BSJ2 902 aa17.04■□□□□ 0.32
LMNA-201ENST00000347559 PHF8Q9UPP1 1060 aa17.04■□□□□ 0.32
LMNA-201ENST00000347559 AKR1B10O60218 316 aa17.03■□□□□ 0.32
LMNA-201ENST00000347559 MCM7P33993 719 aa17.03■□□□□ 0.32
LMNA-201ENST00000347559 KRT2P35908 639 aa17.03■□□□□ 0.32
LMNA-201ENST00000347559 DNM2P50570 870 aa17.03■□□□□ 0.32
LMNA-201ENST00000347559 MRPL12P52815 198 aaKnown RBP17.03■□□□□ 0.32
LMNA-201ENST00000347559 HLTFQ14527 1009 aaKnown RBP eCLIP17.03■□□□□ 0.32
LMNA-201ENST00000347559 MFSD6Q6ZSS7 791 aa17.03■□□□□ 0.32
LMNA-201ENST00000347559 C2CD5Q86YS7 1000 aa17.03■□□□□ 0.32
LMNA-201ENST00000347559 ZNF507Q8TCN5 953 aa17.03■□□□□ 0.32
LMNA-201ENST00000347559 PURBQ96QR8 312 aaKnown RBP17.03■□□□□ 0.32
LMNA-201ENST00000347559 TSGA10Q9BZW7 698 aa17.03■□□□□ 0.32
LMNA-201ENST00000347559 ACTR5Q9H9F9 607 aaPredicted RBP17.03■□□□□ 0.32
LMNA-201ENST00000347559 PIH1D3Q9NQM4 214 aaKnown RBP17.03■□□□□ 0.32
LMNA-201ENST00000347559 EXOC1Q9NV70 894 aa17.03■□□□□ 0.32
LMNA-201ENST00000347559 PCDHA13Q9Y5I0 950 aa17.03■□□□□ 0.32
LMNA-201ENST00000347559 TACC3Q9Y6A5 838 aa17.03■□□□□ 0.32
LMNA-201ENST00000347559 EID1Q9Y6B2 187 aa17.03■□□□□ 0.32
LMNA-201ENST00000347559 RGPD2P0DJD1 1756 aa17.03■□□□□ 0.32
LMNA-201ENST00000347559 PLEKHG1Q9ULL1 1385 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms