RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 ZBED2Q9BTP6 218 aa18.24■□□□□ 0.51
SMARCA4-201ENST00000344626 FBXO40Q9UH90 709 aa18.24■□□□□ 0.51
SMARCA4-201ENST00000344626 HERC5Q9UII4 1024 aaKnown RBP18.24■□□□□ 0.51
SMARCA4-201ENST00000344626 PAK1Q13153 545 aa18.24■□□□□ 0.51
SMARCA4-201ENST00000344626 CSGALNACT2Q8N6G5 542 aa18.24■□□□□ 0.51
SMARCA4-201ENST00000344626 DDX12PQ92771 950 aa18.24■□□□□ 0.51
SMARCA4-201ENST00000344626 ZFYVE28Q9HCC9 887 aa18.24■□□□□ 0.51
SMARCA4-201ENST00000344626 TBC1D7Q9P0N9 293 aa18.24■□□□□ 0.51
SMARCA4-201ENST00000344626 PALM3A6NDB9 673 aaPredicted RBP18.24■□□□□ 0.51
SMARCA4-201ENST00000344626 KRT19P08727 400 aa18.24■□□□□ 0.51
SMARCA4-201ENST00000344626 EZRP15311 586 aaKnown RBP18.24■□□□□ 0.51
SMARCA4-201ENST00000344626 LMAN1P49257 510 aa18.24■□□□□ 0.51
SMARCA4-201ENST00000344626 CXCL9Q07325 125 aa18.24■□□□□ 0.51
SMARCA4-201ENST00000344626 SNAPC2Q13487 334 aa18.24■□□□□ 0.51
SMARCA4-201ENST00000344626 FAM102BQ5T8I3 360 aa18.24■□□□□ 0.51
SMARCA4-201ENST00000344626 SLF1Q9BQI6 1058 aa18.24■□□□□ 0.51
SMARCA4-201ENST00000344626 EXOC3O60645 756 aa18.23■□□□□ 0.51
SMARCA4-201ENST00000344626 ZNF202O95125 648 aa18.23■□□□□ 0.51
SMARCA4-201ENST00000344626 CCND2P30279 289 aa18.23■□□□□ 0.51
SMARCA4-201ENST00000344626 SNW1Q13573 536 aaKnown RBP18.23■□□□□ 0.51
SMARCA4-201ENST00000344626 RAPGEF1Q13905 1077 aa18.23■□□□□ 0.51
SMARCA4-201ENST00000344626 ADPGKQ9BRR6 497 aa18.23■□□□□ 0.51
SMARCA4-201ENST00000344626 CRACR2AQ9BSW2 395 aa18.23■□□□□ 0.51
SMARCA4-201ENST00000344626 LAD1O00515 517 aa18.23■□□□□ 0.51
SMARCA4-201ENST00000344626 TACC1O75410 805 aa18.23■□□□□ 0.51
SMARCA4-201ENST00000344626 MFSD14CQ5VZR4 134 aa18.23■□□□□ 0.51
SMARCA4-201ENST00000344626 DCP1AQ9NPI6 582 aaPredicted RBP18.23■□□□□ 0.51
SMARCA4-201ENST00000344626 KRT5P13647 590 aa18.23■□□□□ 0.51
SMARCA4-201ENST00000344626 KIAA0753Q2KHM9 967 aa18.23■□□□□ 0.51
SMARCA4-201ENST00000344626 RNF207Q6ZRF8 634 aa18.23■□□□□ 0.51
SMARCA4-201ENST00000344626 AGBL3Q8NEM8 1001 aa18.23■□□□□ 0.51
SMARCA4-201ENST00000344626 DCAF4Q8WV16 495 aa18.23■□□□□ 0.51
SMARCA4-201ENST00000344626 PCDHA4Q9UN74 947 aa18.23■□□□□ 0.51
SMARCA4-201ENST00000344626 GCFC2P16383 781 aaKnown RBP18.23■□□□□ 0.51
SMARCA4-201ENST00000344626 TRAPPC10P48553 1259 aa18.23■□□□□ 0.51
SMARCA4-201ENST00000344626 POLGP54098 1239 aaPredicted RBP18.23■□□□□ 0.51
SMARCA4-201ENST00000344626 DGKHQ86XP1 1220 aa18.23■□□□□ 0.51
SMARCA4-201ENST00000344626 TMEM39BQ9GZU3 492 aa18.23■□□□□ 0.51
SMARCA4-201ENST00000344626 BRPF3Q9ULD4 1205 aa18.23■□□□□ 0.51
SMARCA4-201ENST00000344626 EEF2P13639 858 aaKnown RBP18.22■□□□□ 0.51
SMARCA4-201ENST00000344626 CDC37Q16543 378 aaPredicted RBP18.22■□□□□ 0.51
SMARCA4-201ENST00000344626 EXOC8Q8IYI6 725 aa18.22■□□□□ 0.51
SMARCA4-201ENST00000344626 GOLGA1Q92805 767 aa18.22■□□□□ 0.51
SMARCA4-201ENST00000344626 NOX5Q96PH1 765 aa18.22■□□□□ 0.51
SMARCA4-201ENST00000344626 AKT3Q9Y243 479 aa18.22■□□□□ 0.51
SMARCA4-201ENST00000344626 ATP6V0A1Q93050 837 aa18.22■□□□□ 0.51
SMARCA4-201ENST00000344626 ZSWIM5Q9P217 1185 aa18.22■□□□□ 0.51
SMARCA4-201ENST00000344626 NEURL4Q96JN8 1562 aa18.22■□□□□ 0.51
SMARCA4-201ENST00000344626 HOXA13P31271 388 aaPredicted RBP18.22■□□□□ 0.51
SMARCA4-201ENST00000344626 ANKRD13AQ8IZ07 590 aa18.22■□□□□ 0.51
SMARCA4-201ENST00000344626 NACA2Q9H009 215 aa18.22■□□□□ 0.51
SMARCA4-201ENST00000344626 CLSTN2Q9H4D0 955 aa18.22■□□□□ 0.51
SMARCA4-201ENST00000344626 LRFN2Q9ULH4 789 aa18.22■□□□□ 0.51
SMARCA4-201ENST00000344626 TECP42680 631 aa18.22■□□□□ 0.51
SMARCA4-201ENST00000344626 FAM193AP78312 1265 aa18.22■□□□□ 0.51
SMARCA4-201ENST00000344626 KIF5AQ12840 1032 aa18.22■□□□□ 0.51
SMARCA4-201ENST00000344626 POSTNQ15063 836 aa18.22■□□□□ 0.51
SMARCA4-201ENST00000344626 RGS22Q8NE09 1264 aa18.22■□□□□ 0.51
SMARCA4-201ENST00000344626 UTYO14607 1347 aa18.22■□□□□ 0.51
SMARCA4-201ENST00000344626 UBN2Q6ZU65 1347 aa18.22■□□□□ 0.51
SMARCA4-201ENST00000344626 REREQ9P2R6 1566 aa18.22■□□□□ 0.51
SMARCA4-201ENST00000344626 LRRIQ4A6NIV6 560 aa18.22■□□□□ 0.51
SMARCA4-201ENST00000344626 TBC1D8BQ0IIM8 1120 aa18.22■□□□□ 0.51
SMARCA4-201ENST00000344626 CNGA4Q8IV77 575 aa18.22■□□□□ 0.51
SMARCA4-201ENST00000344626 PGBD1Q96JS3 809 aa18.22■□□□□ 0.51
SMARCA4-201ENST00000344626 APOL6Q9BWW8 343 aa18.22■□□□□ 0.51
SMARCA4-201ENST00000344626 VWDEQ8N2E2 1590 aa18.21■□□□□ 0.51
SMARCA4-201ENST00000344626 P4HA1P13674 534 aa18.21■□□□□ 0.51
SMARCA4-201ENST00000344626 TRIM14Q14142 442 aa18.21■□□□□ 0.51
SMARCA4-201ENST00000344626 GPBP1Q86WP2 473 aa18.21■□□□□ 0.51
SMARCA4-201ENST00000344626 MAPK8IP1Q9UQF2 711 aa18.21■□□□□ 0.51
SMARCA4-201ENST00000344626 KRT86O43790 486 aa18.21■□□□□ 0.51
SMARCA4-201ENST00000344626 GOLGA5Q8TBA6 731 aa18.21■□□□□ 0.51
SMARCA4-201ENST00000344626 RICTORQ6R327 1708 aa18.21■□□□□ 0.51
SMARCA4-201ENST00000344626 MTMR2Q13614 643 aa18.21■□□□□ 0.51
SMARCA4-201ENST00000344626 GBA2Q9HCG7 927 aaPredicted RBP18.21■□□□□ 0.51
SMARCA4-201ENST00000344626 ITSN1Q15811 1721 aa18.21■□□□□ 0.51
SMARCA4-201ENST00000344626 TNS2Q63HR2 1409 aa18.21■□□□□ 0.51
SMARCA4-201ENST00000344626 GNG11P61952 73 aa18.21■□□□□ 0.51
SMARCA4-201ENST00000344626 SIRT2Q8IXJ6 389 aa18.21■□□□□ 0.51
SMARCA4-201ENST00000344626 LRRC4BQ9NT99 713 aa18.21■□□□□ 0.51
SMARCA4-201ENST00000344626 RNF146Q9NTX7 359 aa18.21■□□□□ 0.51
SMARCA4-201ENST00000344626 KCNH4Q9UQ05 1017 aa18.21■□□□□ 0.51
SMARCA4-201ENST00000344626 F5H6K3 240 aa18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 POLRMTO00411 1230 aaKnown RBP18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 SH2B2O14492 632 aaPredicted RBP18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 MYL3P08590 195 aa18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 FCER1AP12319 257 aa18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 LIFRP42702 1097 aa18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 CKAP4Q07065 602 aaKnown RBP18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 KLRC3Q07444 240 aa18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 TFDP1Q14186 410 aa18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 LRCH2Q5VUJ6 765 aa18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 PI4K2BQ8TCG2 481 aa18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 ZFP91Q96JP5 570 aaPredicted RBP18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 WDR11Q9BZH6 1224 aa18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 SYNRGQ9UMZ2 1314 aa18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 STAT3P40763 770 aa18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 ZNF577Q9BSK1 485 aa18.2■□□□□ 0.5
SMARCA4-201ENST00000344626 FTOQ9C0B1 505 aaKnown RBP eCLIP18.2■□□□□ 0.52e-7■■■□□ 16.1
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