RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 GDAQ9Y2T3 454 aa10.8□□□□□ -0.68
HOXA1-201ENST00000343060 ERICH2A1L162 156 aa10.8□□□□□ -0.68
HOXA1-201ENST00000343060 NDUFAB1O14561 156 aa10.8□□□□□ -0.68
HOXA1-201ENST00000343060 A1BGP04217 495 aa10.8□□□□□ -0.68
HOXA1-201ENST00000343060 HNRNPH3P31942 346 aaKnown RBP10.8□□□□□ -0.68
HOXA1-201ENST00000343060 PAXIP1Q6ZW49 1069 aaPredicted RBP10.8□□□□□ -0.68
HOXA1-201ENST00000343060 CD302Q8IX05 232 aa10.8□□□□□ -0.68
HOXA1-201ENST00000343060 CMTR1Q8N1G2 835 aaKnown RBP10.8□□□□□ -0.68
HOXA1-201ENST00000343060 MREGQ8N565 214 aa10.8□□□□□ -0.68
HOXA1-201ENST00000343060 HDAC7Q8WUI4 952 aa10.8□□□□□ -0.68
HOXA1-201ENST00000343060 STAMQ92783 540 aa10.8□□□□□ -0.68
HOXA1-201ENST00000343060 ORAI2Q96SN7 254 aa10.8□□□□□ -0.68
HOXA1-201ENST00000343060 STIM2Q9P246 746 aa10.8□□□□□ -0.68
HOXA1-201ENST00000343060 CAPN7Q9Y6W3 813 aa10.8□□□□□ -0.68
HOXA1-201ENST00000343060 HSF2BPO75031 334 aa10.79□□□□□ -0.68
HOXA1-201ENST00000343060 IPO7O95373 1038 aaKnown RBP10.79□□□□□ -0.68
HOXA1-201ENST00000343060 TCP1P17987 556 aaKnown RBP10.79□□□□□ -0.68
HOXA1-201ENST00000343060 GNAT2P19087 354 aa10.79□□□□□ -0.68
HOXA1-201ENST00000343060 NAP1L1P55209 391 aaKnown RBP10.79□□□□□ -0.68
HOXA1-201ENST00000343060 PTGDRQ13258 359 aa10.79□□□□□ -0.68
HOXA1-201ENST00000343060 PDCLQ13371 301 aa10.79□□□□□ -0.68
HOXA1-201ENST00000343060 GLE1Q53GS7 698 aaKnown RBP10.79□□□□□ -0.68
HOXA1-201ENST00000343060 MICALCLQ6ZW33 695 aa10.79□□□□□ -0.68
HOXA1-201ENST00000343060 ZBTB38Q8NAP3 1195 aaPredicted RBP10.79□□□□□ -0.68
HOXA1-201ENST00000343060 IQCDQ96DY2 449 aa10.79□□□□□ -0.68
HOXA1-201ENST00000343060 RNF41Q9H4P4 317 aaPredicted RBP10.79□□□□□ -0.68
HOXA1-201ENST00000343060 SH2D4AQ9H788 454 aa10.79□□□□□ -0.68
HOXA1-201ENST00000343060 SAMM50Q9Y512 469 aa10.79□□□□□ -0.68
HOXA1-201ENST00000343060 CEP83Q9Y592 693 aa10.79□□□□□ -0.68
HOXA1-201ENST00000343060 ZNF263O14978 683 aa10.79□□□□□ -0.68
HOXA1-201ENST00000343060 TACC1O75410 805 aa10.79□□□□□ -0.68
HOXA1-201ENST00000343060 KIAA0754O94854 1291 aa10.79□□□□□ -0.68
HOXA1-201ENST00000343060 LCA5LO95447 670 aa10.79□□□□□ -0.68
HOXA1-201ENST00000343060 PHKA1P46020 1223 aa10.79□□□□□ -0.68
HOXA1-201ENST00000343060 PMS1P54277 932 aaKnown RBP10.79□□□□□ -0.68
HOXA1-201ENST00000343060 KIF5AQ12840 1032 aa10.79□□□□□ -0.68
HOXA1-201ENST00000343060 ZNF174Q15697 407 aa10.79□□□□□ -0.68
HOXA1-201ENST00000343060 IL17AQ16552 155 aa10.79□□□□□ -0.68
HOXA1-201ENST00000343060 SKIDA1Q1XH10 827 aa10.79□□□□□ -0.68
HOXA1-201ENST00000343060 TTI2Q6NXR4 508 aa10.79□□□□□ -0.68
HOXA1-201ENST00000343060 CCDC82Q8N4S0 544 aa10.79□□□□□ -0.68
HOXA1-201ENST00000343060 CCDC155Q8N6L0 562 aa10.79□□□□□ -0.68
HOXA1-201ENST00000343060 OTUD6BQ8N6M0 293 aa10.79□□□□□ -0.68
HOXA1-201ENST00000343060 EPN3Q9H201 632 aa10.79□□□□□ -0.68
HOXA1-201ENST00000343060 JADE2Q9NQC1 790 aa10.79□□□□□ -0.68
HOXA1-201ENST00000343060 AGPAT5Q9NUQ2 364 aa10.79□□□□□ -0.68
HOXA1-201ENST00000343060 EXOC1Q9NV70 894 aa10.79□□□□□ -0.68
HOXA1-201ENST00000343060 ZNHIT6Q9NWK9 470 aaKnown RBP10.79□□□□□ -0.68
HOXA1-201ENST00000343060 HYOU1Q9Y4L1 999 aa10.79□□□□□ -0.68
HOXA1-201ENST00000343060 TRIM49BA6NDI0 452 aa10.78□□□□□ -0.68
HOXA1-201ENST00000343060 NUTM2BA6NNL0 878 aaPredicted RBP10.78□□□□□ -0.68
HOXA1-201ENST00000343060 NUTM2EB1AL46 878 aaPredicted RBP10.78□□□□□ -0.68
HOXA1-201ENST00000343060 MYL1P05976 194 aa10.78□□□□□ -0.68
HOXA1-201ENST00000343060 LSP1P33241 339 aa10.78□□□□□ -0.68
HOXA1-201ENST00000343060 SETQ01105 290 aaPredicted RBP10.78□□□□□ -0.68
HOXA1-201ENST00000343060 DRP2Q13474 957 aa10.78□□□□□ -0.68
HOXA1-201ENST00000343060 NAA35Q5VZE5 725 aa10.78□□□□□ -0.68
HOXA1-201ENST00000343060 ARL6IP4Q66PJ3 421 aaKnown RBP10.78□□□□□ -0.68
HOXA1-201ENST00000343060 IQCKQ8N0W5 287 aa10.78□□□□□ -0.68
HOXA1-201ENST00000343060 ZIM3Q96PE6 472 aa10.78□□□□□ -0.68
HOXA1-201ENST00000343060 RUFY1Q96T51 708 aa10.78□□□□□ -0.68
HOXA1-201ENST00000343060 ZKSCAN3Q9BRR0 538 aa10.78□□□□□ -0.68
HOXA1-201ENST00000343060 VCPKMTQ9H867 229 aa10.78□□□□□ -0.68
HOXA1-201ENST00000343060 CAPN6Q9Y6Q1 641 aa10.78□□□□□ -0.68
HOXA1-201ENST00000343060 DUSP10Q9Y6W6 482 aa10.78□□□□□ -0.68
HOXA1-201ENST00000343060 DUOX1Q9NRD9 1551 aa10.78□□□□□ -0.68
HOXA1-201ENST00000343060 MYO1FO00160 1098 aa10.78□□□□□ -0.68
HOXA1-201ENST00000343060 FGFR2P21802 821 aa10.78□□□□□ -0.68
HOXA1-201ENST00000343060 LONP1P36776 959 aaKnown RBP10.78□□□□□ -0.68
HOXA1-201ENST00000343060 ZSCAN29Q8IWY8 852 aaPredicted RBP10.78□□□□□ -0.68
HOXA1-201ENST00000343060 NUP133Q8WUM0 1156 aa10.78□□□□□ -0.68
HOXA1-201ENST00000343060 ERGIC2Q96RQ1 377 aa10.78□□□□□ -0.68
HOXA1-201ENST00000343060 OSBPL9Q96SU4 736 aa10.78□□□□□ -0.68
HOXA1-201ENST00000343060 ARMT1Q9H993 441 aa10.78□□□□□ -0.68
HOXA1-201ENST00000343060 GDF3Q9NR23 364 aa10.78□□□□□ -0.68
HOXA1-201ENST00000343060 MACROD2A1Z1Q3 448 aa10.77□□□□□ -0.69
HOXA1-201ENST00000343060 CHUKO15111 745 aa10.77□□□□□ -0.69
HOXA1-201ENST00000343060 KLRC4O43908 158 aa10.77□□□□□ -0.69
HOXA1-201ENST00000343060 RASSF9O75901 435 aa10.77□□□□□ -0.69
HOXA1-201ENST00000343060 RHOBTB3O94955 611 aa10.77□□□□□ -0.69
HOXA1-201ENST00000343060 PDE8BO95263 885 aa10.77□□□□□ -0.69
HOXA1-201ENST00000343060 SMTNP53814 917 aa10.77□□□□□ -0.69
HOXA1-201ENST00000343060 PPARAQ07869 468 aa10.77□□□□□ -0.69
HOXA1-201ENST00000343060 PREPLQ4J6C6 727 aaPredicted RBP10.77□□□□□ -0.69
HOXA1-201ENST00000343060 LDHAL6AQ6ZMR3 332 aa10.77□□□□□ -0.69
HOXA1-201ENST00000343060 KRT28Q7Z3Y7 464 aa10.77□□□□□ -0.69
HOXA1-201ENST00000343060 NACAP1Q9BZK3 213 aa10.77□□□□□ -0.69
HOXA1-201ENST00000343060 RBM28Q9NW13 759 aaKnown RBP10.77□□□□□ -0.69
HOXA1-201ENST00000343060 ANAPC4Q9UJX5 808 aa10.77□□□□□ -0.69
HOXA1-201ENST00000343060 ANKRD36CQ5JPF3 1778 aa10.77□□□□□ -0.69
HOXA1-201ENST00000343060 TNKSO95271 1327 aa10.77□□□□□ -0.69
HOXA1-201ENST00000343060 B4DLN1 442 aa10.77□□□□□ -0.69
HOXA1-201ENST00000343060 USO1O60763 962 aaKnown RBP10.77□□□□□ -0.69
HOXA1-201ENST00000343060 TRIM21P19474 475 aaKnown RBP10.77□□□□□ -0.69
HOXA1-201ENST00000343060 ITGA6P23229 1130 aa10.77□□□□□ -0.69
HOXA1-201ENST00000343060 ZC3H6P61129 1189 aaKnown RBP10.77□□□□□ -0.69
HOXA1-201ENST00000343060 ACTN3Q08043 901 aaPredicted RBP10.77□□□□□ -0.69
HOXA1-201ENST00000343060 MAP3K12Q12852 859 aa10.77□□□□□ -0.69
HOXA1-201ENST00000343060 PTGISQ16647 500 aa10.77□□□□□ -0.69
HOXA1-201ENST00000343060 C6orf89Q6UWU4 347 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms