RNA–Protein interactions for RNA: ENST00000342905.10

NLRC4-201, Transcript of NLR family CARD domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene NLRC4, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-201ENST00000342905 FOSBP53539 338 aa10.08□□□□□ -0.8
NLRC4-201ENST00000342905 IRX3P78415 501 aaPredicted RBP10.08□□□□□ -0.8
NLRC4-201ENST00000342905 LACTBP83111 547 aaPredicted RBP10.08□□□□□ -0.8
NLRC4-201ENST00000342905 PPP2R5BQ15173 497 aa10.08□□□□□ -0.8
NLRC4-201ENST00000342905 FOXD4L5Q5VV16 416 aaPredicted RBP10.08□□□□□ -0.8
NLRC4-201ENST00000342905 LARP1BQ659C4 914 aaKnown RBP10.08□□□□□ -0.8
NLRC4-201ENST00000342905 CPLX2Q6PUV4 134 aaKnown RBP10.08□□□□□ -0.8
NLRC4-201ENST00000342905 RASGRP2Q7LDG7 609 aa10.08□□□□□ -0.8
NLRC4-201ENST00000342905 NBPF11Q86T75 865 aa10.08□□□□□ -0.8
NLRC4-201ENST00000342905 CMTR1Q8N1G2 835 aaKnown RBP10.08□□□□□ -0.8
NLRC4-201ENST00000342905 LRRC47Q8N1G4 583 aaKnown RBP10.08□□□□□ -0.8
NLRC4-201ENST00000342905 FAM184AQ8NB25 1140 aa10.08□□□□□ -0.8
NLRC4-201ENST00000342905 CTCFLQ8NI51 663 aaPredicted RBP10.08□□□□□ -0.8
NLRC4-201ENST00000342905 CD99L2Q8TCZ2 262 aa10.08□□□□□ -0.8
NLRC4-201ENST00000342905 ACER1Q8TDN7 264 aa10.08□□□□□ -0.8
NLRC4-201ENST00000342905 GTF3C2Q8WUA4 911 aaPredicted RBP10.08□□□□□ -0.8
NLRC4-201ENST00000342905 FOXD4L4Q8WXT5 416 aaPredicted RBP10.08□□□□□ -0.8
NLRC4-201ENST00000342905 TNPO1Q92973 898 aaKnown RBP10.08□□□□□ -0.8
NLRC4-201ENST00000342905 MAP3K14Q99558 947 aa10.08□□□□□ -0.8
NLRC4-201ENST00000342905 ASCC2Q9H1I8 757 aaPredicted RBP10.08□□□□□ -0.8
NLRC4-201ENST00000342905 EFCC1Q9HA90 598 aa10.08□□□□□ -0.8
NLRC4-201ENST00000342905 EMILIN3Q9NT22 766 aa10.08□□□□□ -0.8
NLRC4-201ENST00000342905 RBM28Q9NW13 759 aaKnown RBP10.08□□□□□ -0.8
NLRC4-201ENST00000342905 ORC3Q9UBD5 711 aaPredicted RBP10.08□□□□□ -0.8
NLRC4-201ENST00000342905 CPA4Q9UI42 421 aa10.08□□□□□ -0.8
NLRC4-201ENST00000342905 MTMR7Q9Y216 660 aa10.08□□□□□ -0.8
NLRC4-201ENST00000342905 CNTNAP5Q8WYK1 1306 aa10.07□□□□□ -0.8
NLRC4-201ENST00000342905 CCDC196A0A1B0GTZ2 297 aa10.07□□□□□ -0.8
NLRC4-201ENST00000342905 VPS37CA5D8V6 355 aaPredicted RBP10.07□□□□□ -0.8
NLRC4-201ENST00000342905 FMNL1O95466 1100 aaPredicted RBP10.07□□□□□ -0.8
NLRC4-201ENST00000342905 EEF2P13639 858 aaKnown RBP10.07□□□□□ -0.8
NLRC4-201ENST00000342905 VCAM1P19320 739 aa10.07□□□□□ -0.8
NLRC4-201ENST00000342905 PDCP20941 246 aa10.07□□□□□ -0.8
NLRC4-201ENST00000342905 SSRP1Q08945 709 aaKnown RBP10.07□□□□□ -0.8
NLRC4-201ENST00000342905 ZYXQ15942 572 aaKnown RBP10.07□□□□□ -0.8
NLRC4-201ENST00000342905 FAM110CQ1W6H9 321 aa10.07□□□□□ -0.8
NLRC4-201ENST00000342905 FBXO46Q6PJ61 603 aaPredicted RBP10.07□□□□□ -0.8
NLRC4-201ENST00000342905 TMTC3Q6ZXV5 915 aa10.07□□□□□ -0.8
NLRC4-201ENST00000342905 OTOP1Q7RTM1 612 aa10.07□□□□□ -0.8
NLRC4-201ENST00000342905 LPAR1Q92633 364 aa10.07□□□□□ -0.8
NLRC4-201ENST00000342905 ABHD8Q96I13 439 aa10.07□□□□□ -0.8
NLRC4-201ENST00000342905 SLC26A6Q9BXS9 759 aa10.07□□□□□ -0.8
NLRC4-201ENST00000342905 NYAP2Q9P242 653 aa10.07□□□□□ -0.8
NLRC4-201ENST00000342905 CLIP2Q9UDT6 1046 aa10.07□□□□□ -0.8
NLRC4-201ENST00000342905 MAD2L2Q9UI95 211 aa10.07□□□□□ -0.8
NLRC4-201ENST00000342905 MTMR6Q9Y217 621 aa10.07□□□□□ -0.8
NLRC4-201ENST00000342905 TRIM17Q9Y577 477 aa10.07□□□□□ -0.8
NLRC4-201ENST00000342905 ZNFX1Q9P2E3 1918 aaKnown RBP10.07□□□□□ -0.8
NLRC4-201ENST00000342905 A0A1W2PRG0 241 aa10.06□□□□□ -0.8
NLRC4-201ENST00000342905 USP17L15C9J2P7 530 aa10.06□□□□□ -0.8
NLRC4-201ENST00000342905 USP17L13C9JLJ4 530 aa10.06□□□□□ -0.8
NLRC4-201ENST00000342905 USP17L11C9JVI0 530 aa10.06□□□□□ -0.8
NLRC4-201ENST00000342905 USP17L18D6R9N7 530 aa10.06□□□□□ -0.8
NLRC4-201ENST00000342905 USP17L22D6RA61 530 aa10.06□□□□□ -0.8
NLRC4-201ENST00000342905 USP17L17D6RBQ6 530 aa10.06□□□□□ -0.8
NLRC4-201ENST00000342905 USP17L19D6RCP7 530 aa10.06□□□□□ -0.8
NLRC4-201ENST00000342905 USP17L20D6RJB6 530 aa10.06□□□□□ -0.8
NLRC4-201ENST00000342905 SNPHO15079 494 aa10.06□□□□□ -0.8
NLRC4-201ENST00000342905 ZSCAN22P10073 491 aaPredicted RBP10.06□□□□□ -0.8
NLRC4-201ENST00000342905 KIF5BP33176 963 aa10.06□□□□□ -0.8
NLRC4-201ENST00000342905 ATP2B2Q01814 1243 aa10.06□□□□□ -0.8
NLRC4-201ENST00000342905 USP17L24Q0WX57 530 aa10.06□□□□□ -0.8
NLRC4-201ENST00000342905 FUT2Q10981 343 aa10.06□□□□□ -0.8
NLRC4-201ENST00000342905 PPP4R3BQ5MIZ7 849 aa10.06□□□□□ -0.8
NLRC4-201ENST00000342905 SIAH1Q8IUQ4 282 aa10.06□□□□□ -0.8
NLRC4-201ENST00000342905 STAG2Q8N3U4 1231 aa10.06□□□□□ -0.8
NLRC4-201ENST00000342905 CCDC82Q8N4S0 544 aa10.06□□□□□ -0.8
NLRC4-201ENST00000342905 SRBD1Q8N5C6 995 aaKnown RBP10.06□□□□□ -0.8
NLRC4-201ENST00000342905 AIFM3Q96NN9 605 aa10.06□□□□□ -0.8
NLRC4-201ENST00000342905 SYNPO2Q9UMS6 1093 aa10.06□□□□□ -0.8
NLRC4-201ENST00000342905 TMX2Q9Y320 296 aa10.06□□□□□ -0.8
NLRC4-201ENST00000342905 KIF3AQ9Y496 699 aa10.06□□□□□ -0.8
NLRC4-201ENST00000342905 A0A0G2JMZ2 1700 aa10.05□□□□□ -0.8
NLRC4-201ENST00000342905 WDR81Q562E7 1941 aa10.05□□□□□ -0.8
NLRC4-201ENST00000342905 PALM3A6NDB9 673 aaPredicted RBP10.05□□□□□ -0.8
NLRC4-201ENST00000342905 F13A1P00488 732 aa10.05□□□□□ -0.8
NLRC4-201ENST00000342905 GOLGA8HP0CJ92 632 aa10.05□□□□□ -0.8
NLRC4-201ENST00000342905 PDHBP11177 359 aa10.05□□□□□ -0.8
NLRC4-201ENST00000342905 PRMT2P55345 433 aa10.05□□□□□ -0.8
NLRC4-201ENST00000342905 FCGRTP55899 365 aa10.05□□□□□ -0.8
NLRC4-201ENST00000342905 HERVK_113P62684 666 aa10.05□□□□□ -0.8
NLRC4-201ENST00000342905 SLC35G1Q2M3R5 365 aa10.05□□□□□ -0.8
NLRC4-201ENST00000342905 IFFO2Q5TF58 517 aa10.05□□□□□ -0.8
NLRC4-201ENST00000342905 TRIM22Q8IYM9 498 aa10.05□□□□□ -0.8
NLRC4-201ENST00000342905 ANKRD13CQ8N6S4 541 aa10.05□□□□□ -0.8
NLRC4-201ENST00000342905 MKL1Q969V6 931 aa10.05□□□□□ -0.8
NLRC4-201ENST00000342905 ALG1Q9BT22 464 aa10.05□□□□□ -0.8
NLRC4-201ENST00000342905 RNF26Q9BY78 433 aaPredicted RBP10.05□□□□□ -0.8
NLRC4-201ENST00000342905 RPAP3Q9H6T3 665 aaPredicted RBP10.05□□□□□ -0.8
NLRC4-201ENST00000342905 VCPKMTQ9H867 229 aa10.05□□□□□ -0.8
NLRC4-201ENST00000342905 GOPCQ9HD26 462 aa10.05□□□□□ -0.8
NLRC4-201ENST00000342905 MORF4L1Q9UBU8 362 aa10.05□□□□□ -0.8
NLRC4-201ENST00000342905 FRMPD2Q68DX3 1309 aaPredicted RBP10.05□□□□□ -0.8
NLRC4-201ENST00000342905 H3BQV1 296 aa10.04□□□□□ -0.8
NLRC4-201ENST00000342905 WDR46O15213 610 aaKnown RBP10.04□□□□□ -0.8
NLRC4-201ENST00000342905 PRPF3O43395 683 aaKnown RBP10.04□□□□□ -0.8
NLRC4-201ENST00000342905 DEXIO95424 95 aa10.04□□□□□ -0.8
NLRC4-201ENST00000342905 PARP1P09874 1014 aaKnown RBP10.04□□□□□ -0.8
NLRC4-201ENST00000342905 SNHG28P0DPA3 235 aa10.04□□□□□ -0.8
NLRC4-201ENST00000342905 PDIA4P13667 645 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms