RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 VWCEQ96DN2 955 aa20.31■□□□□ 0.84
TRA2B-202ENST00000342294 HIPK3Q9H422 1215 aa20.31■□□□□ 0.84
TRA2B-202ENST00000342294 ASTN1O14525 1302 aa20.3■□□□□ 0.84
TRA2B-202ENST00000342294 MYH8P13535 1937 aa20.3■□□□□ 0.84
TRA2B-202ENST00000342294 TFF2Q03403 129 aa20.3■□□□□ 0.84
TRA2B-202ENST00000342294 ITPRIPQ8IWB1 547 aa20.3■□□□□ 0.84
TRA2B-202ENST00000342294 AMOTL1Q8IY63 956 aa20.3■□□□□ 0.84
TRA2B-202ENST00000342294 ARIH1Q9Y4X5 557 aaPredicted RBP20.3■□□□□ 0.84
TRA2B-202ENST00000342294 GRIN2DO15399 1336 aa20.29■□□□□ 0.84
TRA2B-202ENST00000342294 F5H6K3 240 aa20.29■□□□□ 0.84
TRA2B-202ENST00000342294 NDUFB10O96000 172 aa20.29■□□□□ 0.84
TRA2B-202ENST00000342294 POU3F3P20264 500 aaPredicted RBP20.29■□□□□ 0.84
TRA2B-202ENST00000342294 RABGGTBP53611 331 aa20.29■□□□□ 0.84
TRA2B-202ENST00000342294 BEX3Q00994 111 aa20.29■□□□□ 0.84
TRA2B-202ENST00000342294 KLRC3Q07444 240 aa20.29■□□□□ 0.84
TRA2B-202ENST00000342294 HSP90AB4PQ58FF6 505 aa20.29■□□□□ 0.84
TRA2B-202ENST00000342294 CCDC144CPQ8IYA2 1237 aa20.29■□□□□ 0.84
TRA2B-202ENST00000342294 CPXCR1Q8N123 301 aa20.29■□□□□ 0.84
TRA2B-202ENST00000342294 NOC4LQ9BVI4 516 aaKnown RBP20.29■□□□□ 0.84
TRA2B-202ENST00000342294 NYAP2Q9P242 653 aa20.29■□□□□ 0.84
TRA2B-202ENST00000342294 PCDHA11Q9Y5I1 949 aa20.29■□□□□ 0.84
TRA2B-202ENST00000342294 BAZ2AQ9UIF9 1905 aaKnown RBP20.28■□□□□ 0.84
TRA2B-202ENST00000342294 ERC2O15083 957 aa20.28■□□□□ 0.84
TRA2B-202ENST00000342294 ZBED4O75132 1171 aa20.28■□□□□ 0.84
TRA2B-202ENST00000342294 CABYRO75952 493 aa20.28■□□□□ 0.84
TRA2B-202ENST00000342294 CHGBP05060 677 aa20.28■□□□□ 0.84
TRA2B-202ENST00000342294 MYOGP15173 224 aa20.28■□□□□ 0.84
TRA2B-202ENST00000342294 KCNQ1P51787 676 aa20.28■□□□□ 0.84
TRA2B-202ENST00000342294 AAK1Q2M2I8 961 aa20.28■□□□□ 0.84
TRA2B-202ENST00000342294 CXCL17Q6UXB2 119 aa20.28■□□□□ 0.84
TRA2B-202ENST00000342294 FTSJ3Q8IY81 847 aaKnown RBP20.28■□□□□ 0.84
TRA2B-202ENST00000342294 ANKRD35Q8N283 1001 aa20.28■□□□□ 0.84
TRA2B-202ENST00000342294 CHST13Q8NET6 341 aa20.28■□□□□ 0.84
TRA2B-202ENST00000342294 WNT8AQ9H1J5 351 aa20.28■□□□□ 0.84
TRA2B-202ENST00000342294 SLC38A10Q9HBR0 1119 aa20.28■□□□□ 0.84
TRA2B-202ENST00000342294 RAVER2Q9HCJ3 691 aaKnown RBP20.28■□□□□ 0.84
TRA2B-202ENST00000342294 PAG1Q9NWQ8 432 aa20.28■□□□□ 0.84
TRA2B-202ENST00000342294 GNEQ9Y223 722 aaKnown RBP20.28■□□□□ 0.84
TRA2B-202ENST00000342294 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.27■□□□□ 0.84
TRA2B-202ENST00000342294 RASA1P20936 1047 aa20.27■□□□□ 0.84
TRA2B-202ENST00000342294 CCL23P55773 120 aa20.27■□□□□ 0.84
TRA2B-202ENST00000342294 ITGA7Q13683 1181 aa20.27■□□□□ 0.84
TRA2B-202ENST00000342294 PPP2R2DQ66LE6 453 aa20.27■□□□□ 0.84
TRA2B-202ENST00000342294 CLASRPQ8N2M8 674 aaKnown RBP20.27■□□□□ 0.84
TRA2B-202ENST00000342294 SEZ6LQ9BYH1 1024 aa20.27■□□□□ 0.84
TRA2B-202ENST00000342294 FBXO40Q9UH90 709 aa20.27■□□□□ 0.84
TRA2B-202ENST00000342294 SLC4A7Q9Y6M7 1214 aa20.27■□□□□ 0.84
TRA2B-202ENST00000342294 GREB1LQ9C091 1923 aaPredicted RBP20.26■□□□□ 0.83
TRA2B-202ENST00000342294 SLC4A3P48751 1232 aa20.26■□□□□ 0.83
TRA2B-202ENST00000342294 CNTN2Q02246 1040 aa20.26■□□□□ 0.83
TRA2B-202ENST00000342294 TNFAIP2Q03169 654 aa20.26■□□□□ 0.83
TRA2B-202ENST00000342294 UBE3CQ15386 1083 aa20.26■□□□□ 0.83
TRA2B-202ENST00000342294 FAM133AQ8N9E0 248 aa20.26■□□□□ 0.83
TRA2B-202ENST00000342294 DDRGK1Q96HY6 314 aa20.26■□□□□ 0.83
TRA2B-202ENST00000342294 LRFN3Q9BTN0 628 aa20.26■□□□□ 0.83
TRA2B-202ENST00000342294 TRPV6Q9H1D0 765 aa20.26■□□□□ 0.83
TRA2B-202ENST00000342294 SLC4A4Q9Y6R1 1079 aa20.26■□□□□ 0.83
TRA2B-202ENST00000342294 TCF20Q9UGU0 1960 aaKnown RBP20.25■□□□□ 0.83
TRA2B-202ENST00000342294 GBF1Q92538 1859 aa20.25■□□□□ 0.83
TRA2B-202ENST00000342294 B4GALT4O60513 344 aa20.25■□□□□ 0.83
TRA2B-202ENST00000342294 OAZ1P54368 228 aa20.25■□□□□ 0.83
TRA2B-202ENST00000342294 RPUSD2Q8IZ73 545 aaKnown RBP20.25■□□□□ 0.83
TRA2B-202ENST00000342294 MICALL1Q8N3F8 863 aa20.25■□□□□ 0.83
TRA2B-202ENST00000342294 KIF1BPQ96EK5 621 aa20.25■□□□□ 0.83
TRA2B-202ENST00000342294 AGBL1Q96MI9 1066 aa20.25■□□□□ 0.83
TRA2B-202ENST00000342294 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.25■□□□□ 0.83
TRA2B-202ENST00000342294 EPHX3Q9H6B9 360 aa20.25■□□□□ 0.83
TRA2B-202ENST00000342294 MTCH2Q9Y6C9 303 aa20.25■□□□□ 0.83
TRA2B-202ENST00000342294 MCM3APO60318 1980 aa20.25■□□□□ 0.83
TRA2B-202ENST00000342294 IGKV6D-41A0A0C4DH26 115 aa20.24■□□□□ 0.83
TRA2B-202ENST00000342294 IFIT2P09913 472 aaKnown RBP20.24■□□□□ 0.83
TRA2B-202ENST00000342294 ATP5JP18859 108 aa20.24■□□□□ 0.83
TRA2B-202ENST00000342294 FSCN1Q16658 493 aaKnown RBP20.24■□□□□ 0.83
TRA2B-202ENST00000342294 SBK1Q52WX2 424 aa20.24■□□□□ 0.83
TRA2B-202ENST00000342294 KIFC2Q96AC6 838 aa20.24■□□□□ 0.83
TRA2B-202ENST00000342294 BOLA2Q9H3K6 86 aa20.24■□□□□ 0.83
TRA2B-202ENST00000342294 ARPP21Q9UBL0 812 aaPredicted RBP20.24■□□□□ 0.83
TRA2B-202ENST00000342294 FEM1BQ9UK73 627 aa20.24■□□□□ 0.83
TRA2B-202ENST00000342294 REV3LO60673 3130 aa20.23■□□□□ 0.83
TRA2B-202ENST00000342294 ATP2A2P16615 1042 aaKnown RBP20.23■□□□□ 0.83
TRA2B-202ENST00000342294 TLK2Q86UE8 772 aa20.23■□□□□ 0.83
TRA2B-202ENST00000342294 MKL1Q969V6 931 aa20.23■□□□□ 0.83
TRA2B-202ENST00000342294 HAUS7Q99871 368 aa20.23■□□□□ 0.83
TRA2B-202ENST00000342294 PUS7LQ9H0K6 701 aaKnown RBP20.23■□□□□ 0.83
TRA2B-202ENST00000342294 CLIP2Q9UDT6 1046 aa20.23■□□□□ 0.83
TRA2B-202ENST00000342294 CTDP1Q9Y5B0 961 aaPredicted RBP20.23■□□□□ 0.83
TRA2B-202ENST00000342294 PRRC2BQ5JSZ5 2229 aaKnown RBP20.22■□□□□ 0.83
TRA2B-202ENST00000342294 SOWAHBA6NEL2 793 aa20.22■□□□□ 0.83
TRA2B-202ENST00000342294 RFXAPO00287 272 aa20.22■□□□□ 0.83
TRA2B-202ENST00000342294 TLL1O43897 1013 aa20.22■□□□□ 0.83
TRA2B-202ENST00000342294 PTGS1P23219 599 aa20.22■□□□□ 0.83
TRA2B-202ENST00000342294 NOL8Q76FK4 1167 aaKnown RBP20.22■□□□□ 0.83
TRA2B-202ENST00000342294 SCLYQ96I15 445 aa20.22■□□□□ 0.83
TRA2B-202ENST00000342294 DYNC1LI2O43237 492 aaPredicted RBP20.21■□□□□ 0.83
TRA2B-202ENST00000342294 SMPD1P17405 629 aa20.21■□□□□ 0.83
TRA2B-202ENST00000342294 PSMC6P62333 389 aa20.21■□□□□ 0.83
TRA2B-202ENST00000342294 TTLL4Q14679 1199 aa20.21■□□□□ 0.83
TRA2B-202ENST00000342294 SKIV2LQ15477 1246 aaKnown RBP20.21■□□□□ 0.83
TRA2B-202ENST00000342294 AP5M1Q9H0R1 490 aa20.21■□□□□ 0.83
TRA2B-202ENST00000342294 A1CFQ9NQ94 594 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms