RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 TOGARAM2Q6ZUX3 1019 aa22.7■■□□□ 1.22
SPG7-202ENST00000341316 CLEC10AQ8IUN9 316 aa22.7■■□□□ 1.22
SPG7-202ENST00000341316 MAPK8IP1Q9UQF2 711 aa22.7■■□□□ 1.22
SPG7-202ENST00000341316 PPP2R2CQ9Y2T4 447 aa22.7■■□□□ 1.22
SPG7-202ENST00000341316 STX10O60499 249 aa22.7■■□□□ 1.22
SPG7-202ENST00000341316 H2AFXP16104 143 aaPredicted RBP22.7■■□□□ 1.22
SPG7-202ENST00000341316 GABPAQ06546 454 aa22.7■■□□□ 1.22
SPG7-202ENST00000341316 ZNF658Q5TYW1 1059 aaPredicted RBP22.7■■□□□ 1.22
SPG7-202ENST00000341316 FCHSD1Q86WN1 690 aa22.7■■□□□ 1.22
SPG7-202ENST00000341316 RRP36Q96EU6 259 aaKnown RBP22.7■■□□□ 1.22
SPG7-202ENST00000341316 COA1Q9GZY4 146 aa22.7■■□□□ 1.22
SPG7-202ENST00000341316 FRMPD2Q68DX3 1309 aaPredicted RBP22.69■■□□□ 1.22
SPG7-202ENST00000341316 PHLPP2Q6ZVD8 1323 aa22.69■■□□□ 1.22
SPG7-202ENST00000341316 RWDD2AQ9UIY3 292 aa22.69■■□□□ 1.22
SPG7-202ENST00000341316 ANKRD31Q8N7Z5 1873 aa22.69■■□□□ 1.22
SPG7-202ENST00000341316 AKR1B1P15121 316 aa22.69■■□□□ 1.22
SPG7-202ENST00000341316 DOK7Q18PE1 504 aa22.69■■□□□ 1.22
SPG7-202ENST00000341316 MTMR4Q9NYA4 1195 aa22.69■■□□□ 1.22
SPG7-202ENST00000341316 SRGNP10124 158 aa22.68■■□□□ 1.22
SPG7-202ENST00000341316 PDHBP11177 359 aa22.68■■□□□ 1.22
SPG7-202ENST00000341316 PRCPP42785 496 aa22.68■■□□□ 1.22
SPG7-202ENST00000341316 EIF6P56537 245 aaKnown RBP22.68■■□□□ 1.22
SPG7-202ENST00000341316 RBL2Q08999 1139 aa22.68■■□□□ 1.22
SPG7-202ENST00000341316 LETM2Q2VYF4 491 aa22.68■■□□□ 1.22
SPG7-202ENST00000341316 IGSF22Q8N9C0 903 aa22.68■■□□□ 1.22
SPG7-202ENST00000341316 NELFBQ8WX92 580 aa22.68■■□□□ 1.22
SPG7-202ENST00000341316 FOCADQ5VW36 1801 aa22.68■■□□□ 1.22
SPG7-202ENST00000341316 BRWD3Q6RI45 1802 aa22.68■■□□□ 1.22
SPG7-202ENST00000341316 UBA7P41226 1012 aa22.68■■□□□ 1.22
SPG7-202ENST00000341316 PAK1Q13153 545 aa22.68■■□□□ 1.22
SPG7-202ENST00000341316 MTF1Q14872 753 aa22.68■■□□□ 1.22
SPG7-202ENST00000341316 TMC4Q7Z404 712 aa22.68■■□□□ 1.22
SPG7-202ENST00000341316 LRRC47Q8N1G4 583 aaKnown RBP22.68■■□□□ 1.22
SPG7-202ENST00000341316 CCSER1Q9C0I3 900 aa22.68■■□□□ 1.22
SPG7-202ENST00000341316 CCNT1O60563 726 aaKnown RBP22.67■■□□□ 1.22
SPG7-202ENST00000341316 CCT6AP40227 531 aaKnown RBP22.67■■□□□ 1.22
SPG7-202ENST00000341316 PRPHP41219 470 aa22.67■■□□□ 1.22
SPG7-202ENST00000341316 NONOQ15233 471 aaKnown RBP eCLIP22.67■■□□□ 1.223e-6■■■■□ 26.1
SPG7-202ENST00000341316 KRT31Q15323 416 aa22.67■■□□□ 1.22
SPG7-202ENST00000341316 KRT25Q7Z3Z0 450 aa22.67■■□□□ 1.22
SPG7-202ENST00000341316 FAM177A1Q8N128 213 aaPredicted RBP22.67■■□□□ 1.22
SPG7-202ENST00000341316 CPLX3Q8WVH0 158 aa22.67■■□□□ 1.22
SPG7-202ENST00000341316 RIOX1Q9H6W3 641 aa22.67■■□□□ 1.22
SPG7-202ENST00000341316 C6orf50Q9HD87 102 aa22.67■■□□□ 1.22
SPG7-202ENST00000341316 SEC63Q9UGP8 760 aaKnown RBP22.67■■□□□ 1.22
SPG7-202ENST00000341316 TTF2Q9UNY4 1162 aaKnown RBP22.67■■□□□ 1.22
SPG7-202ENST00000341316 AKR1B15C9JRZ8 316 aaPredicted RBP22.66■■□□□ 1.22
SPG7-202ENST00000341316 LAD1O00515 517 aa22.66■■□□□ 1.22
SPG7-202ENST00000341316 KLRC4O43908 158 aa22.66■■□□□ 1.22
SPG7-202ENST00000341316 SMARCA1P28370 1054 aa22.66■■□□□ 1.22
SPG7-202ENST00000341316 SCNN1DP51172 638 aa22.66■■□□□ 1.22
SPG7-202ENST00000341316 TERF2Q15554 542 aa22.66■■□□□ 1.22
SPG7-202ENST00000341316 ARHGAP29Q52LW3 1261 aa22.66■■□□□ 1.22
SPG7-202ENST00000341316 DPP8Q6V1X1 898 aaPredicted RBP22.66■■□□□ 1.22
SPG7-202ENST00000341316 RASSF8Q8NHQ8 419 aa22.66■■□□□ 1.22
SPG7-202ENST00000341316 CTAGE1Q96RT6 745 aa22.66■■□□□ 1.22
SPG7-202ENST00000341316 ZC3H12CQ9C0D7 883 aaKnown RBP22.66■■□□□ 1.22
SPG7-202ENST00000341316 RMND1Q9NWS8 449 aa22.66■■□□□ 1.22
SPG7-202ENST00000341316 TMEM260Q9NX78 707 aa22.66■■□□□ 1.22
SPG7-202ENST00000341316 PLIN4Q96Q06 1357 aa22.66■■□□□ 1.22
SPG7-202ENST00000341316 IGKV6D-41A0A0C4DH26 115 aa22.66■■□□□ 1.22
SPG7-202ENST00000341316 CCDC12Q8WUD4 166 aaPredicted RBP22.66■■□□□ 1.22
SPG7-202ENST00000341316 DESI2Q9BSY9 194 aa22.66■■□□□ 1.22
SPG7-202ENST00000341316 BIN2Q9UBW5 565 aaPredicted RBP22.66■■□□□ 1.22
SPG7-202ENST00000341316 ZSCAN12O43309 604 aa22.65■■□□□ 1.22
SPG7-202ENST00000341316 SLURP2P0DP57 97 aa22.65■■□□□ 1.22
SPG7-202ENST00000341316 GNA11P29992 359 aa22.65■■□□□ 1.22
SPG7-202ENST00000341316 CLCN6P51797 869 aa22.65■■□□□ 1.22
SPG7-202ENST00000341316 JAKMIP3Q5VZ66 844 aa22.65■■□□□ 1.22
SPG7-202ENST00000341316 COL23A1Q86Y22 540 aaPredicted RBP22.65■■□□□ 1.22
SPG7-202ENST00000341316 TBCKQ8TEA7 893 aa22.65■■□□□ 1.22
SPG7-202ENST00000341316 ST7Q9NRC1 585 aa22.65■■□□□ 1.22
SPG7-202ENST00000341316 KBTBD4Q9NVX7 518 aa22.65■■□□□ 1.22
SPG7-202ENST00000341316 LIMA1Q9UHB6 759 aaKnown RBP22.65■■□□□ 1.22
SPG7-202ENST00000341316 LRRC10BA6NIK2 292 aa22.65■■□□□ 1.22
SPG7-202ENST00000341316 SOWAHDA6NJG2 315 aa22.65■■□□□ 1.22
SPG7-202ENST00000341316 OR52Z1P0C646 297 aa22.65■■□□□ 1.22
SPG7-202ENST00000341316 PANX2Q96RD6 677 aa22.65■■□□□ 1.22
SPG7-202ENST00000341316 USP40Q9NVE5 1235 aa22.65■■□□□ 1.22
SPG7-202ENST00000341316 TRIM49BA6NDI0 452 aa22.64■■□□□ 1.22
SPG7-202ENST00000341316 PMS1P54277 932 aaKnown RBP22.64■■□□□ 1.22
SPG7-202ENST00000341316 SOGA3Q5TF21 947 aa22.64■■□□□ 1.22
SPG7-202ENST00000341316 NEK8Q86SG6 692 aa22.64■■□□□ 1.22
SPG7-202ENST00000341316 COA7Q96BR5 231 aa22.64■■□□□ 1.22
SPG7-202ENST00000341316 SUGT1Q9Y2Z0 365 aa22.64■■□□□ 1.22
SPG7-202ENST00000341316 ADAMTSL1Q8N6G6 1762 aa22.64■■□□□ 1.21
SPG7-202ENST00000341316 URI1O94763 535 aaPredicted RBP22.64■■□□□ 1.21
SPG7-202ENST00000341316 PLCG1P19174 1290 aa22.64■■□□□ 1.21
SPG7-202ENST00000341316 ADSSL1Q8N142 457 aa22.64■■□□□ 1.21
SPG7-202ENST00000341316 VPS16Q9H269 839 aa22.64■■□□□ 1.21
SPG7-202ENST00000341316 TAB2Q9NYJ8 693 aa22.64■■□□□ 1.21
SPG7-202ENST00000341316 GYPCP04921 128 aa22.63■■□□□ 1.21
SPG7-202ENST00000341316 SNHG28P0DPA3 235 aa22.63■■□□□ 1.21
SPG7-202ENST00000341316 FILIP1LQ4L180 1135 aa22.63■■□□□ 1.21
SPG7-202ENST00000341316 TCP11X2Q5H9J9 407 aa22.63■■□□□ 1.21
SPG7-202ENST00000341316 CABP7Q86V35 215 aa22.63■■□□□ 1.21
SPG7-202ENST00000341316 PPFIBP1Q86W92 1011 aa22.63■■□□□ 1.21
SPG7-202ENST00000341316 IRF2BP1Q8IU81 584 aa22.63■■□□□ 1.21
SPG7-202ENST00000341316 GPCPD1Q9NPB8 672 aa22.63■■□□□ 1.21
SPG7-202ENST00000341316 KCNJ18B7U540 433 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms