RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 MYH7P12883 1935 aa13.25□□□□□ -0.29
RTN3-203ENST00000341307 UBR3Q6ZT12 1888 aa13.25□□□□□ -0.29
RTN3-203ENST00000341307 ZPR1O75312 459 aa13.24□□□□□ -0.29
RTN3-203ENST00000341307 FESP07332 822 aa13.24□□□□□ -0.29
RTN3-203ENST00000341307 SLC8A1P32418 973 aa13.24□□□□□ -0.29
RTN3-203ENST00000341307 GYG1P46976 350 aa13.24□□□□□ -0.29
RTN3-203ENST00000341307 FOSBP53539 338 aa13.24□□□□□ -0.29
RTN3-203ENST00000341307 SKOR1P84550 965 aa13.24□□□□□ -0.29
RTN3-203ENST00000341307 PDCLQ13371 301 aa13.24□□□□□ -0.29
RTN3-203ENST00000341307 TUBB2AQ13885 445 aa13.24□□□□□ -0.29
RTN3-203ENST00000341307 TTF1Q15361 905 aaPredicted RBP13.24□□□□□ -0.29
RTN3-203ENST00000341307 CCDC181Q5TID7 509 aa13.24□□□□□ -0.29
RTN3-203ENST00000341307 NAA35Q5VZE5 725 aa13.24□□□□□ -0.29
RTN3-203ENST00000341307 TUBB2BQ9BVA1 445 aa13.24□□□□□ -0.29
RTN3-203ENST00000341307 TMX4Q9H1E5 349 aaPredicted RBP13.24□□□□□ -0.29
RTN3-203ENST00000341307 NCOA5Q9HCD5 579 aaKnown RBP13.24□□□□□ -0.29
RTN3-203ENST00000341307 PCDHGC5Q9Y5F6 944 aa13.24□□□□□ -0.29
RTN3-203ENST00000341307 TCRBV5S4A2TA0A5A2 114 aa13.24□□□□□ -0.29
RTN3-203ENST00000341307 IKBKBO14920 756 aa13.24□□□□□ -0.29
RTN3-203ENST00000341307 CBFA2T2O43439 604 aa13.24□□□□□ -0.29
RTN3-203ENST00000341307 AHCYL1O43865 530 aa13.24□□□□□ -0.29
RTN3-203ENST00000341307 GYS1P13807 737 aa13.24□□□□□ -0.29
RTN3-203ENST00000341307 NLRP12P59046 1061 aa13.24□□□□□ -0.29
RTN3-203ENST00000341307 LAMB3Q13751 1172 aa13.24□□□□□ -0.29
RTN3-203ENST00000341307 SF3A1Q15459 793 aaKnown RBP13.24□□□□□ -0.29
RTN3-203ENST00000341307 IMMTQ16891 758 aaKnown RBP13.24□□□□□ -0.29
RTN3-203ENST00000341307 HHATQ5VTY9 493 aa13.24□□□□□ -0.29
RTN3-203ENST00000341307 MICALCLQ6ZW33 695 aa13.24□□□□□ -0.29
RTN3-203ENST00000341307 RASSF8Q8NHQ8 419 aa13.24□□□□□ -0.29
RTN3-203ENST00000341307 SETDB2Q96T68 719 aa13.24□□□□□ -0.29
RTN3-203ENST00000341307 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.24□□□□□ -0.29
RTN3-203ENST00000341307 KDM4CQ9H3R0 1056 aa13.24□□□□□ -0.29
RTN3-203ENST00000341307 TRPC6Q9Y210 931 aa13.24□□□□□ -0.29
RTN3-203ENST00000341307 LAMB2P55268 1798 aa13.24□□□□□ -0.29
RTN3-203ENST00000341307 ZNF831Q5JPB2 1677 aa13.24□□□□□ -0.29
RTN3-203ENST00000341307 SPDYE3A6NKU9 549 aa13.23□□□□□ -0.29
RTN3-203ENST00000341307 SERPINC1P01008 464 aa13.23□□□□□ -0.29
RTN3-203ENST00000341307 HMGB1P09429 215 aaKnown RBP13.23□□□□□ -0.29
RTN3-203ENST00000341307 ABCD1P33897 745 aa13.23□□□□□ -0.29
RTN3-203ENST00000341307 ADKP55263 362 aaKnown RBP13.23□□□□□ -0.29
RTN3-203ENST00000341307 USP4Q13107 963 aa13.23□□□□□ -0.29
RTN3-203ENST00000341307 WHAMMP3Q1A5X7 153 aa13.23□□□□□ -0.29
RTN3-203ENST00000341307 CWF19L1Q69YN2 538 aaKnown RBP13.23□□□□□ -0.29
RTN3-203ENST00000341307 RAB11FIP4Q86YS3 637 aa13.23□□□□□ -0.29
RTN3-203ENST00000341307 CDC5LQ99459 802 aaKnown RBP13.23□□□□□ -0.29
RTN3-203ENST00000341307 SDF4Q9BRK5 362 aa13.23□□□□□ -0.29
RTN3-203ENST00000341307 YIPF3Q9GZM5 350 aa13.23□□□□□ -0.29
RTN3-203ENST00000341307 RTL9Q8NET4 1388 aa13.23□□□□□ -0.29
RTN3-203ENST00000341307 ARAP2Q8WZ64 1704 aa13.23□□□□□ -0.29
RTN3-203ENST00000341307 OPLAHO14841 1288 aa13.23□□□□□ -0.29
RTN3-203ENST00000341307 IMPDH2P12268 514 aa13.23□□□□□ -0.29
RTN3-203ENST00000341307 USP14P54578 494 aa13.23□□□□□ -0.29
RTN3-203ENST00000341307 AKAP17AQ02040 695 aaKnown RBP13.23□□□□□ -0.29
RTN3-203ENST00000341307 SPRED3Q2MJR0 410 aa13.23□□□□□ -0.29
RTN3-203ENST00000341307 ZNF569Q5MCW4 686 aa13.23□□□□□ -0.29
RTN3-203ENST00000341307 SPATA21Q7Z572 469 aa13.23□□□□□ -0.29
RTN3-203ENST00000341307 SUDS3Q9H7L9 328 aaPredicted RBP13.23□□□□□ -0.29
RTN3-203ENST00000341307 INCENPQ9NQS7 918 aa13.23□□□□□ -0.29
RTN3-203ENST00000341307 HAUS2Q9NVX0 235 aa13.23□□□□□ -0.29
RTN3-203ENST00000341307 CASZ1Q86V15 1759 aa13.23□□□□□ -0.29
RTN3-203ENST00000341307 SCN7AQ01118 1682 aa13.23□□□□□ -0.29
RTN3-203ENST00000341307 ZNF213O14771 459 aa13.22□□□□□ -0.29
RTN3-203ENST00000341307 MAFGO15525 162 aa13.22□□□□□ -0.29
RTN3-203ENST00000341307 KLRK1P26718 216 aa13.22□□□□□ -0.29
RTN3-203ENST00000341307 UBE3CQ15386 1083 aa13.22□□□□□ -0.29
RTN3-203ENST00000341307 SF3B3Q15393 1217 aaKnown RBP13.22□□□□□ -0.29
RTN3-203ENST00000341307 GSPT2Q8IYD1 628 aaKnown RBP13.22□□□□□ -0.29
RTN3-203ENST00000341307 B4GALNT2Q8NHY0 566 aa13.22□□□□□ -0.29
RTN3-203ENST00000341307 SMARCC2Q8TAQ2 1214 aa13.22□□□□□ -0.29
RTN3-203ENST00000341307 NSMCE1Q8WV22 266 aa13.22□□□□□ -0.29
RTN3-203ENST00000341307 USP28Q96RU2 1077 aa13.22□□□□□ -0.29
RTN3-203ENST00000341307 BLOC1S6Q9UL45 172 aa13.22□□□□□ -0.29
RTN3-203ENST00000341307 CTAGE9A4FU28 777 aa13.22□□□□□ -0.29
RTN3-203ENST00000341307 GOLGA6BA6NDN3 693 aa13.22□□□□□ -0.29
RTN3-203ENST00000341307 CCDC175P0C221 793 aa13.22□□□□□ -0.29
RTN3-203ENST00000341307 CDC25CP30307 473 aa13.22□□□□□ -0.29
RTN3-203ENST00000341307 DRP2Q13474 957 aa13.22□□□□□ -0.29
RTN3-203ENST00000341307 C6orf89Q6UWU4 347 aa13.22□□□□□ -0.29
RTN3-203ENST00000341307 SLC35F6Q8N357 371 aa13.22□□□□□ -0.29
RTN3-203ENST00000341307 AIDAQ96BJ3 306 aa13.22□□□□□ -0.29
RTN3-203ENST00000341307 EPAS1Q99814 870 aa13.22□□□□□ -0.29
RTN3-203ENST00000341307 MMTAG2Q9BU76 263 aaKnown RBP13.22□□□□□ -0.29
RTN3-203ENST00000341307 SELENOOQ9BVL4 669 aa13.22□□□□□ -0.29
RTN3-203ENST00000341307 ARMT1Q9H993 441 aa13.22□□□□□ -0.29
RTN3-203ENST00000341307 EBF2Q9HAK2 575 aa13.22□□□□□ -0.29
RTN3-203ENST00000341307 ANAPC4Q9UJX5 808 aa13.22□□□□□ -0.29
RTN3-203ENST00000341307 MINPP1Q9UNW1 487 aa13.22□□□□□ -0.29
RTN3-203ENST00000341307 ZSCAN9O15535 394 aaPredicted RBP13.21□□□□□ -0.29
RTN3-203ENST00000341307 KIF5CO60282 957 aa13.21□□□□□ -0.29
RTN3-203ENST00000341307 MBD4O95243 580 aa13.21□□□□□ -0.29
RTN3-203ENST00000341307 CTDNEP1O95476 244 aa13.21□□□□□ -0.29
RTN3-203ENST00000341307 PTGER2P43116 358 aa13.21□□□□□ -0.29
RTN3-203ENST00000341307 IFT88Q13099 833 aa13.21□□□□□ -0.29
RTN3-203ENST00000341307 NCAPH2Q6IBW4 605 aa13.21□□□□□ -0.29
RTN3-203ENST00000341307 SLC30A9Q6PML9 568 aa13.21□□□□□ -0.29
RTN3-203ENST00000341307 BRAPQ7Z569 592 aa13.21□□□□□ -0.29
RTN3-203ENST00000341307 TBC1D10CQ8IV04 446 aa13.21□□□□□ -0.29
RTN3-203ENST00000341307 MFN1Q8IWA4 741 aa13.21□□□□□ -0.29
RTN3-203ENST00000341307 PDILTQ8N807 584 aa13.21□□□□□ -0.29
RTN3-203ENST00000341307 MIGA1Q8NAN2 632 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms