RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 CCSER1Q9C0I3 900 aa16.41■□□□□ 0.22
TDP2-201ENST00000341060 STX8Q9UNK0 236 aa16.41■□□□□ 0.22
TDP2-201ENST00000341060 H7C1D1 291 aa16.4■□□□□ 0.22
TDP2-201ENST00000341060 LDHCP07864 332 aa16.4■□□□□ 0.22
TDP2-201ENST00000341060 GRIK5Q16478 980 aa16.4■□□□□ 0.22
TDP2-201ENST00000341060 INF2Q27J81 1249 aa16.4■□□□□ 0.22
TDP2-201ENST00000341060 SLC51AQ86UW1 340 aa16.4■□□□□ 0.22
TDP2-201ENST00000341060 TMTC1Q8IUR5 882 aa16.4■□□□□ 0.22
TDP2-201ENST00000341060 ADSSL1Q8N142 457 aa16.4■□□□□ 0.22
TDP2-201ENST00000341060 SLC44A5Q8NCS7 719 aa16.4■□□□□ 0.22
TDP2-201ENST00000341060 LZTS2Q9BRK4 669 aa16.4■□□□□ 0.22
TDP2-201ENST00000341060 RTFDC1Q9BY42 306 aaPredicted RBP16.4■□□□□ 0.22
TDP2-201ENST00000341060 VPS16Q9H269 839 aa16.4■□□□□ 0.22
TDP2-201ENST00000341060 TMEM60Q9H2L4 133 aa16.4■□□□□ 0.22
TDP2-201ENST00000341060 ZNF287Q9HBT7 754 aa16.4■□□□□ 0.22
TDP2-201ENST00000341060 TTF2Q9UNY4 1162 aaKnown RBP16.4■□□□□ 0.22
TDP2-201ENST00000341060 KIF5CO60282 957 aa16.4■□□□□ 0.22
TDP2-201ENST00000341060 SPZ1Q9BXG8 430 aa16.4■□□□□ 0.22
TDP2-201ENST00000341060 KBTBD4Q9NVX7 518 aa16.4■□□□□ 0.22
TDP2-201ENST00000341060 TAB2Q9NYJ8 693 aa16.4■□□□□ 0.22
TDP2-201ENST00000341060 UBA7P41226 1012 aa16.39■□□□□ 0.21
TDP2-201ENST00000341060 RABGGTAQ92696 567 aa16.39■□□□□ 0.21
TDP2-201ENST00000341060 NUP88Q99567 741 aaPredicted RBP16.39■□□□□ 0.21
TDP2-201ENST00000341060 ZMYND12Q9H0C1 365 aa16.39■□□□□ 0.21
TDP2-201ENST00000341060 MAPK8IP1Q9UQF2 711 aa16.39■□□□□ 0.21
TDP2-201ENST00000341060 A0A0U1RQJ8 604 aa16.39■□□□□ 0.21
TDP2-201ENST00000341060 PP2D1A8MPX8 630 aa16.39■□□□□ 0.21
TDP2-201ENST00000341060 KLRC4O43908 158 aa16.39■□□□□ 0.21
TDP2-201ENST00000341060 RHOBTB3O94955 611 aa16.39■□□□□ 0.21
TDP2-201ENST00000341060 RFC4P35249 363 aa16.39■□□□□ 0.21
TDP2-201ENST00000341060 ERVK-24P63145 666 aa16.39■□□□□ 0.21
TDP2-201ENST00000341060 TERF2Q15554 542 aa16.39■□□□□ 0.21
TDP2-201ENST00000341060 CYP26C1Q6V0L0 522 aa16.39■□□□□ 0.21
TDP2-201ENST00000341060 IRF2BP1Q8IU81 584 aa16.39■□□□□ 0.21
TDP2-201ENST00000341060 RASSF8Q8NHQ8 419 aa16.39■□□□□ 0.21
TDP2-201ENST00000341060 ATRIPQ8WXE1 791 aa16.39■□□□□ 0.21
TDP2-201ENST00000341060 UBR3Q6ZT12 1888 aa16.38■□□□□ 0.21
TDP2-201ENST00000341060 TRIM49BA6NDI0 452 aa16.38■□□□□ 0.21
TDP2-201ENST00000341060 KLRF2D3W0D1 207 aa16.38■□□□□ 0.21
TDP2-201ENST00000341060 ATP8B1O43520 1251 aa16.38■□□□□ 0.21
TDP2-201ENST00000341060 TEX35Q5T0J7 233 aa16.38■□□□□ 0.21
TDP2-201ENST00000341060 C16orf86Q6ZW13 317 aa16.38■□□□□ 0.21
TDP2-201ENST00000341060 MAPKAPK5Q8IW41 473 aa16.38■□□□□ 0.21
TDP2-201ENST00000341060 CNBD1Q8NA66 436 aa16.38■□□□□ 0.21
TDP2-201ENST00000341060 GOLGA1Q92805 767 aa16.38■□□□□ 0.21
TDP2-201ENST00000341060 AK8Q96MA6 479 aa16.38■□□□□ 0.21
TDP2-201ENST00000341060 CUEDC2Q9H467 287 aa16.38■□□□□ 0.21
TDP2-201ENST00000341060 MAGEF1Q9HAY2 307 aa16.38■□□□□ 0.21
TDP2-201ENST00000341060 ZHX1Q9UKY1 873 aaPredicted RBP16.38■□□□□ 0.21
TDP2-201ENST00000341060 RNF225M0QZC1 329 aaPredicted RBP16.37■□□□□ 0.21
TDP2-201ENST00000341060 PARP1P09874 1014 aaKnown RBP16.37■□□□□ 0.21
TDP2-201ENST00000341060 EEF1GP26641 437 aaKnown RBP16.37■□□□□ 0.21
TDP2-201ENST00000341060 GIMAP8Q8ND71 665 aaPredicted RBP16.37■□□□□ 0.21
TDP2-201ENST00000341060 FLT1P17948 1338 aa16.37■□□□□ 0.21
TDP2-201ENST00000341060 GOLGA8HP0CJ92 632 aa16.37■□□□□ 0.21
TDP2-201ENST00000341060 BTDP43251 543 aa16.37■□□□□ 0.21
TDP2-201ENST00000341060 UBXN1Q04323 297 aa16.37■□□□□ 0.21
TDP2-201ENST00000341060 STIM1Q13586 685 aa16.37■□□□□ 0.21
TDP2-201ENST00000341060 TUBB2AQ13885 445 aa16.37■□□□□ 0.21
TDP2-201ENST00000341060 ACRBPQ8NEB7 543 aa16.37■□□□□ 0.21
TDP2-201ENST00000341060 EYA3Q99504 573 aa16.37■□□□□ 0.21
TDP2-201ENST00000341060 TUBB2BQ9BVA1 445 aa16.37■□□□□ 0.21
TDP2-201ENST00000341060 EPC1Q9H2F5 836 aa16.37■□□□□ 0.21
TDP2-201ENST00000341060 THAP9Q9H5L6 903 aa16.37■□□□□ 0.21
TDP2-201ENST00000341060 SAP30BPQ9UHR5 308 aaKnown RBP16.37■□□□□ 0.21
TDP2-201ENST00000341060 MTMR7Q9Y216 660 aa16.37■□□□□ 0.21
TDP2-201ENST00000341060 GPR75-ASB3A0A0A6YYF3 556 aa16.36■□□□□ 0.21
TDP2-201ENST00000341060 PSMA7O14818 248 aa16.36■□□□□ 0.21
TDP2-201ENST00000341060 APBA3O96018 575 aa16.36■□□□□ 0.21
TDP2-201ENST00000341060 KRT9P35527 623 aa16.36■□□□□ 0.21
TDP2-201ENST00000341060 CDK8P49336 464 aa16.36■□□□□ 0.21
TDP2-201ENST00000341060 PMS1P54277 932 aaKnown RBP16.36■□□□□ 0.21
TDP2-201ENST00000341060 TRAPPC3LQ5T215 181 aa16.36■□□□□ 0.21
TDP2-201ENST00000341060 CC2D1AQ6P1N0 951 aaPredicted RBP16.36■□□□□ 0.21
TDP2-201ENST00000341060 KRT25Q7Z3Z0 450 aa16.36■□□□□ 0.21
TDP2-201ENST00000341060 CREBRFQ8IUR6 639 aa16.36■□□□□ 0.21
TDP2-201ENST00000341060 PROM2Q8N271 834 aa16.36■□□□□ 0.21
TDP2-201ENST00000341060 MYO1AQ9UBC5 1043 aa16.36■□□□□ 0.21
TDP2-201ENST00000341060 CDC23Q9UJX2 597 aa16.36■□□□□ 0.21
TDP2-201ENST00000341060 A0A1W2PQC6 194 aa16.36■□□□□ 0.21
TDP2-201ENST00000341060 LGALS16A8MUM7 142 aa16.36■□□□□ 0.21
TDP2-201ENST00000341060 PLA2G4AP47712 749 aa16.36■□□□□ 0.21
TDP2-201ENST00000341060 NAPAP54920 295 aa16.36■□□□□ 0.21
TDP2-201ENST00000341060 FAM193AP78312 1265 aa16.36■□□□□ 0.21
TDP2-201ENST00000341060 ZNF569Q5MCW4 686 aa16.36■□□□□ 0.21
TDP2-201ENST00000341060 SRGAP1Q7Z6B7 1085 aa16.36■□□□□ 0.21
TDP2-201ENST00000341060 NEDD1Q8NHV4 660 aa16.36■□□□□ 0.21
TDP2-201ENST00000341060 LRRC15Q8TF66 581 aa16.36■□□□□ 0.21
TDP2-201ENST00000341060 GPR101Q96P66 508 aaPredicted RBP16.36■□□□□ 0.21
TDP2-201ENST00000341060 CD209Q9NNX6 404 aa16.36■□□□□ 0.21
TDP2-201ENST00000341060 ST7Q9NRC1 585 aa16.36■□□□□ 0.21
TDP2-201ENST00000341060 LTBP1Q14766 1721 aa16.35■□□□□ 0.21
TDP2-201ENST00000341060 CTAGE9A4FU28 777 aa16.35■□□□□ 0.21
TDP2-201ENST00000341060 OR52Z1P0C646 297 aa16.35■□□□□ 0.21
TDP2-201ENST00000341060 IL1R1P14778 569 aa16.35■□□□□ 0.21
TDP2-201ENST00000341060 SMARCA1P28370 1054 aa16.35■□□□□ 0.21
TDP2-201ENST00000341060 GNA11P29992 359 aa16.35■□□□□ 0.21
TDP2-201ENST00000341060 CHMP4BP1P59074 171 aa16.35■□□□□ 0.21
TDP2-201ENST00000341060 NONOQ15233 471 aaKnown RBP eCLIP16.35■□□□□ 0.21
TDP2-201ENST00000341060 MB21D1Q8N884 522 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms