RNA–Protein interactions for RNA: ENST00000340513.4

TPX2-202, Transcript of TPX2, microtubule nucleation factor, humanhuman

TSL 1 (best) BASIC

Gene TPX2, Length 3,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPX2-202ENST00000340513 UIMC1Q96RL1 719 aa13.17□□□□□ -0.3
TPX2-202ENST00000340513 SYNCQ9H7C4 482 aa13.17□□□□□ -0.3
TPX2-202ENST00000340513 GUCA1BQ9UMX6 200 aa13.17□□□□□ -0.3
TPX2-202ENST00000340513 MLH3Q9UHC1 1453 aa13.16□□□□□ -0.3
TPX2-202ENST00000340513 GMNCA6NCL1 334 aa13.16□□□□□ -0.3
TPX2-202ENST00000340513 TTMPQ5BVD1 217 aa13.16□□□□□ -0.3
TPX2-202ENST00000340513 RETREG1Q9H6L5 497 aa13.16□□□□□ -0.3
TPX2-202ENST00000340513 BOLA2-SMG1P6H3BVE0 249 aa13.16□□□□□ -0.3
TPX2-202ENST00000340513 MDH1P40925 334 aaKnown RBP13.16□□□□□ -0.3
TPX2-202ENST00000340513 LRP8Q14114 963 aa13.16□□□□□ -0.3
TPX2-202ENST00000340513 MAP7Q14244 749 aa13.16□□□□□ -0.3
TPX2-202ENST00000340513 WDR93Q6P2C0 686 aa13.16□□□□□ -0.3
TPX2-202ENST00000340513 LEMD3Q9Y2U8 911 aa13.16□□□□□ -0.3
TPX2-202ENST00000340513 TDRKHQ9Y2W6 561 aaKnown RBP13.16□□□□□ -0.3
TPX2-202ENST00000340513 PHF20L1A8MW92 1017 aa13.15□□□□□ -0.3
TPX2-202ENST00000340513 VPS41P49754 854 aa13.15□□□□□ -0.3
TPX2-202ENST00000340513 SAFB2Q14151 953 aaKnown RBP eCLIP13.15□□□□□ -0.3
TPX2-202ENST00000340513 RAB11FIP4Q86YS3 637 aa13.15□□□□□ -0.3
TPX2-202ENST00000340513 SLC17A8Q8NDX2 589 aa13.15□□□□□ -0.3
TPX2-202ENST00000340513 USP11P51784 963 aa13.15□□□□□ -0.3
TPX2-202ENST00000340513 RAD23BP54727 409 aa13.15□□□□□ -0.3
TPX2-202ENST00000340513 SLC4A10Q6U841 1118 aa13.15□□□□□ -0.3
TPX2-202ENST00000340513 SCUBE1Q8IWY4 988 aa13.15□□□□□ -0.3
TPX2-202ENST00000340513 CLASRPQ8N2M8 674 aaKnown RBP13.15□□□□□ -0.3
TPX2-202ENST00000340513 ANKS4BQ8N8V4 417 aa13.15□□□□□ -0.3
TPX2-202ENST00000340513 IL25Q9H293 177 aa13.15□□□□□ -0.3
TPX2-202ENST00000340513 TUBA8Q9NY65 449 aaPredicted RBP13.15□□□□□ -0.3
TPX2-202ENST00000340513 CARD8Q9Y2G2 431 aa13.15□□□□□ -0.3
TPX2-202ENST00000340513 SNX14Q9Y5W7 946 aa13.15□□□□□ -0.3
TPX2-202ENST00000340513 POTEFA5A3E0 1075 aa13.15□□□□□ -0.3
TPX2-202ENST00000340513 A8MUI8 341 aa13.15□□□□□ -0.3
TPX2-202ENST00000340513 NLRP5P59047 1200 aa13.15□□□□□ -0.3
TPX2-202ENST00000340513 ZFYVE27Q5T4F4 411 aa13.15□□□□□ -0.3
TPX2-202ENST00000340513 RBM43Q6ZSC3 357 aaKnown RBP13.15□□□□□ -0.3
TPX2-202ENST00000340513 DAAM2Q86T65 1068 aa13.15□□□□□ -0.3
TPX2-202ENST00000340513 ZNF554Q86TJ5 538 aa13.15□□□□□ -0.3
TPX2-202ENST00000340513 CCNJLQ8IV13 435 aa13.15□□□□□ -0.3
TPX2-202ENST00000340513 TSPYL6Q8N831 410 aa13.15□□□□□ -0.3
TPX2-202ENST00000340513 CHPF2Q9P2E5 772 aa13.15□□□□□ -0.3
TPX2-202ENST00000340513 HTR3EA5X5Y0 456 aa13.14□□□□□ -0.31
TPX2-202ENST00000340513 CCDC160A6NGH7 325 aa13.14□□□□□ -0.31
TPX2-202ENST00000340513 BDNFP23560 247 aa13.14□□□□□ -0.31
TPX2-202ENST00000340513 TMPOP42166 694 aaKnown RBP13.14□□□□□ -0.31
TPX2-202ENST00000340513 UNC5CLQ8IV45 518 aa13.14□□□□□ -0.31
TPX2-202ENST00000340513 RNF10Q8N5U6 811 aaKnown RBP13.14□□□□□ -0.31
TPX2-202ENST00000340513 CCDC87Q9NVE4 849 aa13.14□□□□□ -0.31
TPX2-202ENST00000340513 ETNK2Q9NVF9 386 aa13.14□□□□□ -0.31
TPX2-202ENST00000340513 PAG1Q9NWQ8 432 aa13.14□□□□□ -0.31
TPX2-202ENST00000340513 SSX2IPQ9Y2D8 614 aa13.14□□□□□ -0.31
TPX2-202ENST00000340513 UHRF1BP1Q6BDS2 1440 aa13.14□□□□□ -0.31
TPX2-202ENST00000340513 STX10O60499 249 aa13.14□□□□□ -0.31
TPX2-202ENST00000340513 PLOD1Q02809 727 aaPredicted RBP13.14□□□□□ -0.31
TPX2-202ENST00000340513 QPCTQ16769 361 aa13.14□□□□□ -0.31
TPX2-202ENST00000340513 PABPC1LQ4VXU2 614 aaKnown RBP13.14□□□□□ -0.31
TPX2-202ENST00000340513 DPY19L2Q6NUT2 758 aa13.14□□□□□ -0.31
TPX2-202ENST00000340513 USP6NLQ92738 828 aa13.14□□□□□ -0.31
TPX2-202ENST00000340513 CNKSR1Q969H4 720 aa13.14□□□□□ -0.31
TPX2-202ENST00000340513 KLHL29Q96CT2 875 aa13.14□□□□□ -0.31
TPX2-202ENST00000340513 RPGRIP1Q96KN7 1286 aa13.14□□□□□ -0.31
TPX2-202ENST00000340513 CCT7Q99832 543 aa13.14□□□□□ -0.31
TPX2-202ENST00000340513 LBHD1Q9BQE6 289 aaPredicted RBP13.14□□□□□ -0.31
TPX2-202ENST00000340513 CARD14Q9BXL6 1004 aa13.14□□□□□ -0.31
TPX2-202ENST00000340513 EFR3BQ9Y2G0 817 aa13.14□□□□□ -0.31
TPX2-202ENST00000340513 A2MP01023 1474 aa13.14□□□□□ -0.31
TPX2-202ENST00000340513 INO80Q9ULG1 1556 aaPredicted RBP13.14□□□□□ -0.31
TPX2-202ENST00000340513 HSPA8P11142 646 aaKnown RBP13.14□□□□□ -0.31
TPX2-202ENST00000340513 TMOD1P28289 359 aa13.14□□□□□ -0.31
TPX2-202ENST00000340513 SKOR1P84550 965 aa13.14□□□□□ -0.31
TPX2-202ENST00000340513 PDE1CQ14123 709 aaPredicted RBP13.14□□□□□ -0.31
TPX2-202ENST00000340513 NEK10Q6ZWH5 1172 aa13.14□□□□□ -0.31
TPX2-202ENST00000340513 PPFIBP1Q86W92 1011 aa13.14□□□□□ -0.31
TPX2-202ENST00000340513 DEPTORQ8TB45 409 aa13.14□□□□□ -0.31
TPX2-202ENST00000340513 L3MBTL3Q96JM7 780 aaPredicted RBP13.14□□□□□ -0.31
TPX2-202ENST00000340513 SENP3Q9H4L4 574 aaPredicted RBP13.14□□□□□ -0.31
TPX2-202ENST00000340513 HEY1Q9Y5J3 304 aa13.14□□□□□ -0.31
TPX2-202ENST00000340513 KDM5DQ9BY66 1539 aa13.14□□□□□ -0.31
TPX2-202ENST00000340513 PMS2P54278 862 aa13.13□□□□□ -0.31
TPX2-202ENST00000340513 CCNI2Q6ZMN8 369 aaPredicted RBP13.13□□□□□ -0.31
TPX2-202ENST00000340513 PPFIBP2Q8ND30 876 aa13.13□□□□□ -0.31
TPX2-202ENST00000340513 CCDC43Q96MW1 224 aaKnown RBP13.13□□□□□ -0.31
TPX2-202ENST00000340513 MADDQ8WXG6 1647 aa13.13□□□□□ -0.31
TPX2-202ENST00000340513 FYB1O15117 783 aa13.13□□□□□ -0.31
TPX2-202ENST00000340513 SLC3A2P08195 630 aaKnown RBP13.13□□□□□ -0.31
TPX2-202ENST00000340513 SH3BGRP55822 239 aaPredicted RBP13.13□□□□□ -0.31
TPX2-202ENST00000340513 KCNJ2P63252 427 aa13.13□□□□□ -0.31
TPX2-202ENST00000340513 TBL3Q12788 808 aaKnown RBP13.13□□□□□ -0.31
TPX2-202ENST00000340513 INAQ16352 499 aa13.13□□□□□ -0.31
TPX2-202ENST00000340513 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.13□□□□□ -0.31
TPX2-202ENST00000340513 SLC2A7Q6PXP3 512 aa13.13□□□□□ -0.31
TPX2-202ENST00000340513 CEP70Q8NHQ1 597 aa13.13□□□□□ -0.31
TPX2-202ENST00000340513 IFT81Q8WYA0 676 aa13.13□□□□□ -0.31
TPX2-202ENST00000340513 CASP10Q92851 521 aa13.13□□□□□ -0.31
TPX2-202ENST00000340513 AIDAQ96BJ3 306 aa13.13□□□□□ -0.31
TPX2-202ENST00000340513 DDX23Q9BUQ8 820 aaKnown RBP13.13□□□□□ -0.31
TPX2-202ENST00000340513 DIS3Q9Y2L1 958 aaKnown RBP13.13□□□□□ -0.31
TPX2-202ENST00000340513 LUC7L2Q9Y383 392 aaKnown RBP13.13□□□□□ -0.31
TPX2-202ENST00000340513 UBN2Q6ZU65 1347 aa13.13□□□□□ -0.31
TPX2-202ENST00000340513 TCOF1Q13428 1488 aaKnown RBP13.13□□□□□ -0.31
TPX2-202ENST00000340513 TARSL2A2RTX5 802 aaKnown RBP13.13□□□□□ -0.31
TPX2-202ENST00000340513 VIMP08670 466 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms