RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 ERLIN1O75477 346 aa13.44□□□□□ -0.26
CCDC144CP-201ENST00000340196 RPN1P04843 607 aaKnown RBP13.44□□□□□ -0.26
CCDC144CP-201ENST00000340196 PLEKP08567 350 aaPredicted RBP13.44□□□□□ -0.26
CCDC144CP-201ENST00000340196 PARP1P09874 1014 aaKnown RBP13.44□□□□□ -0.26
CCDC144CP-201ENST00000340196 NLRP5P59047 1200 aa13.44□□□□□ -0.26
CCDC144CP-201ENST00000340196 ATP2C1P98194 919 aaPredicted RBP13.44□□□□□ -0.26
CCDC144CP-201ENST00000340196 C2orf54Q08AI8 447 aa13.44□□□□□ -0.26
CCDC144CP-201ENST00000340196 CCDC122Q5T0U0 273 aa13.44□□□□□ -0.26
CCDC144CP-201ENST00000340196 TTC19Q6DKK2 380 aaPredicted RBP13.44□□□□□ -0.26
CCDC144CP-201ENST00000340196 LRRC31Q6UY01 552 aa13.44□□□□□ -0.26
CCDC144CP-201ENST00000340196 C3orf67Q6ZVT6 689 aa13.44□□□□□ -0.26
CCDC144CP-201ENST00000340196 RASSF8Q8NHQ8 419 aa13.44□□□□□ -0.26
CCDC144CP-201ENST00000340196 LIMA1Q9UHB6 759 aaKnown RBP13.44□□□□□ -0.26
CCDC144CP-201ENST00000340196 BAZ2AQ9UIF9 1905 aaKnown RBP13.44□□□□□ -0.26
CCDC144CP-201ENST00000340196 AFF2P51816 1311 aa13.44□□□□□ -0.26
CCDC144CP-201ENST00000340196 CNTNAP5Q8WYK1 1306 aa13.44□□□□□ -0.26
CCDC144CP-201ENST00000340196 SYF2O95926 243 aaKnown RBP13.44□□□□□ -0.26
CCDC144CP-201ENST00000340196 CRKLP46109 303 aaKnown RBP13.44□□□□□ -0.26
CCDC144CP-201ENST00000340196 TYW1BQ6NUM6 668 aa13.44□□□□□ -0.26
CCDC144CP-201ENST00000340196 CATIPQ7Z7H3 387 aa13.44□□□□□ -0.26
CCDC144CP-201ENST00000340196 MYH6P13533 1939 aa13.43□□□□□ -0.26
CCDC144CP-201ENST00000340196 NID2Q14112 1375 aa13.43□□□□□ -0.26
CCDC144CP-201ENST00000340196 COL1A1P02452 1464 aaPredicted RBP13.43□□□□□ -0.26
CCDC144CP-201ENST00000340196 CLGNO14967 610 aa13.43□□□□□ -0.26
CCDC144CP-201ENST00000340196 IQUBQ8NA54 791 aa13.43□□□□□ -0.26
CCDC144CP-201ENST00000340196 HDAC7Q8WUI4 952 aa13.43□□□□□ -0.26
CCDC144CP-201ENST00000340196 PNPLA7Q6ZV29 1317 aa13.43□□□□□ -0.26
CCDC144CP-201ENST00000340196 XBP1P17861 261 aa13.43□□□□□ -0.26
CCDC144CP-201ENST00000340196 MATR3P43243 847 aaKnown RBP eCLIP13.43□□□□□ -0.26
CCDC144CP-201ENST00000340196 HSP90B2PQ58FF3 399 aa13.43□□□□□ -0.26
CCDC144CP-201ENST00000340196 MEX3CQ5U5Q3 659 aaKnown RBP13.43□□□□□ -0.26
CCDC144CP-201ENST00000340196 CCDC24Q8N4L8 307 aa13.43□□□□□ -0.26
CCDC144CP-201ENST00000340196 RIOK1Q9BRS2 568 aaKnown RBP13.43□□□□□ -0.26
CCDC144CP-201ENST00000340196 TMEM60Q9H2L4 133 aa13.43□□□□□ -0.26
CCDC144CP-201ENST00000340196 BTAF1O14981 1849 aa13.42□□□□□ -0.26
CCDC144CP-201ENST00000340196 SBF2Q86WG5 1849 aa13.42□□□□□ -0.26
CCDC144CP-201ENST00000340196 RGL2O15211 777 aa13.42□□□□□ -0.26
CCDC144CP-201ENST00000340196 PRPF3O43395 683 aaKnown RBP13.42□□□□□ -0.26
CCDC144CP-201ENST00000340196 NAALADL2Q58DX5 795 aa13.42□□□□□ -0.26
CCDC144CP-201ENST00000340196 TMTC3Q6ZXV5 915 aa13.42□□□□□ -0.26
CCDC144CP-201ENST00000340196 TRAPPC11Q7Z392 1133 aa13.42□□□□□ -0.26
CCDC144CP-201ENST00000340196 FERMT2Q96AC1 680 aa13.42□□□□□ -0.26
CCDC144CP-201ENST00000340196 RNF41Q9H4P4 317 aaPredicted RBP13.42□□□□□ -0.26
CCDC144CP-201ENST00000340196 RWDD2AQ9UIY3 292 aa13.42□□□□□ -0.26
CCDC144CP-201ENST00000340196 CXCR5P32302 372 aa13.42□□□□□ -0.26
CCDC144CP-201ENST00000340196 STAT6P42226 847 aa13.42□□□□□ -0.26
CCDC144CP-201ENST00000340196 ATP2B2Q01814 1243 aa13.42□□□□□ -0.26
CCDC144CP-201ENST00000340196 WHAMMP3Q1A5X7 153 aa13.42□□□□□ -0.26
CCDC144CP-201ENST00000340196 DNAJC21Q5F1R6 531 aaKnown RBP13.42□□□□□ -0.26
CCDC144CP-201ENST00000340196 ZNF34Q8IZ26 560 aa13.42□□□□□ -0.26
CCDC144CP-201ENST00000340196 STAG2Q8N3U4 1231 aa13.42□□□□□ -0.26
CCDC144CP-201ENST00000340196 RRP36Q96EU6 259 aaKnown RBP13.42□□□□□ -0.26
CCDC144CP-201ENST00000340196 TRPC5Q9UL62 973 aaPredicted RBP13.42□□□□□ -0.26
CCDC144CP-201ENST00000340196 ITIH6Q6UXX5 1313 aa13.42□□□□□ -0.26
CCDC144CP-201ENST00000340196 RASSF10A6NK89 507 aa13.41□□□□□ -0.26
CCDC144CP-201ENST00000340196 EIF3JO75822 258 aaKnown RBP13.41□□□□□ -0.26
CCDC144CP-201ENST00000340196 FECHP22830 423 aa13.41□□□□□ -0.26
CCDC144CP-201ENST00000340196 GGCXP38435 758 aa13.41□□□□□ -0.26
CCDC144CP-201ENST00000340196 CTR9Q6PD62 1173 aa13.41□□□□□ -0.26
CCDC144CP-201ENST00000340196 MB21D1Q8N884 522 aa13.41□□□□□ -0.26
CCDC144CP-201ENST00000340196 TRIM47Q96LD4 638 aa13.41□□□□□ -0.26
CCDC144CP-201ENST00000340196 KCNQ4P56696 695 aa13.41□□□□□ -0.26
CCDC144CP-201ENST00000340196 SLC7A5Q01650 507 aa13.41□□□□□ -0.26
CCDC144CP-201ENST00000340196 ZNF658Q5TYW1 1059 aaPredicted RBP13.41□□□□□ -0.26
CCDC144CP-201ENST00000340196 TMTC2Q8N394 836 aa13.41□□□□□ -0.26
CCDC144CP-201ENST00000340196 PSD3Q9NYI0 1048 aa13.41□□□□□ -0.26
CCDC144CP-201ENST00000340196 LUC7L2Q9Y383 392 aaKnown RBP13.41□□□□□ -0.26
CCDC144CP-201ENST00000340196 MYH3P11055 1940 aa13.41□□□□□ -0.26
CCDC144CP-201ENST00000340196 TIAM2Q8IVF5 1701 aa13.41□□□□□ -0.26
CCDC144CP-201ENST00000340196 RTL9Q8NET4 1388 aa13.4□□□□□ -0.26
CCDC144CP-201ENST00000340196 LRRC10BA6NIK2 292 aa13.4□□□□□ -0.26
CCDC144CP-201ENST00000340196 GTPBP6O43824 516 aaPredicted RBP13.4□□□□□ -0.26
CCDC144CP-201ENST00000340196 DNA2P51530 1060 aa13.4□□□□□ -0.26
CCDC144CP-201ENST00000340196 USP14P54578 494 aa13.4□□□□□ -0.26
CCDC144CP-201ENST00000340196 KIAA1328Q86T90 577 aa13.4□□□□□ -0.26
CCDC144CP-201ENST00000340196 CCDC148Q8NFR7 591 aa13.4□□□□□ -0.26
CCDC144CP-201ENST00000340196 CAGE1Q8TC20 777 aa13.4□□□□□ -0.26
CCDC144CP-201ENST00000340196 JAKMIP2Q96AA8 810 aa13.4□□□□□ -0.26
CCDC144CP-201ENST00000340196 PCMTD1Q96MG8 357 aaPredicted RBP13.4□□□□□ -0.26
CCDC144CP-201ENST00000340196 JADE2Q9NQC1 790 aa13.4□□□□□ -0.26
CCDC144CP-201ENST00000340196 HPCAL4Q9UM19 191 aa13.4□□□□□ -0.26
CCDC144CP-201ENST00000340196 ZC3H4Q9UPT8 1303 aaKnown RBP13.4□□□□□ -0.26
CCDC144CP-201ENST00000340196 ZPR1O75312 459 aa13.4□□□□□ -0.26
CCDC144CP-201ENST00000340196 GNAT2P19087 354 aa13.4□□□□□ -0.26
CCDC144CP-201ENST00000340196 ICE2Q659A1 982 aa13.4□□□□□ -0.26
CCDC144CP-201ENST00000340196 PACS2Q86VP3 889 aa13.4□□□□□ -0.26
CCDC144CP-201ENST00000340196 ANKRD13CQ8N6S4 541 aa13.4□□□□□ -0.26
CCDC144CP-201ENST00000340196 OR8K1Q8NGG5 319 aa13.4□□□□□ -0.26
CCDC144CP-201ENST00000340196 BRMS1Q9HCU9 246 aa13.4□□□□□ -0.26
CCDC144CP-201ENST00000340196 SAR1BQ9Y6B6 198 aa13.4□□□□□ -0.26
CCDC144CP-201ENST00000340196 ZNF263O14978 683 aa13.4□□□□□ -0.27
CCDC144CP-201ENST00000340196 EPHB6O15197 1021 aa13.4□□□□□ -0.27
CCDC144CP-201ENST00000340196 FCER1AP12319 257 aa13.4□□□□□ -0.27
CCDC144CP-201ENST00000340196 SCG2P13521 617 aa13.4□□□□□ -0.27
CCDC144CP-201ENST00000340196 INF2Q27J81 1249 aa13.4□□□□□ -0.27
CCDC144CP-201ENST00000340196 IQCA1Q86XH1 822 aa13.4□□□□□ -0.27
CCDC144CP-201ENST00000340196 MLXIPQ9HAP2 919 aa13.4□□□□□ -0.27
CCDC144CP-201ENST00000340196 CWC15Q9P013 229 aaKnown RBP13.4□□□□□ -0.27
CCDC144CP-201ENST00000340196 EIF3CLB5ME19 914 aaKnown RBP13.39□□□□□ -0.27
CCDC144CP-201ENST00000340196 TRIM21P19474 475 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms