RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 PKN1Q16512 942 aa17.03■□□□□ 0.32
CSRP1-201ENST00000340006 PFKFB3Q16875 520 aaPredicted RBP17.03■□□□□ 0.32
CSRP1-201ENST00000340006 QRICH1Q2TAL8 776 aa17.03■□□□□ 0.32
CSRP1-201ENST00000340006 ANKRD23Q86SG2 305 aa17.03■□□□□ 0.32
CSRP1-201ENST00000340006 ATG4CQ96DT6 458 aa17.03■□□□□ 0.32
CSRP1-201ENST00000340006 PTPN18Q99952 460 aa17.03■□□□□ 0.32
CSRP1-201ENST00000340006 LOC285556D6RIA3 1793 aa17.03■□□□□ 0.32
CSRP1-201ENST00000340006 H3BQV1 296 aa17.02■□□□□ 0.32
CSRP1-201ENST00000340006 VWA5AO00534 786 aa17.02■□□□□ 0.32
CSRP1-201ENST00000340006 FDX1P10109 184 aa17.02■□□□□ 0.32
CSRP1-201ENST00000340006 KIF23Q02241 960 aaPredicted RBP17.02■□□□□ 0.32
CSRP1-201ENST00000340006 SREBF2Q12772 1141 aa17.02■□□□□ 0.32
CSRP1-201ENST00000340006 NOGQ13253 232 aa17.02■□□□□ 0.32
CSRP1-201ENST00000340006 IFFO2Q5TF58 517 aa17.02■□□□□ 0.32
CSRP1-201ENST00000340006 FBXO11Q86XK2 927 aa17.02■□□□□ 0.32
CSRP1-201ENST00000340006 GPKOWQ92917 476 aaPredicted RBP eCLIP17.02■□□□□ 0.32
CSRP1-201ENST00000340006 COA7Q96BR5 231 aa17.02■□□□□ 0.32
CSRP1-201ENST00000340006 C8orf76Q96K31 380 aa17.02■□□□□ 0.32
CSRP1-201ENST00000340006 PLS1Q14651 629 aa17.02■□□□□ 0.31
CSRP1-201ENST00000340006 USH1GQ495M9 461 aa17.02■□□□□ 0.31
CSRP1-201ENST00000340006 FAM43AQ8N2R8 423 aa17.02■□□□□ 0.31
CSRP1-201ENST00000340006 SMCR8Q8TEV9 937 aaPredicted RBP17.02■□□□□ 0.31
CSRP1-201ENST00000340006 MTMR8Q96EF0 704 aa17.02■□□□□ 0.31
CSRP1-201ENST00000340006 AMNQ9BXJ7 453 aa17.02■□□□□ 0.31
CSRP1-201ENST00000340006 RANBP17Q9H2T7 1088 aaKnown RBP17.02■□□□□ 0.31
CSRP1-201ENST00000340006 PCDHA1Q9Y5I3 950 aa17.02■□□□□ 0.31
CSRP1-201ENST00000340006 TESPA1A2RU30 521 aaPredicted RBP17.01■□□□□ 0.31
CSRP1-201ENST00000340006 AOC2O75106 756 aa17.01■□□□□ 0.31
CSRP1-201ENST00000340006 CYP2C8P10632 490 aa17.01■□□□□ 0.31
CSRP1-201ENST00000340006 HERVK_113P62684 666 aa17.01■□□□□ 0.31
CSRP1-201ENST00000340006 GUCY1B3Q02153 619 aa17.01■□□□□ 0.31
CSRP1-201ENST00000340006 ZIC5Q96T25 663 aa17.01■□□□□ 0.31
CSRP1-201ENST00000340006 SLC38A10Q9HBR0 1119 aa17.01■□□□□ 0.31
CSRP1-201ENST00000340006 RAVER2Q9HCJ3 691 aaKnown RBP17.01■□□□□ 0.31
CSRP1-201ENST00000340006 VPS54Q9P1Q0 977 aa17.01■□□□□ 0.31
CSRP1-201ENST00000340006 SLC45A1Q9Y2W3 748 aa17.01■□□□□ 0.31
CSRP1-201ENST00000340006 SPDYE16A6NNV3 312 aaPredicted RBP17■□□□□ 0.31
CSRP1-201ENST00000340006 TRAF1Q13077 416 aa17■□□□□ 0.31
CSRP1-201ENST00000340006 PAGR1Q9BTK6 254 aa17■□□□□ 0.31
CSRP1-201ENST00000340006 GJB4Q9NTQ9 266 aa17■□□□□ 0.31
CSRP1-201ENST00000340006 MYPNQ86TC9 1320 aa17■□□□□ 0.31
CSRP1-201ENST00000340006 SYT1P21579 422 aa17■□□□□ 0.31
CSRP1-201ENST00000340006 NAPAP54920 295 aa17■□□□□ 0.31
CSRP1-201ENST00000340006 NLRP5P59047 1200 aa17■□□□□ 0.31
CSRP1-201ENST00000340006 C1QTNF8P60827 252 aa17■□□□□ 0.31
CSRP1-201ENST00000340006 WWC2Q6AWC2 1192 aa17■□□□□ 0.31
CSRP1-201ENST00000340006 IFNL1Q8IU54 200 aa17■□□□□ 0.31
CSRP1-201ENST00000340006 AGBL1Q96MI9 1066 aa17■□□□□ 0.31
CSRP1-201ENST00000340006 BARHL2Q9NY43 387 aa17■□□□□ 0.31
CSRP1-201ENST00000340006 CCPG1Q9ULG6 757 aa17■□□□□ 0.31
CSRP1-201ENST00000340006 ADAMTS5Q9UNA0 930 aa17■□□□□ 0.31
CSRP1-201ENST00000340006 WDR33Q9C0J8 1336 aaKnown RBP17■□□□□ 0.31
CSRP1-201ENST00000340006 PARP14Q460N5 1801 aa16.99■□□□□ 0.31
CSRP1-201ENST00000340006 VPS37CA5D8V6 355 aaPredicted RBP16.99■□□□□ 0.31
CSRP1-201ENST00000340006 TM4SF4P48230 202 aa16.99■□□□□ 0.31
CSRP1-201ENST00000340006 CCDC12Q8WUD4 166 aaPredicted RBP16.99■□□□□ 0.31
CSRP1-201ENST00000340006 KCNJ14Q9UNX9 436 aa16.99■□□□□ 0.31
CSRP1-201ENST00000340006 SMCHD1A6NHR9 2005 aa16.99■□□□□ 0.31
CSRP1-201ENST00000340006 COL11A1P12107 1806 aaPredicted RBP16.99■□□□□ 0.31
CSRP1-201ENST00000340006 RLFQ13129 1914 aa16.99■□□□□ 0.31
CSRP1-201ENST00000340006 IGF2BP3O00425 579 aaKnown RBP eCLIP16.98■□□□□ 0.31
CSRP1-201ENST00000340006 STX6O43752 255 aa16.98■□□□□ 0.31
CSRP1-201ENST00000340006 PPP1R11O60927 126 aaPredicted RBP16.98■□□□□ 0.31
CSRP1-201ENST00000340006 ICAM1P05362 532 aa16.98■□□□□ 0.31
CSRP1-201ENST00000340006 TMEM132BQ14DG7 1078 aa16.98■□□□□ 0.31
CSRP1-201ENST00000340006 MCTP1Q6DN14 999 aa16.98■□□□□ 0.31
CSRP1-201ENST00000340006 MB21D1Q8N884 522 aa16.98■□□□□ 0.31
CSRP1-201ENST00000340006 SH3GLB2Q9NR46 395 aa16.98■□□□□ 0.31
CSRP1-201ENST00000340006 SMCO2A6NFE2 343 aa16.98■□□□□ 0.31
CSRP1-201ENST00000340006 ALAS1P13196 640 aa16.98■□□□□ 0.31
CSRP1-201ENST00000340006 STAT3P40763 770 aa16.98■□□□□ 0.31
CSRP1-201ENST00000340006 VEGFBP49765 207 aa16.98■□□□□ 0.31
CSRP1-201ENST00000340006 SAFBQ15424 915 aaKnown RBP eCLIP16.98■□□□□ 0.31
CSRP1-201ENST00000340006 TAF1CQ15572 869 aaPredicted RBP16.98■□□□□ 0.31
CSRP1-201ENST00000340006 KRT40Q6A162 431 aa16.98■□□□□ 0.31
CSRP1-201ENST00000340006 FBXO18Q8NFZ0 1043 aa16.98■□□□□ 0.31
CSRP1-201ENST00000340006 PARK7Q99497 189 aaKnown RBP16.98■□□□□ 0.31
CSRP1-201ENST00000340006 hCG_1984214I3L0E3 225 aa16.97■□□□□ 0.31
CSRP1-201ENST00000340006 STXBP3O00186 592 aa16.97■□□□□ 0.31
CSRP1-201ENST00000340006 PDIA4P13667 645 aaKnown RBP16.97■□□□□ 0.31
CSRP1-201ENST00000340006 NUCB2P80303 420 aa16.97■□□□□ 0.31
CSRP1-201ENST00000340006 GNL2Q13823 731 aaKnown RBP16.97■□□□□ 0.31
CSRP1-201ENST00000340006 PKP1Q13835 747 aa16.97■□□□□ 0.31
CSRP1-201ENST00000340006 FOXD4L5Q5VV16 416 aaPredicted RBP16.97■□□□□ 0.31
CSRP1-201ENST00000340006 SNRNP48Q6IEG0 339 aaKnown RBP16.97■□□□□ 0.31
CSRP1-201ENST00000340006 LBX2Q6XYB7 198 aa16.97■□□□□ 0.31
CSRP1-201ENST00000340006 REM2Q8IYK8 340 aaPredicted RBP16.97■□□□□ 0.31
CSRP1-201ENST00000340006 ZNF713Q8N859 430 aaPredicted RBP16.97■□□□□ 0.31
CSRP1-201ENST00000340006 CCDC148Q8NFR7 591 aa16.97■□□□□ 0.31
CSRP1-201ENST00000340006 FOXD4L4Q8WXT5 416 aaPredicted RBP16.97■□□□□ 0.31
CSRP1-201ENST00000340006 HOMER2Q9NSB8 354 aa16.97■□□□□ 0.31
CSRP1-201ENST00000340006 PNMA2Q9UL42 364 aa16.97■□□□□ 0.31
CSRP1-201ENST00000340006 PCNTO95613 3336 aa16.97■□□□□ 0.31
CSRP1-201ENST00000340006 PEX10O60683 326 aa16.97■□□□□ 0.31
CSRP1-201ENST00000340006 HSPA6P17066 643 aa16.97■□□□□ 0.31
CSRP1-201ENST00000340006 C6orf50Q9HD87 102 aa16.97■□□□□ 0.31
CSRP1-201ENST00000340006 BTBD7Q9P203 1132 aa16.97■□□□□ 0.31
CSRP1-201ENST00000340006 RBPJLQ9UBG7 517 aa16.97■□□□□ 0.31
CSRP1-201ENST00000340006 MRPL11Q9Y3B7 192 aaKnown RBP16.97■□□□□ 0.31
CSRP1-201ENST00000340006 RABGAP1Q9Y3P9 1069 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms