RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 TRPC1P48995 793 aa13.99□□□□□ -0.17
USP47-202ENST00000339865 ASZ1Q8WWH4 475 aa13.99□□□□□ -0.17
USP47-202ENST00000339865 SUPT3HO75486 399 aa13.99□□□□□ -0.17
USP47-202ENST00000339865 TADA3O75528 432 aa13.99□□□□□ -0.17
USP47-202ENST00000339865 YWHAGP61981 247 aaKnown RBP eCLIP13.99□□□□□ -0.17
USP47-202ENST00000339865 RAD50Q92878 1312 aa13.99□□□□□ -0.17
USP47-202ENST00000339865 NBPF20Q3BBV1 942 aa13.99□□□□□ -0.17
USP47-202ENST00000339865 GNPTABQ3T906 1256 aa13.99□□□□□ -0.17
USP47-202ENST00000339865 PIK3AP1Q6ZUJ8 805 aa13.99□□□□□ -0.17
USP47-202ENST00000339865 LSM14BQ9BX40 385 aaKnown RBP13.99□□□□□ -0.17
USP47-202ENST00000339865 CTNND1O60716 968 aaKnown RBP13.99□□□□□ -0.17
USP47-202ENST00000339865 E2F6O75461 281 aa13.99□□□□□ -0.17
USP47-202ENST00000339865 NLRP12P59046 1061 aa13.99□□□□□ -0.17
USP47-202ENST00000339865 OCRLQ01968 901 aa13.99□□□□□ -0.17
USP47-202ENST00000339865 CCDC84Q86UT8 332 aaPredicted RBP13.99□□□□□ -0.17
USP47-202ENST00000339865 BICC1Q9H694 974 aaKnown RBP13.99□□□□□ -0.17
USP47-202ENST00000339865 SMYD3Q9H7B4 428 aa13.99□□□□□ -0.17
USP47-202ENST00000339865 PAIP2BQ9ULR5 123 aaKnown RBP13.99□□□□□ -0.17
USP47-202ENST00000339865 TSC22D4Q9Y3Q8 395 aa13.99□□□□□ -0.17
USP47-202ENST00000339865 EFCAB8A8MWE9 144 aa13.99□□□□□ -0.17
USP47-202ENST00000339865 RINT1Q6NUQ1 792 aa13.99□□□□□ -0.17
USP47-202ENST00000339865 DHX32Q7L7V1 743 aaKnown RBP13.99□□□□□ -0.17
USP47-202ENST00000339865 HOOK2Q96ED9 719 aa13.99□□□□□ -0.17
USP47-202ENST00000339865 ABCF3Q9NUQ8 709 aa13.99□□□□□ -0.17
USP47-202ENST00000339865 CAMSAP2Q08AD1 1489 aa13.99□□□□□ -0.17
USP47-202ENST00000339865 TOM1L1O75674 476 aa13.99□□□□□ -0.17
USP47-202ENST00000339865 RNASELQ05823 741 aaKnown RBP13.99□□□□□ -0.17
USP47-202ENST00000339865 CAPRIN1Q14444 709 aaKnown RBP13.99□□□□□ -0.17
USP47-202ENST00000339865 HABP4Q5JVS0 413 aaKnown RBP13.99□□□□□ -0.17
USP47-202ENST00000339865 NCAPH2Q6IBW4 605 aa13.99□□□□□ -0.17
USP47-202ENST00000339865 NBPF5PQ86XG9 351 aaPredicted RBP13.99□□□□□ -0.17
USP47-202ENST00000339865 LZICQ8WZA0 190 aa13.99□□□□□ -0.17
USP47-202ENST00000339865 STX18Q9P2W9 335 aaKnown RBP13.99□□□□□ -0.17
USP47-202ENST00000339865 PRPSAP1Q14558 356 aa13.98□□□□□ -0.17
USP47-202ENST00000339865 MLKLQ8NB16 471 aa13.98□□□□□ -0.17
USP47-202ENST00000339865 PCDHB13Q9Y5F0 798 aa13.98□□□□□ -0.17
USP47-202ENST00000339865 APOA1P02647 267 aa13.98□□□□□ -0.17
USP47-202ENST00000339865 GNAT2P19087 354 aa13.98□□□□□ -0.17
USP47-202ENST00000339865 ZNF467Q7Z7K2 595 aaPredicted RBP13.98□□□□□ -0.17
USP47-202ENST00000339865 UBN1Q9NPG3 1134 aa13.98□□□□□ -0.17
USP47-202ENST00000339865 ANKRD50Q9ULJ7 1429 aa13.98□□□□□ -0.17
USP47-202ENST00000339865 MCF2LO15068 1137 aa13.98□□□□□ -0.17
USP47-202ENST00000339865 ESRRAP11474 423 aaPredicted RBP13.98□□□□□ -0.17
USP47-202ENST00000339865 P4HA1P13674 534 aa13.98□□□□□ -0.17
USP47-202ENST00000339865 GSDMAQ96QA5 445 aa13.98□□□□□ -0.17
USP47-202ENST00000339865 GOLGA8CPA6NN73 597 aa13.98□□□□□ -0.17
USP47-202ENST00000339865 KIF17Q9P2E2 1029 aa13.98□□□□□ -0.17
USP47-202ENST00000339865 DNM3Q9UQ16 869 aa13.98□□□□□ -0.17
USP47-202ENST00000339865 CALCRLQ16602 461 aa13.98□□□□□ -0.17
USP47-202ENST00000339865 HADHQ16836 314 aaKnown RBP13.98□□□□□ -0.17
USP47-202ENST00000339865 NELFCDQ8IXH7 590 aa13.98□□□□□ -0.17
USP47-202ENST00000339865 PPHLN1Q8NEY8 458 aaKnown RBP13.98□□□□□ -0.17
USP47-202ENST00000339865 FAM8A1Q9UBU6 413 aa13.98□□□□□ -0.17
USP47-202ENST00000339865 G3BP2Q9UN86 482 aaKnown RBP13.98□□□□□ -0.17
USP47-202ENST00000339865 ANO1Q5XXA6 986 aa13.98□□□□□ -0.17
USP47-202ENST00000339865 HDDC2Q7Z4H3 204 aa13.98□□□□□ -0.17
USP47-202ENST00000339865 TRMT44Q8IYL2 757 aaKnown RBP13.98□□□□□ -0.17
USP47-202ENST00000339865 TRPC6Q9Y210 931 aa13.98□□□□□ -0.17
USP47-202ENST00000339865 YARSP54577 528 aaKnown RBP13.98□□□□□ -0.17
USP47-202ENST00000339865 KIF19Q2TAC6 998 aa13.98□□□□□ -0.17
USP47-202ENST00000339865 HIBCHQ6NVY1 386 aaPredicted RBP13.98□□□□□ -0.17
USP47-202ENST00000339865 SMCR8Q8TEV9 937 aaPredicted RBP13.98□□□□□ -0.17
USP47-202ENST00000339865 ORC4O43929 436 aa13.97□□□□□ -0.17
USP47-202ENST00000339865 MYCLP12524 364 aaPredicted RBP13.97□□□□□ -0.17
USP47-202ENST00000339865 TCP11X2Q5H9J9 407 aa13.97□□□□□ -0.17
USP47-202ENST00000339865 ARHGAP27Q6ZUM4 889 aa13.97□□□□□ -0.17
USP47-202ENST00000339865 JAG2Q9Y219 1238 aa13.97□□□□□ -0.17
USP47-202ENST00000339865 ZMYND10O75800 440 aa13.97□□□□□ -0.17
USP47-202ENST00000339865 THEMISQ8N1K5 641 aaPredicted RBP13.97□□□□□ -0.17
USP47-202ENST00000339865 ATP11BQ9Y2G3 1177 aa13.97□□□□□ -0.17
USP47-202ENST00000339865 VCAM1P19320 739 aa13.97□□□□□ -0.17
USP47-202ENST00000339865 KCNH5Q8NCM2 988 aa13.97□□□□□ -0.17
USP47-202ENST00000339865 PIK3R4Q99570 1358 aa13.97□□□□□ -0.17
USP47-202ENST00000339865 SYNJ2BP-COX16A0A087WUM0 186 aa13.97□□□□□ -0.17
USP47-202ENST00000339865 H7C0C1 242 aa13.97□□□□□ -0.17
USP47-202ENST00000339865 ATP5OP48047 213 aa13.97□□□□□ -0.17
USP47-202ENST00000339865 COX16Q9P0S2 106 aa13.97□□□□□ -0.17
USP47-202ENST00000339865 PRR23D1E9PI22 279 aaPredicted RBP13.97□□□□□ -0.17
USP47-202ENST00000339865 DAB1O75553 588 aa13.97□□□□□ -0.17
USP47-202ENST00000339865 PRR23D2P0DMB1 279 aaPredicted RBP13.97□□□□□ -0.17
USP47-202ENST00000339865 BFSP1Q12934 665 aa13.97□□□□□ -0.17
USP47-202ENST00000339865 TRPV6Q9H1D0 765 aa13.97□□□□□ -0.17
USP47-202ENST00000339865 HYOU1Q9Y4L1 999 aa13.97□□□□□ -0.17
USP47-202ENST00000339865 PASKQ96RG2 1323 aa13.97□□□□□ -0.17
USP47-202ENST00000339865 FSCBQ5H9T9 825 aa13.97□□□□□ -0.17
USP47-202ENST00000339865 IQCDQ96DY2 449 aa13.97□□□□□ -0.17
USP47-202ENST00000339865 EIF4E1BA6NMX2 242 aaKnown RBP13.96□□□□□ -0.17
USP47-202ENST00000339865 TRAF7Q6Q0C0 670 aa13.96□□□□□ -0.17
USP47-202ENST00000339865 SUGT1Q9Y2Z0 365 aa13.96□□□□□ -0.17
USP47-202ENST00000339865 SNX5Q9Y5X3 404 aa13.96□□□□□ -0.17
USP47-202ENST00000339865 SBNO1A3KN83 1393 aa13.96□□□□□ -0.17
USP47-202ENST00000339865 ABCC11Q96J66 1382 aa13.96□□□□□ -0.17
USP47-202ENST00000339865 H0Y3Z8 333 aa13.96□□□□□ -0.17
USP47-202ENST00000339865 XRCC5P13010 732 aaKnown RBP13.96□□□□□ -0.17
USP47-202ENST00000339865 TMED2Q15363 201 aa13.96□□□□□ -0.17
USP47-202ENST00000339865 PRPF38AQ8NAV1 312 aaKnown RBP13.96□□□□□ -0.17
USP47-202ENST00000339865 INTS4Q96HW7 963 aaKnown RBP13.96□□□□□ -0.17
USP47-202ENST00000339865 OTUD6AQ7L8S5 288 aa13.96□□□□□ -0.17
USP47-202ENST00000339865 CATSPER3Q86XQ3 398 aa13.96□□□□□ -0.17
USP47-202ENST00000339865 ZNF653Q96CK0 615 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms