RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 IFIH1Q9BYX4 1025 aaKnown RBP13.82□□□□□ -0.2
BRPF3-201ENST00000339717 MMRN2Q9H8L6 949 aa13.82□□□□□ -0.2
BRPF3-201ENST00000339717 NDE1Q9NXR1 346 aa13.82□□□□□ -0.2
BRPF3-201ENST00000339717 EURLQ9NYK6 297 aa13.82□□□□□ -0.2
BRPF3-201ENST00000339717 TRAF3IP3Q9Y228 551 aa13.82□□□□□ -0.2
BRPF3-201ENST00000339717 H0YC42 278 aa13.81□□□□□ -0.2
BRPF3-201ENST00000339717 SCTRP47872 440 aa13.81□□□□□ -0.2
BRPF3-201ENST00000339717 GUCY1A3Q02108 690 aa13.81□□□□□ -0.2
BRPF3-201ENST00000339717 CUL1Q13616 776 aa13.81□□□□□ -0.2
BRPF3-201ENST00000339717 FAM173BQ6P4H8 233 aa13.81□□□□□ -0.2
BRPF3-201ENST00000339717 ECHDC1Q9NTX5 307 aa13.81□□□□□ -0.2
BRPF3-201ENST00000339717 FANCLQ9NW38 375 aa13.81□□□□□ -0.2
BRPF3-201ENST00000339717 CUL7Q14999 1698 aa13.81□□□□□ -0.2
BRPF3-201ENST00000339717 CASP14P31944 242 aa13.81□□□□□ -0.2
BRPF3-201ENST00000339717 MED21Q13503 144 aa13.81□□□□□ -0.2
BRPF3-201ENST00000339717 RABL2BQ9UNT1 228 aa13.81□□□□□ -0.2
BRPF3-201ENST00000339717 RPRD2Q5VT52 1461 aaKnown RBP13.81□□□□□ -0.2
BRPF3-201ENST00000339717 MAGI1Q96QZ7 1491 aaPredicted RBP13.81□□□□□ -0.2
BRPF3-201ENST00000339717 UBN2Q6ZU65 1347 aa13.81□□□□□ -0.2
BRPF3-201ENST00000339717 CDHR2Q9BYE9 1310 aa13.81□□□□□ -0.2
BRPF3-201ENST00000339717 NUTM2BA6NNL0 878 aaPredicted RBP13.81□□□□□ -0.2
BRPF3-201ENST00000339717 NUTM2EB1AL46 878 aaPredicted RBP13.81□□□□□ -0.2
BRPF3-201ENST00000339717 KCNA4P22459 653 aa13.81□□□□□ -0.2
BRPF3-201ENST00000339717 AFMP43652 599 aa13.81□□□□□ -0.2
BRPF3-201ENST00000339717 MECOMQ03112 1051 aa13.81□□□□□ -0.2
BRPF3-201ENST00000339717 KRT80Q6KB66 452 aa13.81□□□□□ -0.2
BRPF3-201ENST00000339717 PEX5LQ8IYB4 626 aa13.81□□□□□ -0.2
BRPF3-201ENST00000339717 CFAP36Q96G28 342 aa13.81□□□□□ -0.2
BRPF3-201ENST00000339717 TMEM60Q9H2L4 133 aa13.81□□□□□ -0.2
BRPF3-201ENST00000339717 TMOD2Q9NZR1 351 aa13.81□□□□□ -0.2
BRPF3-201ENST00000339717 TMA7Q9Y2S6 64 aaKnown RBP13.81□□□□□ -0.2
BRPF3-201ENST00000339717 POTEFA5A3E0 1075 aa13.81□□□□□ -0.2
BRPF3-201ENST00000339717 TRPA1O75762 1119 aa13.81□□□□□ -0.2
BRPF3-201ENST00000339717 POTEIP0CG38 1075 aa13.81□□□□□ -0.2
BRPF3-201ENST00000339717 SSRP1Q08945 709 aaKnown RBP13.81□□□□□ -0.2
BRPF3-201ENST00000339717 STRN3Q13033 797 aa13.81□□□□□ -0.2
BRPF3-201ENST00000339717 ANO5Q75V66 913 aa13.81□□□□□ -0.2
BRPF3-201ENST00000339717 BZW1Q7L1Q6 419 aaKnown RBP13.81□□□□□ -0.2
BRPF3-201ENST00000339717 LZTS2Q9BRK4 669 aa13.81□□□□□ -0.2
BRPF3-201ENST00000339717 AKNAD1Q5T1N1 836 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 E4F1Q66K89 784 aaPredicted RBP13.8□□□□□ -0.2
BRPF3-201ENST00000339717 HEATR3Q7Z4Q2 680 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 FAM133AQ8N9E0 248 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 THAP11Q96EK4 314 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 NLRP2Q9NX02 1062 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 CIDEBQ9UHD4 219 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 L1RE1Q9UN81 338 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 TIAM1Q13009 1591 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 R3HDM1Q15032 1099 aaKnown RBP13.8□□□□□ -0.2
BRPF3-201ENST00000339717 VWA3BQ502W6 1294 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 BEND3Q5T5X7 828 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 TTLL11Q8NHH1 800 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 CCT7Q99832 543 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 PLAAQ9Y263 795 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 RASGRF2O14827 1237 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 NCAPH2Q6IBW4 605 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 FUKQ8N0W3 1084 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 KRI1Q8N9T8 703 aaKnown RBP13.8□□□□□ -0.2
BRPF3-201ENST00000339717 RFWD2Q8NHY2 731 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 TM6SF1Q9BZW5 370 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 GGA2Q9UJY4 613 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 MRPS9P82933 396 aaKnown RBP13.8□□□□□ -0.2
BRPF3-201ENST00000339717 IRGCQ6NXR0 463 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 FOXR1Q6PIV2 292 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 SYCE1Q8N0S2 351 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 GRAMD1AQ96CP6 724 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 VPS16Q9H269 839 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 SPATA7Q9P0W8 599 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 HDAC6Q9UBN7 1215 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 TBC1D2BQ9UPU7 963 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 PARP3Q9Y6F1 533 aa13.8□□□□□ -0.2
BRPF3-201ENST00000339717 N4BP1O75113 896 aaKnown RBP13.79□□□□□ -0.2
BRPF3-201ENST00000339717 RAPGEF3O95398 923 aa13.79□□□□□ -0.2
BRPF3-201ENST00000339717 CCDC166P0CW27 439 aa13.79□□□□□ -0.2
BRPF3-201ENST00000339717 IARSP41252 1262 aaKnown RBP13.79□□□□□ -0.2
BRPF3-201ENST00000339717 ITIH3Q06033 890 aa13.79□□□□□ -0.2
BRPF3-201ENST00000339717 SLC9C1Q4G0N8 1177 aa13.79□□□□□ -0.2
BRPF3-201ENST00000339717 DAB1O75553 588 aa13.79□□□□□ -0.2
BRPF3-201ENST00000339717 HMOX1P09601 288 aa13.79□□□□□ -0.2
BRPF3-201ENST00000339717 ZCWPW2Q504Y3 356 aa13.79□□□□□ -0.2
BRPF3-201ENST00000339717 SEL1L2Q5TEA6 688 aa13.79□□□□□ -0.2
BRPF3-201ENST00000339717 C9orf84Q5VXU9 1444 aa13.79□□□□□ -0.2
BRPF3-201ENST00000339717 PATL1Q86TB9 770 aaKnown RBP13.79□□□□□ -0.2
BRPF3-201ENST00000339717 TAF1DQ9H5J8 278 aaPredicted RBP13.79□□□□□ -0.2
BRPF3-201ENST00000339717 CCPG1Q9ULG6 757 aa13.79□□□□□ -0.2
BRPF3-201ENST00000339717 ANO9A1A5B4 782 aa13.79□□□□□ -0.2
BRPF3-201ENST00000339717 PTPDC1A2A3K4 754 aa13.79□□□□□ -0.2
BRPF3-201ENST00000339717 GOLGA8CPA6NN73 597 aa13.79□□□□□ -0.2
BRPF3-201ENST00000339717 TMEM110-MUSTN1A8MSY1 372 aa13.79□□□□□ -0.2
BRPF3-201ENST00000339717 PYGLP06737 847 aa13.79□□□□□ -0.2
BRPF3-201ENST00000339717 RAB27AP51159 221 aa13.79□□□□□ -0.2
BRPF3-201ENST00000339717 TBC1D8BQ0IIM8 1120 aa13.79□□□□□ -0.2
BRPF3-201ENST00000339717 TNIP2Q8NFZ5 429 aa13.79□□□□□ -0.2
BRPF3-201ENST00000339717 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.79□□□□□ -0.2
BRPF3-201ENST00000339717 COMMD3-BMI1R4GMX3 469 aa13.79□□□□□ -0.2
BRPF3-201ENST00000339717 ADCY1Q08828 1119 aa13.79□□□□□ -0.2
BRPF3-201ENST00000339717 MKRN3Q13064 507 aaKnown RBP13.79□□□□□ -0.2
BRPF3-201ENST00000339717 DCTN2Q13561 401 aaKnown RBP13.79□□□□□ -0.2
BRPF3-201ENST00000339717 C16orf71Q8IYS4 520 aaPredicted RBP13.79□□□□□ -0.2
BRPF3-201ENST00000339717 SEPT3Q9UH03 358 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms