RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 DISP3Q9P2K9 1392 aa12.9□□□□□ -0.34
SHANK2-201ENST00000338508 RNF40O75150 1001 aa12.9□□□□□ -0.35
SHANK2-201ENST00000338508 LMNB1P20700 586 aa12.9□□□□□ -0.35
SHANK2-201ENST00000338508 RINT1Q6NUQ1 792 aa12.9□□□□□ -0.35
SHANK2-201ENST00000338508 CCNYQ8ND76 341 aa12.9□□□□□ -0.35
SHANK2-201ENST00000338508 AS3MTQ9HBK9 375 aa12.9□□□□□ -0.35
SHANK2-201ENST00000338508 OGFRQ9NZT2 677 aa12.9□□□□□ -0.35
SHANK2-201ENST00000338508 HACD3Q9P035 362 aa12.9□□□□□ -0.35
SHANK2-201ENST00000338508 BLVRAP53004 296 aa12.89□□□□□ -0.35
SHANK2-201ENST00000338508 SPATA5Q8NB90 893 aa12.89□□□□□ -0.35
SHANK2-201ENST00000338508 CPSF3Q9UKF6 684 aaKnown RBP12.89□□□□□ -0.35
SHANK2-201ENST00000338508 G3BP2Q9UN86 482 aaKnown RBP12.89□□□□□ -0.35
SHANK2-201ENST00000338508 PLEKHG3A1L390 1219 aa12.89□□□□□ -0.35
SHANK2-201ENST00000338508 YWHAGP61981 247 aaKnown RBP eCLIP12.89□□□□□ -0.35
SHANK2-201ENST00000338508 SNX1Q13596 522 aa12.89□□□□□ -0.35
SHANK2-201ENST00000338508 ZNF148Q9UQR1 794 aa12.89□□□□□ -0.35
SHANK2-201ENST00000338508 PCDHB4Q9Y5E5 795 aa12.89□□□□□ -0.35
SHANK2-201ENST00000338508 C7orf31Q8N865 590 aa12.89□□□□□ -0.35
SHANK2-201ENST00000338508 TEKT1Q969V4 418 aa12.89□□□□□ -0.35
SHANK2-201ENST00000338508 SUCLA2Q9P2R7 463 aaPredicted RBP12.89□□□□□ -0.35
SHANK2-201ENST00000338508 NFE2L3Q9Y4A8 694 aa12.89□□□□□ -0.35
SHANK2-201ENST00000338508 EEF1GP26641 437 aaKnown RBP12.89□□□□□ -0.35
SHANK2-201ENST00000338508 SPICE1Q8N0Z3 855 aa12.89□□□□□ -0.35
SHANK2-201ENST00000338508 BCAP29Q9UHQ4 241 aa12.89□□□□□ -0.35
SHANK2-201ENST00000338508 HEXIM1O94992 359 aaKnown RBP12.89□□□□□ -0.35
SHANK2-201ENST00000338508 PRDM5Q9NQX1 630 aaPredicted RBP12.89□□□□□ -0.35
SHANK2-201ENST00000338508 RIPOR2Q9Y4F9 1068 aa12.89□□□□□ -0.35
SHANK2-201ENST00000338508 MAP3K5Q99683 1374 aa12.89□□□□□ -0.35
SHANK2-201ENST00000338508 CUTAO60888 179 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 DYNLT1P63172 113 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 BFSP1Q12934 665 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 MFSD14BQ5SR56 506 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 DCAF5Q96JK2 942 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 SLITRK6Q9H5Y7 841 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 TTC4O95801 387 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 ZAP70P43403 619 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 TMEM259Q4ZIN3 620 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 ZBTB33Q86T24 672 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 CBX8Q9HC52 389 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 STK24Q9Y6E0 443 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 NLRP12P59046 1061 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 CYP4A11Q02928 519 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 ARMCX5Q6P1M9 558 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 SUPT20HQ8NEM7 779 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 SUGT1Q9Y2Z0 365 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 SH3TC1Q8TE82 1336 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 GPC4O75487 556 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 TUBB4AP04350 444 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 OAS2P29728 719 aaKnown RBP12.88□□□□□ -0.35
SHANK2-201ENST00000338508 ZNF449Q6P9G9 518 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 EEPD1Q7L9B9 569 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 PSTPIP2Q9H939 334 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 TRAPPC10P48553 1259 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 OSTNP61366 133 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 SDR42E1Q8WUS8 393 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 PCDHA12Q9UN75 941 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 GARSP41250 739 aaKnown RBP12.88□□□□□ -0.35
SHANK2-201ENST00000338508 PDZD4Q76G19 769 aaPredicted RBP12.88□□□□□ -0.35
SHANK2-201ENST00000338508 EXT2Q93063 718 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 FAM149B1Q96BN6 582 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 NR1H4Q96RI1 486 aaPredicted RBP12.88□□□□□ -0.35
SHANK2-201ENST00000338508 GLT8D2Q9H1C3 349 aa12.88□□□□□ -0.35
SHANK2-201ENST00000338508 TBCCQ15814 346 aa12.87□□□□□ -0.35
SHANK2-201ENST00000338508 ORC6Q9Y5N6 252 aa12.87□□□□□ -0.35
SHANK2-201ENST00000338508 CLRN2A0PK11 232 aa12.87□□□□□ -0.35
SHANK2-201ENST00000338508 CLTAP09496 248 aa12.87□□□□□ -0.35
SHANK2-201ENST00000338508 MAIP1Q8WWC4 291 aa12.87□□□□□ -0.35
SHANK2-201ENST00000338508 GPKOWQ92917 476 aaPredicted RBP eCLIP12.87□□□□□ -0.35
SHANK2-201ENST00000338508 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.87□□□□□ -0.35
SHANK2-201ENST00000338508 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.87□□□□□ -0.35
SHANK2-201ENST00000338508 SETD1BQ9UPS6 1966 aaKnown RBP12.87□□□□□ -0.35
SHANK2-201ENST00000338508 JAK2O60674 1132 aa12.87□□□□□ -0.35
SHANK2-201ENST00000338508 PDE1BQ01064 536 aa12.87□□□□□ -0.35
SHANK2-201ENST00000338508 SLC9A5Q14940 896 aa12.87□□□□□ -0.35
SHANK2-201ENST00000338508 RAB44Q7Z6P3 723 aaPredicted RBP12.87□□□□□ -0.35
SHANK2-201ENST00000338508 PLEKHM2Q8IWE5 1019 aa12.87□□□□□ -0.35
SHANK2-201ENST00000338508 SCHIP1Q9P0W5 487 aaPredicted RBP12.87□□□□□ -0.35
SHANK2-201ENST00000338508 KLHL14Q9P2G3 628 aa12.87□□□□□ -0.35
SHANK2-201ENST00000338508 SERTAD1Q9UHV2 236 aa12.87□□□□□ -0.35
SHANK2-201ENST00000338508 ACTN1P12814 892 aa12.87□□□□□ -0.35
SHANK2-201ENST00000338508 RSBN1LQ6PCB5 846 aaPredicted RBP12.87□□□□□ -0.35
SHANK2-201ENST00000338508 G2E3Q7L622 706 aa12.87□□□□□ -0.35
SHANK2-201ENST00000338508 DNAAF3Q8N9W5 541 aa12.87□□□□□ -0.35
SHANK2-201ENST00000338508 APPBP2Q92624 585 aa12.87□□□□□ -0.35
SHANK2-201ENST00000338508 ERO1AQ96HE7 468 aa12.87□□□□□ -0.35
SHANK2-201ENST00000338508 DESI2Q9BSY9 194 aa12.87□□□□□ -0.35
SHANK2-201ENST00000338508 DDX25Q9UHL0 483 aaKnown RBP12.87□□□□□ -0.35
SHANK2-201ENST00000338508 TSR3Q9UJK0 312 aaKnown RBP12.87□□□□□ -0.35
SHANK2-201ENST00000338508 ABT1Q9ULW3 272 aaKnown RBP12.87□□□□□ -0.35
SHANK2-201ENST00000338508 FAF1Q9UNN5 650 aaPredicted RBP12.87□□□□□ -0.35
SHANK2-201ENST00000338508 FANCAO15360 1455 aa12.87□□□□□ -0.35
SHANK2-201ENST00000338508 ATF2P15336 505 aa12.87□□□□□ -0.35
SHANK2-201ENST00000338508 ALDH1B1P30837 517 aa12.87□□□□□ -0.35
SHANK2-201ENST00000338508 POLR2FP61218 127 aaKnown RBP12.87□□□□□ -0.35
SHANK2-201ENST00000338508 FAM178BQ8IXR5 827 aa12.87□□□□□ -0.35
SHANK2-201ENST00000338508 EYA2O00167 538 aa12.87□□□□□ -0.35
SHANK2-201ENST00000338508 PEX19P40855 299 aa12.87□□□□□ -0.35
SHANK2-201ENST00000338508 TRMT10CQ7L0Y3 403 aaKnown RBP12.87□□□□□ -0.35
SHANK2-201ENST00000338508 POTEDQ86YR6 584 aa12.87□□□□□ -0.35
SHANK2-201ENST00000338508 TRPA1O75762 1119 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms