RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 PDHBP11177 359 aa10□□□□□ -0.81
SNCA-201ENST00000336904 KLK7P49862 253 aa10□□□□□ -0.81
SNCA-201ENST00000336904 APTXQ7Z2E3 356 aaKnown RBP10□□□□□ -0.81
SNCA-201ENST00000336904 SPATA20Q8TB22 786 aa10□□□□□ -0.81
SNCA-201ENST00000336904 CERKQ8TCT0 537 aa10□□□□□ -0.81
SNCA-201ENST00000336904 RRP36Q96EU6 259 aaKnown RBP10□□□□□ -0.81
SNCA-201ENST00000336904 NUDT12Q9BQG2 462 aa10□□□□□ -0.81
SNCA-201ENST00000336904 DISC1Q9NRI5 854 aa10□□□□□ -0.81
SNCA-201ENST00000336904 PPP2R2CQ9Y2T4 447 aa10□□□□□ -0.81
SNCA-201ENST00000336904 UBR3Q6ZT12 1888 aa10□□□□□ -0.81
SNCA-201ENST00000336904 FAM170AA1A519 330 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 USP17L10C9JJH3 530 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 PPP1R11O60927 126 aaPredicted RBP9.99□□□□□ -0.81
SNCA-201ENST00000336904 SRGNP10124 158 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 CALML3P27482 149 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 CACNB1Q02641 598 aaPredicted RBP9.99□□□□□ -0.81
SNCA-201ENST00000336904 KRT31Q15323 416 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 KMT5BQ4FZB7 885 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 SOGA3Q5TF21 947 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 CDC42EP5Q6NZY7 148 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 REXO1L1PQ8IX06 675 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 ACRBPQ8NEB7 543 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 NEDD1Q8NHV4 660 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 CDK5RAP2Q96SN8 1893 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 M0R2N6 131 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 GNG11P61952 73 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 SPATA1Q5VX52 437 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 KANK3Q6NY19 840 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 RAD9BQ6WBX8 426 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 SPICE1Q8N0Z3 855 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 GLIS3Q8NEA6 775 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 DACH1Q9UI36 760 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 MYH1P12882 1939 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 DLEC1Q9Y238 1755 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 DDTLA6NHG4 134 aaPredicted RBP9.99□□□□□ -0.81
SNCA-201ENST00000336904 USP17L15C9J2P7 530 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 USP17L13C9JLJ4 530 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 USP17L11C9JVI0 530 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 USP17L18D6R9N7 530 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 USP17L22D6RA61 530 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 USP17L17D6RBQ6 530 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 USP17L19D6RCP7 530 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 USP17L20D6RJB6 530 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 SSBP05455 408 aaKnown RBP eCLIP9.99□□□□□ -0.81
SNCA-201ENST00000336904 USP17L24Q0WX57 530 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 NR1I3Q14994 352 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 USP17L6PQ6QN14 398 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 MTMR4Q9NYA4 1195 aa9.99□□□□□ -0.81
SNCA-201ENST00000336904 CTIFO43310 598 aaKnown RBP9.98□□□□□ -0.81
SNCA-201ENST00000336904 ADRA2BP18089 450 aa9.98□□□□□ -0.81
SNCA-201ENST00000336904 TXLNAP40222 546 aa9.98□□□□□ -0.81
SNCA-201ENST00000336904 PAK1Q13153 545 aa9.98□□□□□ -0.81
SNCA-201ENST00000336904 AOC3Q16853 763 aa9.98□□□□□ -0.81
SNCA-201ENST00000336904 USH1GQ495M9 461 aa9.98□□□□□ -0.81
SNCA-201ENST00000336904 CABP7Q86V35 215 aa9.98□□□□□ -0.81
SNCA-201ENST00000336904 SLC39A2Q9NP94 309 aa9.98□□□□□ -0.81
SNCA-201ENST00000336904 TBC1D7Q9P0N9 293 aa9.98□□□□□ -0.81
SNCA-201ENST00000336904 ATP6V0A2Q9Y487 856 aa9.98□□□□□ -0.81
SNCA-201ENST00000336904 PAXBP1Q9Y5B6 917 aa9.98□□□□□ -0.81
SNCA-201ENST00000336904 BRWD3Q6RI45 1802 aa9.98□□□□□ -0.81
SNCA-201ENST00000336904 NRDCO43847 1150 aa9.98□□□□□ -0.81
SNCA-201ENST00000336904 ASIC1P78348 528 aa9.98□□□□□ -0.81
SNCA-201ENST00000336904 NONOQ15233 471 aaKnown RBP eCLIP9.98□□□□□ -0.81
SNCA-201ENST00000336904 LRRC41Q15345 812 aa9.98□□□□□ -0.81
SNCA-201ENST00000336904 TRIM65Q6PJ69 517 aa9.98□□□□□ -0.81
SNCA-201ENST00000336904 ADGRF4Q8IZF3 695 aa9.98□□□□□ -0.81
SNCA-201ENST00000336904 REXO1Q8N1G1 1221 aaKnown RBP9.98□□□□□ -0.81
SNCA-201ENST00000336904 GSDMAQ96QA5 445 aa9.98□□□□□ -0.81
SNCA-201ENST00000336904 DNAJC18Q9H819 358 aa9.98□□□□□ -0.81
SNCA-201ENST00000336904 TRIM10Q9UDY6 481 aa9.98□□□□□ -0.81
SNCA-201ENST00000336904 ADD3Q9UEY8 706 aaKnown RBP9.98□□□□□ -0.81
SNCA-201ENST00000336904 SERPINB13Q9UIV8 391 aa9.98□□□□□ -0.81
SNCA-201ENST00000336904 MAST2Q6P0Q8 1798 aa9.98□□□□□ -0.81
SNCA-201ENST00000336904 ROBO3Q96MS0 1386 aa9.97□□□□□ -0.81
SNCA-201ENST00000336904 A0A1B0GTH6 734 aa9.97□□□□□ -0.81
SNCA-201ENST00000336904 KCNJ18B7U540 433 aa9.97□□□□□ -0.81
SNCA-201ENST00000336904 GYPCP04921 128 aa9.97□□□□□ -0.81
SNCA-201ENST00000336904 IDEP14735 1019 aa9.97□□□□□ -0.81
SNCA-201ENST00000336904 SHMT1P34896 483 aa9.97□□□□□ -0.81
SNCA-201ENST00000336904 STK4Q13043 487 aa9.97□□□□□ -0.81
SNCA-201ENST00000336904 IKQ13123 557 aaPredicted RBP9.97□□□□□ -0.81
SNCA-201ENST00000336904 TBX2Q13207 712 aaPredicted RBP9.97□□□□□ -0.81
SNCA-201ENST00000336904 KCNJ12Q14500 433 aa9.97□□□□□ -0.81
SNCA-201ENST00000336904 PPFIBP1Q86W92 1011 aa9.97□□□□□ -0.81
SNCA-201ENST00000336904 CCDC148Q8NFR7 591 aa9.97□□□□□ -0.81
SNCA-201ENST00000336904 TRIM47Q96LD4 638 aa9.97□□□□□ -0.81
SNCA-201ENST00000336904 CARD6Q9BX69 1037 aa9.97□□□□□ -0.81
SNCA-201ENST00000336904 SRRTQ9BXP5 876 aaKnown RBP9.97□□□□□ -0.81
SNCA-201ENST00000336904 KANSL2Q9H9L4 492 aa9.97□□□□□ -0.81
SNCA-201ENST00000336904 MYH8P13535 1937 aa9.97□□□□□ -0.81
SNCA-201ENST00000336904 GTPBP6O43824 516 aaPredicted RBP9.97□□□□□ -0.81
SNCA-201ENST00000336904 ONECUT3O60422 494 aaPredicted RBP9.97□□□□□ -0.81
SNCA-201ENST00000336904 OR52Z1P0C646 297 aa9.97□□□□□ -0.81
SNCA-201ENST00000336904 PRKCSHP14314 528 aaPredicted RBP9.97□□□□□ -0.81
SNCA-201ENST00000336904 GNAQP50148 359 aa9.97□□□□□ -0.81
SNCA-201ENST00000336904 UBXN1Q04323 297 aa9.97□□□□□ -0.81
SNCA-201ENST00000336904 MCM6Q14566 821 aa9.97□□□□□ -0.81
SNCA-201ENST00000336904 ZYXQ15942 572 aaKnown RBP9.97□□□□□ -0.81
SNCA-201ENST00000336904 APOBEC3HQ6NTF7 200 aaKnown RBP9.97□□□□□ -0.81
SNCA-201ENST00000336904 FBXO38Q6PIJ6 1188 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms