RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 QRICH1Q2TAL8 776 aa20.29■□□□□ 0.84
CHGA-202ENST00000334654 PARK7Q99497 189 aaKnown RBP20.29■□□□□ 0.84
CHGA-202ENST00000334654 LLPHQ9BRT6 129 aaKnown RBP20.29■□□□□ 0.84
CHGA-202ENST00000334654 RNF26Q9BY78 433 aaPredicted RBP20.29■□□□□ 0.84
CHGA-202ENST00000334654 ZNF214Q9UL59 606 aaPredicted RBP20.29■□□□□ 0.84
CHGA-202ENST00000334654 ATP2A1O14983 1001 aa20.28■□□□□ 0.84
CHGA-202ENST00000334654 ZBTB5O15062 677 aa20.28■□□□□ 0.84
CHGA-202ENST00000334654 ALDH1A1P00352 501 aa20.28■□□□□ 0.84
CHGA-202ENST00000334654 CRHR2Q13324 411 aa20.28■□□□□ 0.84
CHGA-202ENST00000334654 Q3C1V9 767 aa20.28■□□□□ 0.84
CHGA-202ENST00000334654 PIBF1Q8WXW3 757 aa20.28■□□□□ 0.84
CHGA-202ENST00000334654 SLC26A6Q9BXS9 759 aa20.28■□□□□ 0.84
CHGA-202ENST00000334654 RNF186Q9NXI6 227 aa20.28■□□□□ 0.84
CHGA-202ENST00000334654 RABGAP1Q9Y3P9 1069 aa20.28■□□□□ 0.84
CHGA-202ENST00000334654 PNMA6FA0A0J9YX94 578 aa20.27■□□□□ 0.84
CHGA-202ENST00000334654 PTPDC1A2A3K4 754 aa20.27■□□□□ 0.84
CHGA-202ENST00000334654 TLR2O60603 784 aa20.27■□□□□ 0.84
CHGA-202ENST00000334654 ZBED4O75132 1171 aa20.27■□□□□ 0.84
CHGA-202ENST00000334654 CPLX2Q6PUV4 134 aaKnown RBP20.27■□□□□ 0.84
CHGA-202ENST00000334654 HOMER1Q86YM7 354 aa20.27■□□□□ 0.84
CHGA-202ENST00000334654 MB21D1Q8N884 522 aa20.27■□□□□ 0.84
CHGA-202ENST00000334654 RRP36Q96EU6 259 aaKnown RBP20.27■□□□□ 0.84
CHGA-202ENST00000334654 CFHR5Q9BXR6 569 aa20.27■□□□□ 0.84
CHGA-202ENST00000334654 STK36Q9NRP7 1315 aa20.26■□□□□ 0.83
CHGA-202ENST00000334654 CDKL5O76039 1030 aa20.26■□□□□ 0.83
CHGA-202ENST00000334654 BCRP11274 1271 aa20.26■□□□□ 0.83
CHGA-202ENST00000334654 TAL1P17542 331 aaPredicted RBP20.26■□□□□ 0.83
CHGA-202ENST00000334654 GCLCP48506 637 aaPredicted RBP20.26■□□□□ 0.83
CHGA-202ENST00000334654 SSRP1Q08945 709 aaKnown RBP20.26■□□□□ 0.83
CHGA-202ENST00000334654 CCDC174Q6PII3 467 aa20.26■□□□□ 0.83
CHGA-202ENST00000334654 C17orf99Q6UX52 265 aa20.26■□□□□ 0.83
CHGA-202ENST00000334654 SMCR8Q8TEV9 937 aaPredicted RBP20.26■□□□□ 0.83
CHGA-202ENST00000334654 AGBL1Q96MI9 1066 aa20.26■□□□□ 0.83
CHGA-202ENST00000334654 ZFYVE28Q9HCC9 887 aa20.26■□□□□ 0.83
CHGA-202ENST00000334654 RAVER2Q9HCJ3 691 aaKnown RBP20.26■□□□□ 0.83
CHGA-202ENST00000334654 MORF4L1Q9UBU8 362 aa20.26■□□□□ 0.83
CHGA-202ENST00000334654 ICAM1P05362 532 aa20.25■□□□□ 0.83
CHGA-202ENST00000334654 OAZ1P54368 228 aa20.25■□□□□ 0.83
CHGA-202ENST00000334654 GTF3C2Q8WUA4 911 aaPredicted RBP20.25■□□□□ 0.83
CHGA-202ENST00000334654 SHISA4Q96DD7 197 aa20.25■□□□□ 0.83
CHGA-202ENST00000334654 INTS4Q96HW7 963 aaKnown RBP20.25■□□□□ 0.83
CHGA-202ENST00000334654 PAGR1Q9BTK6 254 aa20.25■□□□□ 0.83
CHGA-202ENST00000334654 RIPK3Q9Y572 518 aa20.25■□□□□ 0.83
CHGA-202ENST00000334654 TRPA1O75762 1119 aa20.24■□□□□ 0.83
CHGA-202ENST00000334654 PFKFB3Q16875 520 aaPredicted RBP20.24■□□□□ 0.83
CHGA-202ENST00000334654 CPXCR1Q8N123 301 aa20.24■□□□□ 0.83
CHGA-202ENST00000334654 ANKRD13CQ8N6S4 541 aa20.24■□□□□ 0.83
CHGA-202ENST00000334654 DDX11Q96FC9 970 aa20.24■□□□□ 0.83
CHGA-202ENST00000334654 AIFM3Q96NN9 605 aa20.24■□□□□ 0.83
CHGA-202ENST00000334654 ORC3Q9UBD5 711 aaPredicted RBP20.24■□□□□ 0.83
CHGA-202ENST00000334654 CPA4Q9UI42 421 aa20.24■□□□□ 0.83
CHGA-202ENST00000334654 TBC1D8O95759 1140 aa20.24■□□□□ 0.83
CHGA-202ENST00000334654 STAT3P40763 770 aa20.24■□□□□ 0.83
CHGA-202ENST00000334654 ERVK-9P63128 1117 aa20.24■□□□□ 0.83
CHGA-202ENST00000334654 ERVK-24P63145 666 aa20.24■□□□□ 0.83
CHGA-202ENST00000334654 FBXO11Q86XK2 927 aa20.24■□□□□ 0.83
CHGA-202ENST00000334654 TRIM22Q8IYM9 498 aa20.24■□□□□ 0.83
CHGA-202ENST00000334654 COA7Q96BR5 231 aa20.24■□□□□ 0.83
CHGA-202ENST00000334654 SPATC1LQ9H0A9 340 aa20.24■□□□□ 0.83
CHGA-202ENST00000334654 DEXIO95424 95 aa20.23■□□□□ 0.83
CHGA-202ENST00000334654 SCG2P13521 617 aa20.23■□□□□ 0.83
CHGA-202ENST00000334654 FAM110CQ1W6H9 321 aa20.23■□□□□ 0.83
CHGA-202ENST00000334654 WWC2Q6AWC2 1192 aa20.23■□□□□ 0.83
CHGA-202ENST00000334654 TYW1BQ6NUM6 668 aa20.23■□□□□ 0.83
CHGA-202ENST00000334654 GPKOWQ92917 476 aaPredicted RBP eCLIP20.23■□□□□ 0.83
CHGA-202ENST00000334654 AMNQ9BXJ7 453 aa20.23■□□□□ 0.83
CHGA-202ENST00000334654 MOV10L1Q9BXT6 1211 aaKnown RBP20.23■□□□□ 0.83
CHGA-202ENST00000334654 TEX13BQ9BXU2 312 aa20.23■□□□□ 0.83
CHGA-202ENST00000334654 RBM27Q9P2N5 1060 aaKnown RBP20.23■□□□□ 0.83
CHGA-202ENST00000334654 SEC63Q9UGP8 760 aaKnown RBP20.23■□□□□ 0.83
CHGA-202ENST00000334654 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.23■□□□□ 0.83
CHGA-202ENST00000334654 MAP2K1Q02750 393 aaPredicted RBP20.22■□□□□ 0.83
CHGA-202ENST00000334654 BECN1Q14457 450 aa20.22■□□□□ 0.83
CHGA-202ENST00000334654 SNRNP48Q6IEG0 339 aaKnown RBP20.22■□□□□ 0.83
CHGA-202ENST00000334654 RIOX2Q8IUF8 465 aa20.22■□□□□ 0.83
CHGA-202ENST00000334654 GPRC5AQ8NFJ5 357 aa20.22■□□□□ 0.83
CHGA-202ENST00000334654 WBP1LQ9NX94 342 aa20.22■□□□□ 0.83
CHGA-202ENST00000334654 STXBP3O00186 592 aa20.21■□□□□ 0.83
CHGA-202ENST00000334654 OPLAHO14841 1288 aa20.21■□□□□ 0.83
CHGA-202ENST00000334654 GJB2P29033 226 aa20.21■□□□□ 0.83
CHGA-202ENST00000334654 ANP32AP39687 249 aaKnown RBP20.21■□□□□ 0.83
CHGA-202ENST00000334654 SLC4A3P48751 1232 aa20.21■□□□□ 0.83
CHGA-202ENST00000334654 HMGN5P82970 282 aaKnown RBP20.21■□□□□ 0.83
CHGA-202ENST00000334654 AKAP17AQ02040 695 aaKnown RBP20.21■□□□□ 0.83
CHGA-202ENST00000334654 PLS1Q14651 629 aa20.21■□□□□ 0.83
CHGA-202ENST00000334654 USH1GQ495M9 461 aa20.21■□□□□ 0.83
CHGA-202ENST00000334654 JMYQ8N9B5 988 aa20.21■□□□□ 0.83
CHGA-202ENST00000334654 PORCNQ9H237 461 aa20.21■□□□□ 0.83
CHGA-202ENST00000334654 FOXD4L1Q9NU39 408 aa20.21■□□□□ 0.83
CHGA-202ENST00000334654 SAGE1Q9NXZ1 904 aa20.21■□□□□ 0.83
CHGA-202ENST00000334654 BARHL2Q9NY43 387 aa20.21■□□□□ 0.83
CHGA-202ENST00000334654 CCPG1Q9ULG6 757 aa20.21■□□□□ 0.83
CHGA-202ENST00000334654 CTDP1Q9Y5B0 961 aaPredicted RBP20.21■□□□□ 0.83
CHGA-202ENST00000334654 PCDHA1Q9Y5I3 950 aa20.21■□□□□ 0.83
CHGA-202ENST00000334654 DOCK3Q8IZD9 2030 aa20.21■□□□□ 0.83
CHGA-202ENST00000334654 MUM1L1Q5H9M0 696 aa20.2■□□□□ 0.82
CHGA-202ENST00000334654 CLEC4DQ8WXI8 215 aa20.2■□□□□ 0.82
CHGA-202ENST00000334654 GJB4Q9NTQ9 266 aa20.2■□□□□ 0.82
CHGA-202ENST00000334654 ALAS1P13196 640 aa20.19■□□□□ 0.82
CHGA-202ENST00000334654 HEATR3Q7Z4Q2 680 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms