RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 CYTH3O43739 400 aa18.02■□□□□ 0.48
PDGFB-201ENST00000331163 STX17P56962 302 aa18.02■□□□□ 0.48
PDGFB-201ENST00000331163 JAG1P78504 1218 aa18.02■□□□□ 0.48
PDGFB-201ENST00000331163 QRICH1Q2TAL8 776 aa18.02■□□□□ 0.48
PDGFB-201ENST00000331163 USP49Q70CQ1 688 aa18.02■□□□□ 0.48
PDGFB-201ENST00000331163 TBCKQ8TEA7 893 aa18.02■□□□□ 0.48
PDGFB-201ENST00000331163 CNKSR2Q8WXI2 1034 aa18.02■□□□□ 0.48
PDGFB-201ENST00000331163 BLZF1Q9H2G9 400 aa18.02■□□□□ 0.48
PDGFB-201ENST00000331163 GOPCQ9HD26 462 aa18.02■□□□□ 0.48
PDGFB-201ENST00000331163 CGNQ9P2M7 1197 aaKnown RBP18.02■□□□□ 0.48
PDGFB-201ENST00000331163 PP2D1A8MPX8 630 aa18.02■□□□□ 0.47
PDGFB-201ENST00000331163 ASNSP08243 561 aa18.02■□□□□ 0.47
PDGFB-201ENST00000331163 ANO6Q4KMQ2 910 aa18.02■□□□□ 0.47
PDGFB-201ENST00000331163 LUZP1Q86V48 1076 aa18.02■□□□□ 0.47
PDGFB-201ENST00000331163 FBXO11Q86XK2 927 aa18.02■□□□□ 0.47
PDGFB-201ENST00000331163 CEP57L1Q8IYX8 460 aa18.02■□□□□ 0.47
PDGFB-201ENST00000331163 KRI1Q8N9T8 703 aaKnown RBP18.02■□□□□ 0.47
PDGFB-201ENST00000331163 C16orf45Q96MC5 204 aaPredicted RBP18.02■□□□□ 0.47
PDGFB-201ENST00000331163 MAD2L2Q9UI95 211 aa18.02■□□□□ 0.47
PDGFB-201ENST00000331163 PYCARDQ9ULZ3 195 aa18.02■□□□□ 0.47
PDGFB-201ENST00000331163 CEP131Q9UPN4 1083 aa18.02■□□□□ 0.47
PDGFB-201ENST00000331163 IBSPP21815 317 aaPredicted RBP18.01■□□□□ 0.47
PDGFB-201ENST00000331163 CCDC34Q96HJ3 373 aa18.01■□□□□ 0.47
PDGFB-201ENST00000331163 PRPF3O43395 683 aaKnown RBP18.01■□□□□ 0.47
PDGFB-201ENST00000331163 STAT2P52630 851 aa18.01■□□□□ 0.47
PDGFB-201ENST00000331163 PRR16Q569H4 304 aa18.01■□□□□ 0.47
PDGFB-201ENST00000331163 RILPL1Q5EBL4 403 aa18.01■□□□□ 0.47
PDGFB-201ENST00000331163 MAEAQ7L5Y9 396 aa18.01■□□□□ 0.47
PDGFB-201ENST00000331163 PTPN21Q16825 1174 aa18■□□□□ 0.47
PDGFB-201ENST00000331163 TMOD4Q9NZQ9 345 aa18■□□□□ 0.47
PDGFB-201ENST00000331163 CCPG1Q9ULG6 757 aa18■□□□□ 0.47
PDGFB-201ENST00000331163 A0A1W2PRG0 241 aa18■□□□□ 0.47
PDGFB-201ENST00000331163 MRPL12P52815 198 aaKnown RBP18■□□□□ 0.47
PDGFB-201ENST00000331163 RRP1BQ14684 758 aaKnown RBP18■□□□□ 0.47
PDGFB-201ENST00000331163 DCAF15Q66K64 600 aa18■□□□□ 0.47
PDGFB-201ENST00000331163 TYW1BQ6NUM6 668 aa18■□□□□ 0.47
PDGFB-201ENST00000331163 ADAMTS3O15072 1205 aa18■□□□□ 0.47
PDGFB-201ENST00000331163 NONOQ15233 471 aaKnown RBP eCLIP18■□□□□ 0.47
PDGFB-201ENST00000331163 AGXT2Q9BYV1 514 aa18■□□□□ 0.47
PDGFB-201ENST00000331163 ZNF202O95125 648 aa17.99■□□□□ 0.47
PDGFB-201ENST00000331163 SMC2O95347 1197 aa17.99■□□□□ 0.47
PDGFB-201ENST00000331163 PFKFB1P16118 471 aa17.99■□□□□ 0.47
PDGFB-201ENST00000331163 SPDYE2Q495Y8 402 aa17.99■□□□□ 0.47
PDGFB-201ENST00000331163 LINC00301Q8NCQ3 95 aa17.99■□□□□ 0.47
PDGFB-201ENST00000331163 PRIMPOLQ96LW4 560 aa17.99■□□□□ 0.47
PDGFB-201ENST00000331163 SBF2Q86WG5 1849 aa17.99■□□□□ 0.47
PDGFB-201ENST00000331163 CYP4A11Q02928 519 aa17.99■□□□□ 0.47
PDGFB-201ENST00000331163 PNOCQ13519 176 aa17.99■□□□□ 0.47
PDGFB-201ENST00000331163 GRM4Q14833 912 aa17.99■□□□□ 0.47
PDGFB-201ENST00000331163 DTHD1Q6ZMT9 781 aa17.99■□□□□ 0.47
PDGFB-201ENST00000331163 CSRNP2Q9H175 543 aa17.99■□□□□ 0.47
PDGFB-201ENST00000331163 TCP11L1Q9NUJ3 509 aa17.99■□□□□ 0.47
PDGFB-201ENST00000331163 KCNH3Q9ULD8 1083 aa17.99■□□□□ 0.47
PDGFB-201ENST00000331163 ZNF165P49910 485 aa17.99■□□□□ 0.47
PDGFB-201ENST00000331163 MKRN1Q9UHC7 482 aaKnown RBP17.99■□□□□ 0.47
PDGFB-201ENST00000331163 CNTNAP5Q8WYK1 1306 aa17.98■□□□□ 0.47
PDGFB-201ENST00000331163 ENTPD3O75355 529 aa17.98■□□□□ 0.47
PDGFB-201ENST00000331163 ZNF543Q08ER8 600 aa17.98■□□□□ 0.47
PDGFB-201ENST00000331163 PFKFB3Q16875 520 aaPredicted RBP17.98■□□□□ 0.47
PDGFB-201ENST00000331163 PDS5AQ29RF7 1337 aaKnown RBP17.98■□□□□ 0.47
PDGFB-201ENST00000331163 POTEIP0CG38 1075 aa17.98■□□□□ 0.47
PDGFB-201ENST00000331163 POTEJP0CG39 1038 aa17.98■□□□□ 0.47
PDGFB-201ENST00000331163 NAA30Q147X3 362 aaPredicted RBP17.98■□□□□ 0.47
PDGFB-201ENST00000331163 SYDE2Q5VT97 1194 aa17.98■□□□□ 0.47
PDGFB-201ENST00000331163 FILIP1Q7Z7B0 1213 aa17.98■□□□□ 0.47
PDGFB-201ENST00000331163 TBC1D5Q92609 795 aa17.98■□□□□ 0.47
PDGFB-201ENST00000331163 WNK3Q9BYP7 1800 aa17.98■□□□□ 0.47
PDGFB-201ENST00000331163 MYH2Q9UKX2 1941 aa17.98■□□□□ 0.47
PDGFB-201ENST00000331163 TRAF5O00463 557 aa17.97■□□□□ 0.47
PDGFB-201ENST00000331163 KARSQ15046 597 aaKnown RBP17.97■□□□□ 0.47
PDGFB-201ENST00000331163 ASPRV1Q53RT3 343 aa17.97■□□□□ 0.47
PDGFB-201ENST00000331163 SMCR8Q8TEV9 937 aaPredicted RBP17.97■□□□□ 0.47
PDGFB-201ENST00000331163 HOOK2Q96ED9 719 aa17.97■□□□□ 0.47
PDGFB-201ENST00000331163 GOLPH3LQ9H4A5 285 aa17.97■□□□□ 0.47
PDGFB-201ENST00000331163 GPRC5DQ9NZD1 345 aa17.97■□□□□ 0.47
PDGFB-201ENST00000331163 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.97■□□□□ 0.47
PDGFB-201ENST00000331163 V9GYY5 206 aaPredicted RBP17.97■□□□□ 0.47
PDGFB-201ENST00000331163 IRS2Q9Y4H2 1338 aa17.97■□□□□ 0.47
PDGFB-201ENST00000331163 GPATCH4Q5T3I0 446 aaKnown RBP17.97■□□□□ 0.47
PDGFB-201ENST00000331163 TICAM2Q86XR7 235 aa17.97■□□□□ 0.47
PDGFB-201ENST00000331163 BBXQ8WY36 941 aaPredicted RBP17.97■□□□□ 0.47
PDGFB-201ENST00000331163 PRELPP51888 382 aa17.97■□□□□ 0.47
PDGFB-201ENST00000331163 IRX3P78415 501 aaPredicted RBP17.97■□□□□ 0.47
PDGFB-201ENST00000331163 PKN1Q16512 942 aa17.97■□□□□ 0.47
PDGFB-201ENST00000331163 SUPT20HL1Q3ZLR7 823 aa17.97■□□□□ 0.47
PDGFB-201ENST00000331163 ALDH8A1Q9H2A2 487 aaPredicted RBP17.97■□□□□ 0.47
PDGFB-201ENST00000331163 JMJD4Q9H9V9 463 aa17.97■□□□□ 0.47
PDGFB-201ENST00000331163 RRAGCQ9HB90 399 aa17.97■□□□□ 0.47
PDGFB-201ENST00000331163 SERTAD1Q9UHV2 236 aa17.97■□□□□ 0.47
PDGFB-201ENST00000331163 PTGS1P23219 599 aa17.96■□□□□ 0.47
PDGFB-201ENST00000331163 STAT6P42226 847 aa17.96■□□□□ 0.47
PDGFB-201ENST00000331163 DYMQ7RTS9 669 aa17.96■□□□□ 0.47
PDGFB-201ENST00000331163 AGBL1Q96MI9 1066 aa17.96■□□□□ 0.47
PDGFB-201ENST00000331163 FOXN1O15353 648 aa17.96■□□□□ 0.47
PDGFB-201ENST00000331163 SH2D3AQ9BRG2 576 aa17.96■□□□□ 0.47
PDGFB-201ENST00000331163 AMNQ9BXJ7 453 aa17.96■□□□□ 0.47
PDGFB-201ENST00000331163 ANKRD36CQ5JPF3 1778 aa17.96■□□□□ 0.47
PDGFB-201ENST00000331163 TESPA1A2RU30 521 aaPredicted RBP17.96■□□□□ 0.47
PDGFB-201ENST00000331163 TDP2O95551 362 aa17.96■□□□□ 0.47
PDGFB-201ENST00000331163 TYRO3Q06418 890 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms