RNA–Protein interactions for RNA: ENST00000330688.8

RARB-201, Transcript of retinoic acid receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARB, Length 3,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-201ENST00000330688 PARP1P09874 1014 aaKnown RBP11.31□□□□□ -0.6
RARB-201ENST00000330688 CNBD1Q8NA66 436 aa11.31□□□□□ -0.6
RARB-201ENST00000330688 RASSF8Q8NHQ8 419 aa11.31□□□□□ -0.6
RARB-201ENST00000330688 NUP88Q99567 741 aaPredicted RBP11.31□□□□□ -0.6
RARB-201ENST00000330688 CD209Q9NNX6 404 aa11.31□□□□□ -0.6
RARB-201ENST00000330688 PLA2G4AP47712 749 aa11.31□□□□□ -0.6
RARB-201ENST00000330688 KCNB1Q14721 858 aa11.31□□□□□ -0.6
RARB-201ENST00000330688 TERF2Q15554 542 aa11.31□□□□□ -0.6
RARB-201ENST00000330688 USP17L2Q6R6M4 530 aa11.31□□□□□ -0.6
RARB-201ENST00000330688 C15orf52Q6ZUT6 534 aaKnown RBP11.31□□□□□ -0.6
RARB-201ENST00000330688 TMTC1Q8IUR5 882 aa11.31□□□□□ -0.6
RARB-201ENST00000330688 GPR161Q8N6U8 529 aaKnown RBP11.31□□□□□ -0.6
RARB-201ENST00000330688 EYA3Q99504 573 aa11.31□□□□□ -0.6
RARB-201ENST00000330688 ZMYND12Q9H0C1 365 aa11.31□□□□□ -0.6
RARB-201ENST00000330688 KIF5CO60282 957 aa11.3□□□□□ -0.6
RARB-201ENST00000330688 KRT9P35527 623 aa11.3□□□□□ -0.6
RARB-201ENST00000330688 UBXN1Q04323 297 aa11.3□□□□□ -0.6
RARB-201ENST00000330688 PDE4CQ08493 712 aa11.3□□□□□ -0.6
RARB-201ENST00000330688 ZNF569Q5MCW4 686 aa11.3□□□□□ -0.6
RARB-201ENST00000330688 FAM196AQ6ZSG2 479 aa11.3□□□□□ -0.6
RARB-201ENST00000330688 C16orf86Q6ZW13 317 aa11.3□□□□□ -0.6
RARB-201ENST00000330688 ANKRD20A12PQ8NF67 263 aa11.3□□□□□ -0.6
RARB-201ENST00000330688 SPZ1Q9BXG8 430 aa11.3□□□□□ -0.6
RARB-201ENST00000330688 GPR75-ASB3A0A0A6YYF3 556 aa11.3□□□□□ -0.6
RARB-201ENST00000330688 RHOBTB3O94955 611 aa11.3□□□□□ -0.6
RARB-201ENST00000330688 PRPHP41219 470 aa11.3□□□□□ -0.6
RARB-201ENST00000330688 PRR5LQ6MZQ0 368 aa11.3□□□□□ -0.6
RARB-201ENST00000330688 CHP1Q99653 195 aa11.3□□□□□ -0.6
RARB-201ENST00000330688 LZTS2Q9BRK4 669 aa11.3□□□□□ -0.6
RARB-201ENST00000330688 PARD6BQ9BYG5 372 aa11.3□□□□□ -0.6
RARB-201ENST00000330688 ZSWIM4Q9H7M6 989 aa11.3□□□□□ -0.6
RARB-201ENST00000330688 SNED1Q8TER0 1413 aa11.3□□□□□ -0.6
RARB-201ENST00000330688 FLT1P17948 1338 aa11.3□□□□□ -0.6
RARB-201ENST00000330688 LAD1O00515 517 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 NAPAP54920 295 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 TXNRD1Q16881 649 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 LETM2Q2VYF4 491 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 TEX11Q8IYF3 940 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 GIMAP8Q8ND71 665 aaPredicted RBP11.29□□□□□ -0.6
RARB-201ENST00000330688 NEDD1Q8NHV4 660 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 TTF2Q9UNY4 1162 aaKnown RBP11.29□□□□□ -0.6
RARB-201ENST00000330688 BTAF1O14981 1849 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 TTC26A0AVF1 554 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 SMCO2A6NFE2 343 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 UFL1O94874 794 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 PLCG1P19174 1290 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 ARHGAP25P42331 645 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 RHBDL3P58872 404 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 TRIM14Q14142 442 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 CYP26C1Q6V0L0 522 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 SLC35F6Q8N357 371 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 MB21D1Q8N884 522 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 ZNF507Q8TCN5 953 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 RABGGTAQ92696 567 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 VAT1LQ9HCJ6 419 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 CCNT1O60563 726 aaKnown RBP11.29□□□□□ -0.6
RARB-201ENST00000330688 SASH3O75995 380 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 TFRCP02786 760 aaKnown RBP11.29□□□□□ -0.6
RARB-201ENST00000330688 TTI2Q6NXR4 508 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 CC2D1AQ6P1N0 951 aaPredicted RBP11.29□□□□□ -0.6
RARB-201ENST00000330688 CABP7Q86V35 215 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 GOLGA1Q92805 767 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 CEP95Q96GE4 821 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 SLF1Q9BQI6 1058 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 ZNF287Q9HBT7 754 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 CDC23Q9UJX2 597 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 SBF2Q86WG5 1849 aa11.29□□□□□ -0.6
RARB-201ENST00000330688 LGALS16A8MUM7 142 aa11.28□□□□□ -0.6
RARB-201ENST00000330688 KIF20AO95235 890 aa11.28□□□□□ -0.6
RARB-201ENST00000330688 TBC1D8O95759 1140 aa11.28□□□□□ -0.6
RARB-201ENST00000330688 MYL1P05976 194 aa11.28□□□□□ -0.6
RARB-201ENST00000330688 OR52Z1P0C646 297 aa11.28□□□□□ -0.6
RARB-201ENST00000330688 IL1R1P14778 569 aa11.28□□□□□ -0.6
RARB-201ENST00000330688 NONOQ15233 471 aaKnown RBP eCLIP11.28□□□□□ -0.6
RARB-201ENST00000330688 SRGAP1Q7Z6B7 1085 aa11.28□□□□□ -0.6
RARB-201ENST00000330688 FNBP4Q8N3X1 1017 aaPredicted RBP11.28□□□□□ -0.6
RARB-201ENST00000330688 EEF2KMTQ96G04 330 aa11.28□□□□□ -0.6
RARB-201ENST00000330688 DUSP9Q99956 384 aaKnown RBP11.28□□□□□ -0.6
RARB-201ENST00000330688 UBA5Q9GZZ9 404 aa11.28□□□□□ -0.6
RARB-201ENST00000330688 PUF60Q9UHX1 559 aaKnown RBP11.28□□□□□ -0.6
RARB-201ENST00000330688 ZNF771Q7L3S4 317 aaPredicted RBP11.28□□□□□ -0.6
RARB-201ENST00000330688 KRT25Q7Z3Z0 450 aa11.28□□□□□ -0.6
RARB-201ENST00000330688 RPGRQ92834 1020 aaKnown RBP11.28□□□□□ -0.6
RARB-201ENST00000330688 TRIM47Q96LD4 638 aa11.28□□□□□ -0.6
RARB-201ENST00000330688 PIGSQ96S52 555 aa11.28□□□□□ -0.6
RARB-201ENST00000330688 TRIM9Q9C026 710 aa11.28□□□□□ -0.6
RARB-201ENST00000330688 THAP9Q9H5L6 903 aa11.28□□□□□ -0.6
RARB-201ENST00000330688 LRRC4BQ9NT99 713 aa11.28□□□□□ -0.6
RARB-201ENST00000330688 REXO2Q9Y3B8 237 aaKnown RBP11.28□□□□□ -0.6
RARB-201ENST00000330688 PSMA7O14818 248 aa11.27□□□□□ -0.6
RARB-201ENST00000330688 TECP42680 631 aa11.27□□□□□ -0.6
RARB-201ENST00000330688 CHMP4BP1P59074 171 aa11.27□□□□□ -0.6
RARB-201ENST00000330688 KIF4BQ2VIQ3 1234 aa11.27□□□□□ -0.6
RARB-201ENST00000330688 RRP36Q96EU6 259 aaKnown RBP11.27□□□□□ -0.6
RARB-201ENST00000330688 AK8Q96MA6 479 aa11.27□□□□□ -0.6
RARB-201ENST00000330688 MMTAG2Q9BU76 263 aaKnown RBP11.27□□□□□ -0.6
RARB-201ENST00000330688 C6orf50Q9HD87 102 aa11.27□□□□□ -0.6
RARB-201ENST00000330688 USP17L5A8MUK1 530 aa11.27□□□□□ -0.61
RARB-201ENST00000330688 PES1O00541 588 aaKnown RBP11.27□□□□□ -0.61
RARB-201ENST00000330688 TOM1O60784 492 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms