RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 PTMAP06454 111 aaKnown RBP19.3■□□□□ 0.68
DDX41-201ENST00000330503 SARSP49591 514 aaKnown RBP19.3■□□□□ 0.68
DDX41-201ENST00000330503 NONOQ15233 471 aaKnown RBP eCLIP19.3■□□□□ 0.68
DDX41-201ENST00000330503 NT5DC1Q5TFE4 455 aa19.3■□□□□ 0.68
DDX41-201ENST00000330503 JAKMIP3Q5VZ66 844 aa19.3■□□□□ 0.68
DDX41-201ENST00000330503 CDAN1Q8IWY9 1227 aa19.3■□□□□ 0.68
DDX41-201ENST00000330503 JDP2Q8WYK2 163 aa19.3■□□□□ 0.68
DDX41-201ENST00000330503 DHX58Q96C10 678 aa19.3■□□□□ 0.68
DDX41-201ENST00000330503 PGAP2Q9UHJ9 254 aa19.3■□□□□ 0.68
DDX41-201ENST00000330503 F5H6K3 240 aa19.29■□□□□ 0.68
DDX41-201ENST00000330503 SLFN14P0C7P3 912 aa19.29■□□□□ 0.68
DDX41-201ENST00000330503 BMP6P22004 513 aa19.29■□□□□ 0.68
DDX41-201ENST00000330503 SLC1A4P43007 532 aa19.29■□□□□ 0.68
DDX41-201ENST00000330503 KLRC3Q07444 240 aa19.29■□□□□ 0.68
DDX41-201ENST00000330503 KANK3Q6NY19 840 aa19.29■□□□□ 0.68
DDX41-201ENST00000330503 SH3RF1Q7Z6J0 888 aa19.29■□□□□ 0.68
DDX41-201ENST00000330503 GMCL1P1Q8NEA9 526 aa19.29■□□□□ 0.68
DDX41-201ENST00000330503 VEZTQ9HBM0 779 aa19.29■□□□□ 0.68
DDX41-201ENST00000330503 HOOK1Q9UJC3 728 aaKnown RBP19.29■□□□□ 0.68
DDX41-201ENST00000330503 ZBTB5O15062 677 aa19.28■□□□□ 0.68
DDX41-201ENST00000330503 NBPF9Q3BBW0 867 aa19.28■□□□□ 0.68
DDX41-201ENST00000330503 SARM1Q6SZW1 724 aa19.28■□□□□ 0.68
DDX41-201ENST00000330503 REXO1Q8N1G1 1221 aaKnown RBP19.28■□□□□ 0.68
DDX41-201ENST00000330503 TMEM39BQ9GZU3 492 aa19.28■□□□□ 0.68
DDX41-201ENST00000330503 MAN1B1Q9UKM7 699 aa19.28■□□□□ 0.68
DDX41-201ENST00000330503 BCS1LQ9Y276 419 aa19.28■□□□□ 0.68
DDX41-201ENST00000330503 A0A1W2PRG0 241 aa19.28■□□□□ 0.68
DDX41-201ENST00000330503 WNT10BO00744 389 aa19.28■□□□□ 0.68
DDX41-201ENST00000330503 EDIL3O43854 480 aa19.28■□□□□ 0.68
DDX41-201ENST00000330503 RAD21O60216 631 aa19.28■□□□□ 0.68
DDX41-201ENST00000330503 LONP1P36776 959 aaKnown RBP19.28■□□□□ 0.68
DDX41-201ENST00000330503 PTGER2P43116 358 aa19.28■□□□□ 0.68
DDX41-201ENST00000330503 ADCY7P51828 1080 aa19.28■□□□□ 0.68
DDX41-201ENST00000330503 NCAPHQ15003 741 aa19.28■□□□□ 0.68
DDX41-201ENST00000330503 SPATA20Q8TB22 786 aa19.28■□□□□ 0.68
DDX41-201ENST00000330503 PAGE5Q96GU1 130 aa19.28■□□□□ 0.68
DDX41-201ENST00000330503 TRIM5Q9C035 493 aa19.28■□□□□ 0.68
DDX41-201ENST00000330503 NDUFB10O96000 172 aa19.27■□□□□ 0.68
DDX41-201ENST00000330503 PRELPP51888 382 aa19.27■□□□□ 0.68
DDX41-201ENST00000330503 E2F4Q16254 413 aa19.27■□□□□ 0.68
DDX41-201ENST00000330503 PPP1R18Q6NYC8 613 aa19.27■□□□□ 0.68
DDX41-201ENST00000330503 FAM83AQ86UY5 434 aa19.27■□□□□ 0.68
DDX41-201ENST00000330503 TBCKQ8TEA7 893 aa19.27■□□□□ 0.68
DDX41-201ENST00000330503 RIC8AQ9NPQ8 531 aa19.27■□□□□ 0.68
DDX41-201ENST00000330503 ZKSCAN5Q9Y2L8 839 aa19.27■□□□□ 0.68
DDX41-201ENST00000330503 TNIP1Q15025 636 aa19.27■□□□□ 0.67
DDX41-201ENST00000330503 LETM2Q2VYF4 491 aa19.27■□□□□ 0.67
DDX41-201ENST00000330503 GMCL1Q96IK5 515 aa19.27■□□□□ 0.67
DDX41-201ENST00000330503 NUP88Q99567 741 aaPredicted RBP19.27■□□□□ 0.67
DDX41-201ENST00000330503 MYOZ2Q9NPC6 264 aa19.27■□□□□ 0.67
DDX41-201ENST00000330503 TBC1D12O60347 775 aa19.26■□□□□ 0.67
DDX41-201ENST00000330503 DTHD1Q6ZMT9 781 aa19.26■□□□□ 0.67
DDX41-201ENST00000330503 NEK8Q86SG6 692 aa19.26■□□□□ 0.67
DDX41-201ENST00000330503 SPC24Q8NBT2 197 aa19.26■□□□□ 0.67
DDX41-201ENST00000330503 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.26■□□□□ 0.67
DDX41-201ENST00000330503 CDC25AP30304 524 aa19.25■□□□□ 0.67
DDX41-201ENST00000330503 CLCN1P35523 988 aa19.25■□□□□ 0.67
DDX41-201ENST00000330503 CLK2P49760 499 aaKnown RBP19.25■□□□□ 0.67
DDX41-201ENST00000330503 ZNF280AP59817 542 aaPredicted RBP19.25■□□□□ 0.67
DDX41-201ENST00000330503 MORC3Q14149 939 aa19.25■□□□□ 0.67
DDX41-201ENST00000330503 QRICH1Q2TAL8 776 aa19.25■□□□□ 0.67
DDX41-201ENST00000330503 ZNF830Q96NB3 372 aaPredicted RBP19.25■□□□□ 0.67
DDX41-201ENST00000330503 ARFGEF1Q9Y6D6 1849 aa19.25■□□□□ 0.67
DDX41-201ENST00000330503 PSDA5PKW4 1024 aaPredicted RBP19.25■□□□□ 0.67
DDX41-201ENST00000330503 LAD1O00515 517 aa19.25■□□□□ 0.67
DDX41-201ENST00000330503 CCNT1O60563 726 aaKnown RBP19.25■□□□□ 0.67
DDX41-201ENST00000330503 PRPHP41219 470 aa19.25■□□□□ 0.67
DDX41-201ENST00000330503 AFMP43652 599 aa19.25■□□□□ 0.67
DDX41-201ENST00000330503 SMARCE1Q969G3 411 aa19.25■□□□□ 0.67
DDX41-201ENST00000330503 LTBP3Q9NS15 1303 aa19.24■□□□□ 0.67
DDX41-201ENST00000330503 EGFRP00533 1210 aa19.24■□□□□ 0.67
DDX41-201ENST00000330503 RASSF7Q02833 373 aa19.24■□□□□ 0.67
DDX41-201ENST00000330503 UBE2SQ16763 222 aa19.24■□□□□ 0.67
DDX41-201ENST00000330503 KIAA1755Q5JYT7 1200 aa19.24■□□□□ 0.67
DDX41-201ENST00000330503 PDXDC2PQ6P474 469 aa19.24■□□□□ 0.67
DDX41-201ENST00000330503 MIGA2Q7L4E1 593 aa19.24■□□□□ 0.67
DDX41-201ENST00000330503 ACER1Q8TDN7 264 aa19.24■□□□□ 0.67
DDX41-201ENST00000330503 IKBKBO14920 756 aa19.24■□□□□ 0.67
DDX41-201ENST00000330503 MYO1BO43795 1136 aa19.24■□□□□ 0.67
DDX41-201ENST00000330503 ECE1P42892 770 aa19.24■□□□□ 0.67
DDX41-201ENST00000330503 MAP3K10Q02779 954 aa19.24■□□□□ 0.67
DDX41-201ENST00000330503 IQUBQ8NA54 791 aa19.24■□□□□ 0.67
DDX41-201ENST00000330503 HSD3B7Q9H2F3 369 aa19.24■□□□□ 0.67
DDX41-201ENST00000330503 PP2D1A8MPX8 630 aa19.23■□□□□ 0.67
DDX41-201ENST00000330503 SMTNL1A8MU46 457 aa19.23■□□□□ 0.67
DDX41-201ENST00000330503 BMP3P12645 472 aa19.23■□□□□ 0.67
DDX41-201ENST00000330503 CASP1P29466 404 aa19.23■□□□□ 0.67
DDX41-201ENST00000330503 DPYDQ12882 1025 aa19.23■□□□□ 0.67
DDX41-201ENST00000330503 CDC37Q16543 378 aaPredicted RBP19.23■□□□□ 0.67
DDX41-201ENST00000330503 BTNL9Q6UXG8 535 aa19.23■□□□□ 0.67
DDX41-201ENST00000330503 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.23■□□□□ 0.67
DDX41-201ENST00000330503 UPF1Q92900 1129 aaKnown RBP eCLIP19.23■□□□□ 0.67
DDX41-201ENST00000330503 MTRQ99707 1265 aa19.23■□□□□ 0.67
DDX41-201ENST00000330503 ZBTB21Q9ULJ3 1066 aa19.23■□□□□ 0.67
DDX41-201ENST00000330503 SYNPO2Q9UMS6 1093 aa19.23■□□□□ 0.67
DDX41-201ENST00000330503 SCAF8Q9UPN6 1271 aaKnown RBP19.23■□□□□ 0.67
DDX41-201ENST00000330503 TMEM232C9JQI7 657 aa19.22■□□□□ 0.67
DDX41-201ENST00000330503 CDC25BP30305 580 aa19.22■□□□□ 0.67
DDX41-201ENST00000330503 MRPL12P52815 198 aaKnown RBP19.22■□□□□ 0.67
DDX41-201ENST00000330503 SNAP25P60880 206 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms