RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 LRRC15Q8TF66 581 aa16.43■□□□□ 0.22
TPM3-206ENST00000330188 PIGSQ96S52 555 aa16.43■□□□□ 0.22
TPM3-206ENST00000330188 KLRC4O43908 158 aa16.43■□□□□ 0.22
TPM3-206ENST00000330188 GNA11P29992 359 aa16.43■□□□□ 0.22
TPM3-206ENST00000330188 CCT6AP40227 531 aaKnown RBP16.43■□□□□ 0.22
TPM3-206ENST00000330188 KCNB1Q14721 858 aa16.43■□□□□ 0.22
TPM3-206ENST00000330188 RASSF8Q8NHQ8 419 aa16.43■□□□□ 0.22
TPM3-206ENST00000330188 COA1Q9GZY4 146 aa16.43■□□□□ 0.22
TPM3-206ENST00000330188 RIOX1Q9H6W3 641 aa16.43■□□□□ 0.22
TPM3-206ENST00000330188 KBTBD4Q9NVX7 518 aa16.43■□□□□ 0.22
TPM3-206ENST00000330188 SEC63Q9UGP8 760 aaKnown RBP16.43■□□□□ 0.22
TPM3-206ENST00000330188 CCNT1O60563 726 aaKnown RBP16.42■□□□□ 0.22
TPM3-206ENST00000330188 MFAP3LO75121 409 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 OR52Z1P0C646 297 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 PDHBP11177 359 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 SPAG1Q07617 926 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 MTF1Q14872 753 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 LETM2Q2VYF4 491 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 TCP11X2Q5H9J9 407 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 ADSSL1Q8N142 457 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 VAT1LQ9HCJ6 419 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 ATP6V0A2Q9Y487 856 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 NRXN2Q9P2S2 1712 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 ADAMTSL1Q8N6G6 1762 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 SOWAHDA6NJG2 315 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 TRIM37O94972 964 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 GYPCP04921 128 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 MYL1P05976 194 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 COPB1P53618 953 aaKnown RBP16.42■□□□□ 0.22
TPM3-206ENST00000330188 PICALMQ13492 652 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 KMT5BQ4FZB7 885 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 SOGA3Q5TF21 947 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 NEK8Q86SG6 692 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 ZNF397Q8NF99 534 aaPredicted RBP16.42■□□□□ 0.22
TPM3-206ENST00000330188 CPLX3Q8WVH0 158 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 AK8Q96MA6 479 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 PLIN2Q99541 437 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 DESI2Q9BSY9 194 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 NAA15Q9BXJ9 866 aaKnown RBP16.42■□□□□ 0.22
TPM3-206ENST00000330188 UBA5Q9GZZ9 404 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 MTMR4Q9NYA4 1195 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 MAPK8IP1Q9UQF2 711 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 SUGT1Q9Y2Z0 365 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 EP400Q96L91 3159 aa16.42■□□□□ 0.22
TPM3-206ENST00000330188 IGKV6D-41A0A0C4DH26 115 aa16.41■□□□□ 0.22
TPM3-206ENST00000330188 ESYT2A0FGR8 921 aa16.41■□□□□ 0.22
TPM3-206ENST00000330188 KCNJ18B7U540 433 aa16.41■□□□□ 0.22
TPM3-206ENST00000330188 CASP14P31944 242 aa16.41■□□□□ 0.22
TPM3-206ENST00000330188 KCNJ12Q14500 433 aa16.41■□□□□ 0.22
TPM3-206ENST00000330188 RAD9BQ6WBX8 426 aa16.41■□□□□ 0.22
TPM3-206ENST00000330188 CABP7Q86V35 215 aa16.41■□□□□ 0.22
TPM3-206ENST00000330188 CERS5Q8N5B7 392 aa16.41■□□□□ 0.22
TPM3-206ENST00000330188 VPS16Q9H269 839 aa16.41■□□□□ 0.22
TPM3-206ENST00000330188 DDX4Q9NQI0 724 aaKnown RBP16.41■□□□□ 0.22
TPM3-206ENST00000330188 TAB2Q9NYJ8 693 aa16.41■□□□□ 0.22
TPM3-206ENST00000330188 PARP3Q9Y6F1 533 aa16.41■□□□□ 0.22
TPM3-206ENST00000330188 F8W031 263 aaPredicted RBP16.4■□□□□ 0.22
TPM3-206ENST00000330188 N4BP3O15049 544 aa16.4■□□□□ 0.22
TPM3-206ENST00000330188 RHOBTB3O94955 611 aa16.4■□□□□ 0.22
TPM3-206ENST00000330188 AKR1B1P15121 316 aa16.4■□□□□ 0.22
TPM3-206ENST00000330188 TXNRD1Q16881 649 aa16.4■□□□□ 0.22
TPM3-206ENST00000330188 PROM2Q8N271 834 aa16.4■□□□□ 0.22
TPM3-206ENST00000330188 FEZ1Q99689 392 aa16.4■□□□□ 0.22
TPM3-206ENST00000330188 CUEDC2Q9H467 287 aa16.4■□□□□ 0.22
TPM3-206ENST00000330188 QTRT2Q9H974 415 aaKnown RBP16.4■□□□□ 0.22
TPM3-206ENST00000330188 FRMPD2Q68DX3 1309 aaPredicted RBP16.4■□□□□ 0.22
TPM3-206ENST00000330188 SPDYE4A6NLX3 237 aa16.4■□□□□ 0.22
TPM3-206ENST00000330188 H7C1D1 291 aa16.4■□□□□ 0.22
TPM3-206ENST00000330188 hCG_1984214I3L0E3 225 aa16.4■□□□□ 0.22
TPM3-206ENST00000330188 URI1O94763 535 aaPredicted RBP16.4■□□□□ 0.22
TPM3-206ENST00000330188 PLCG1P19174 1290 aa16.4■□□□□ 0.22
TPM3-206ENST00000330188 FECHP22830 423 aa16.4■□□□□ 0.22
TPM3-206ENST00000330188 HSPA1LP34931 641 aa16.4■□□□□ 0.22
TPM3-206ENST00000330188 FXR1P51114 621 aaKnown RBP eCLIP16.4■□□□□ 0.22
TPM3-206ENST00000330188 CBX1P83916 185 aa16.4■□□□□ 0.22
TPM3-206ENST00000330188 SEMA3FQ13275 785 aa16.4■□□□□ 0.22
TPM3-206ENST00000330188 CNGA4Q8IV77 575 aa16.4■□□□□ 0.22
TPM3-206ENST00000330188 ZNF713Q8N859 430 aaPredicted RBP16.4■□□□□ 0.22
TPM3-206ENST00000330188 TBCKQ8TEA7 893 aa16.4■□□□□ 0.22
TPM3-206ENST00000330188 WDR24Q96S15 920 aa16.4■□□□□ 0.22
TPM3-206ENST00000330188 MAGEF1Q9HAY2 307 aa16.4■□□□□ 0.22
TPM3-206ENST00000330188 TRIM49BA6NDI0 452 aa16.39■□□□□ 0.21
TPM3-206ENST00000330188 SNHG28P0DPA3 235 aa16.39■□□□□ 0.21
TPM3-206ENST00000330188 GNG11P61952 73 aa16.39■□□□□ 0.21
TPM3-206ENST00000330188 ERCC6LQ2NKX8 1250 aa16.39■□□□□ 0.21
TPM3-206ENST00000330188 ASPRV1Q53RT3 343 aa16.39■□□□□ 0.21
TPM3-206ENST00000330188 JAKMIP3Q5VZ66 844 aa16.39■□□□□ 0.21
TPM3-206ENST00000330188 FBXO38Q6PIJ6 1188 aa16.39■□□□□ 0.21
TPM3-206ENST00000330188 IRF2BP1Q8IU81 584 aa16.39■□□□□ 0.21
TPM3-206ENST00000330188 REXO1Q8N1G1 1221 aaKnown RBP16.39■□□□□ 0.21
TPM3-206ENST00000330188 LRRC47Q8N1G4 583 aaKnown RBP16.39■□□□□ 0.21
TPM3-206ENST00000330188 ANKRD20A12PQ8NF67 263 aa16.39■□□□□ 0.21
TPM3-206ENST00000330188 CCDC51Q96ER9 411 aa16.39■□□□□ 0.21
TPM3-206ENST00000330188 SRRTQ9BXP5 876 aaKnown RBP16.39■□□□□ 0.21
TPM3-206ENST00000330188 MRPL44Q9H9J2 332 aaKnown RBP16.39■□□□□ 0.21
TPM3-206ENST00000330188 BIN2Q9UBW5 565 aaPredicted RBP16.39■□□□□ 0.21
TPM3-206ENST00000330188 ADGRG1Q9Y653 693 aa16.39■□□□□ 0.21
TPM3-206ENST00000330188 CCDC175P0C221 793 aa16.39■□□□□ 0.21
TPM3-206ENST00000330188 PMS1P54277 932 aaKnown RBP16.39■□□□□ 0.21
TPM3-206ENST00000330188 ORC2Q13416 577 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms