RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 SHANK2Q9UPX8 1470 aa16.92■□□□□ 0.3
PTPN21-201ENST00000328736 TLR3O15455 904 aaKnown RBP16.91■□□□□ 0.3
PTPN21-201ENST00000328736 PTH1RQ03431 593 aa16.91■□□□□ 0.3
PTPN21-201ENST00000328736 MFSD14BQ5SR56 506 aa16.91■□□□□ 0.3
PTPN21-201ENST00000328736 BLIDQ8IZY5 108 aa16.91■□□□□ 0.3
PTPN21-201ENST00000328736 ANKRD42Q8N9B4 389 aa16.91■□□□□ 0.3
PTPN21-201ENST00000328736 SLC17A8Q8NDX2 589 aa16.91■□□□□ 0.3
PTPN21-201ENST00000328736 NLRC4Q9NPP4 1024 aa16.91■□□□□ 0.3
PTPN21-201ENST00000328736 FAM8A1Q9UBU6 413 aa16.91■□□□□ 0.3
PTPN21-201ENST00000328736 ANAPC5Q9UJX4 755 aa16.91■□□□□ 0.3
PTPN21-201ENST00000328736 DDX27Q96GQ7 796 aaKnown RBP16.91■□□□□ 0.3
PTPN21-201ENST00000328736 PSMB7Q99436 277 aa16.91■□□□□ 0.3
PTPN21-201ENST00000328736 E7EWF7 191 aa16.91■□□□□ 0.3
PTPN21-201ENST00000328736 PTPREP23469 700 aa16.91■□□□□ 0.3
PTPN21-201ENST00000328736 PRR16Q569H4 304 aa16.91■□□□□ 0.3
PTPN21-201ENST00000328736 RUNDC3BQ96NL0 473 aa16.91■□□□□ 0.3
PTPN21-201ENST00000328736 CTSWP56202 376 aa16.91■□□□□ 0.3
PTPN21-201ENST00000328736 ME3Q16798 604 aa16.91■□□□□ 0.3
PTPN21-201ENST00000328736 FBXO11Q86XK2 927 aa16.91■□□□□ 0.3
PTPN21-201ENST00000328736 FAM71BQ8TC56 605 aa16.91■□□□□ 0.3
PTPN21-201ENST00000328736 RPS6KC1Q96S38 1066 aa16.91■□□□□ 0.3
PTPN21-201ENST00000328736 KCNJ18B7U540 433 aa16.91■□□□□ 0.3
PTPN21-201ENST00000328736 EIF4A1P60842 406 aaKnown RBP16.91■□□□□ 0.3
PTPN21-201ENST00000328736 KCNJ12Q14500 433 aa16.91■□□□□ 0.3
PTPN21-201ENST00000328736 WHAMMP3Q1A5X7 153 aa16.91■□□□□ 0.3
PTPN21-201ENST00000328736 ZNF654Q8IZM8 581 aa16.91■□□□□ 0.3
PTPN21-201ENST00000328736 ANKRD35Q8N283 1001 aa16.91■□□□□ 0.3
PTPN21-201ENST00000328736 MGARPQ8TDB4 240 aa16.91■□□□□ 0.3
PTPN21-201ENST00000328736 SERTAD1Q9UHV2 236 aa16.91■□□□□ 0.3
PTPN21-201ENST00000328736 TBX22Q9Y458 520 aa16.91■□□□□ 0.3
PTPN21-201ENST00000328736 GOLGA8QA0A0J9YX86 632 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 GOLGA8OA6NCC3 632 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 GOLGA8NF8WBI6 632 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 AOC3Q16853 763 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 PHLDB3Q6NSJ2 640 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 C4orf50Q6ZRC1 276 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 PNMA8AQ86V59 439 aaPredicted RBP16.9■□□□□ 0.3
PTPN21-201ENST00000328736 NCAPG2Q86XI2 1143 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 SDCCAG3Q96C92 435 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 ZNF496Q96IT1 587 aaPredicted RBP16.9■□□□□ 0.3
PTPN21-201ENST00000328736 METTL14Q9HCE5 456 aaKnown RBP16.9■□□□□ 0.3
PTPN21-201ENST00000328736 HOMER3Q9NSC5 361 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 USP21Q9UK80 565 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 IFNB1P01574 187 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 NME8Q8N427 588 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 CDKL2Q92772 493 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 KLHL14Q9P2G3 628 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 FAN1Q9Y2M0 1017 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 HYOU1Q9Y4L1 999 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 SAR1BQ9Y6B6 198 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 SORBS3O60504 671 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 SRGAP2BP0DMP2 458 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 CTNNA1P35221 906 aaKnown RBP16.9■□□□□ 0.3
PTPN21-201ENST00000328736 POLGP54098 1239 aaPredicted RBP16.9■□□□□ 0.3
PTPN21-201ENST00000328736 GPR162Q16538 588 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 DBN1Q16643 649 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 JADE1Q6IE81 842 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 ZNF449Q6P9G9 518 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 Q9H521 79 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 A6NJR5 290 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 RPS8P62241 208 aaKnown RBP16.9■□□□□ 0.3
PTPN21-201ENST00000328736 MORC3Q14149 939 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 CCDC93Q567U6 631 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 PCDHA12Q9UN75 941 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 ARHGAP42A6NI28 874 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 KRIT1O00522 736 aa16.9■□□□□ 0.3
PTPN21-201ENST00000328736 CERKLQ49MI3 558 aaPredicted RBP16.9■□□□□ 0.3
PTPN21-201ENST00000328736 DDX25Q9UHL0 483 aaKnown RBP16.9■□□□□ 0.3
PTPN21-201ENST00000328736 IFRD2Q12894 506 aaPredicted RBP16.89■□□□□ 0.29
PTPN21-201ENST00000328736 CCPG1Q9ULG6 757 aa16.89■□□□□ 0.29
PTPN21-201ENST00000328736 EIF3CLB5ME19 914 aaKnown RBP16.89■□□□□ 0.29
PTPN21-201ENST00000328736 ERVV-2B6SEH9 535 aa16.89■□□□□ 0.29
PTPN21-201ENST00000328736 XPAP23025 273 aaPredicted RBP16.89■□□□□ 0.29
PTPN21-201ENST00000328736 EIF3CQ99613 913 aaKnown RBP16.89■□□□□ 0.29
PTPN21-201ENST00000328736 ARMCX3Q9UH62 379 aaPredicted RBP16.89■□□□□ 0.29
PTPN21-201ENST00000328736 DDX41Q9UJV9 622 aaKnown RBP16.89■□□□□ 0.29
PTPN21-201ENST00000328736 COL4A3BPQ9Y5P4 624 aa16.89■□□□□ 0.29
PTPN21-201ENST00000328736 ABCB4P21439 1286 aa16.89■□□□□ 0.29
PTPN21-201ENST00000328736 PIK3CAP42336 1068 aa16.89■□□□□ 0.29
PTPN21-201ENST00000328736 ATP7AQ04656 1500 aa16.89■□□□□ 0.29
PTPN21-201ENST00000328736 ARMCX5Q6P1M9 558 aa16.89■□□□□ 0.29
PTPN21-201ENST00000328736 SESTD1Q86VW0 696 aa16.89■□□□□ 0.29
PTPN21-201ENST00000328736 PSPC1Q8WXF1 523 aaKnown RBP16.89■□□□□ 0.29
PTPN21-201ENST00000328736 BCS1LQ9Y276 419 aa16.89■□□□□ 0.29
PTPN21-201ENST00000328736 GOLGA8KD6RF30 607 aa16.88■□□□□ 0.29
PTPN21-201ENST00000328736 RAB44Q7Z6P3 723 aaPredicted RBP16.88■□□□□ 0.29
PTPN21-201ENST00000328736 FAM178BQ8IXR5 827 aa16.88■□□□□ 0.29
PTPN21-201ENST00000328736 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.88■□□□□ 0.29
PTPN21-201ENST00000328736 SKA2Q8WVK7 121 aaPredicted RBP16.88■□□□□ 0.29
PTPN21-201ENST00000328736 IFT122Q9HBG6 1241 aa16.88■□□□□ 0.29
PTPN21-201ENST00000328736 FRMPD2Q68DX3 1309 aaPredicted RBP16.88■□□□□ 0.29
PTPN21-201ENST00000328736 KCNK3O14649 394 aa16.88■□□□□ 0.29
PTPN21-201ENST00000328736 RNF8O76064 485 aa16.88■□□□□ 0.29
PTPN21-201ENST00000328736 ATP5JP18859 108 aa16.88■□□□□ 0.29
PTPN21-201ENST00000328736 TECP42680 631 aa16.88■□□□□ 0.29
PTPN21-201ENST00000328736 MAP7D3Q8IWC1 876 aa16.88■□□□□ 0.29
PTPN21-201ENST00000328736 SULF1Q8IWU6 871 aa16.88■□□□□ 0.29
PTPN21-201ENST00000328736 LMBRD1Q9NUN5 540 aa16.88■□□□□ 0.29
PTPN21-201ENST00000328736 NEURL1BA8MQ27 555 aa16.88■□□□□ 0.29
PTPN21-201ENST00000328736 DDAH1O94760 285 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms