RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 MKRN3Q13064 507 aaKnown RBP21.58■■□□□ 1.05
EXOSC3-201ENST00000327304 TREML2Q5T2D2 321 aa21.58■■□□□ 1.05
EXOSC3-201ENST00000327304 SAMD1Q6SPF0 538 aaPredicted RBP21.58■■□□□ 1.05
EXOSC3-201ENST00000327304 GADL1Q6ZQY3 521 aa21.58■■□□□ 1.05
EXOSC3-201ENST00000327304 FAM160B2Q86V87 743 aa21.58■■□□□ 1.05
EXOSC3-201ENST00000327304 CHURC1Q8WUH1 139 aa21.58■■□□□ 1.05
EXOSC3-201ENST00000327304 LEO1Q8WVC0 666 aaPredicted RBP21.58■■□□□ 1.05
EXOSC3-201ENST00000327304 GPKOWQ92917 476 aaPredicted RBP eCLIP21.58■■□□□ 1.05
EXOSC3-201ENST00000327304 KIFC2Q96AC6 838 aa21.58■■□□□ 1.05
EXOSC3-201ENST00000327304 MOGSQ13724 837 aa21.57■■□□□ 1.04
EXOSC3-201ENST00000327304 BRAPQ7Z569 592 aa21.57■■□□□ 1.04
EXOSC3-201ENST00000327304 TFIP11Q9UBB9 837 aaKnown RBP21.57■■□□□ 1.04
EXOSC3-201ENST00000327304 SEC63Q9UGP8 760 aaKnown RBP21.57■■□□□ 1.04
EXOSC3-201ENST00000327304 SNAPC2Q13487 334 aa21.57■■□□□ 1.04
EXOSC3-201ENST00000327304 CDC37Q16543 378 aaPredicted RBP21.57■■□□□ 1.04
EXOSC3-201ENST00000327304 SPRYD7Q5W111 196 aa21.57■■□□□ 1.04
EXOSC3-201ENST00000327304 SLF1Q9BQI6 1058 aa21.57■■□□□ 1.04
EXOSC3-201ENST00000327304 VPS54Q9P1Q0 977 aa21.57■■□□□ 1.04
EXOSC3-201ENST00000327304 TLL2Q9Y6L7 1015 aa21.57■■□□□ 1.04
EXOSC3-201ENST00000327304 PPP1R11O60927 126 aaPredicted RBP21.56■■□□□ 1.04
EXOSC3-201ENST00000327304 FLOT1O75955 427 aa21.56■■□□□ 1.04
EXOSC3-201ENST00000327304 MRE11P49959 708 aa21.56■■□□□ 1.04
EXOSC3-201ENST00000327304 QRICH1Q2TAL8 776 aa21.56■■□□□ 1.04
EXOSC3-201ENST00000327304 WWC2Q6AWC2 1192 aa21.56■■□□□ 1.04
EXOSC3-201ENST00000327304 HEATR3Q7Z4Q2 680 aa21.56■■□□□ 1.04
EXOSC3-201ENST00000327304 PROCA1Q8NCQ7 364 aaPredicted RBP21.56■■□□□ 1.04
EXOSC3-201ENST00000327304 PARP14Q460N5 1801 aa21.56■■□□□ 1.04
EXOSC3-201ENST00000327304 PNMA6FA0A0J9YX94 578 aa21.55■■□□□ 1.04
EXOSC3-201ENST00000327304 ZBTB5O15062 677 aa21.55■■□□□ 1.04
EXOSC3-201ENST00000327304 TRIM29Q14134 588 aa21.55■■□□□ 1.04
EXOSC3-201ENST00000327304 RASAL3Q86YV0 1011 aa21.55■■□□□ 1.04
EXOSC3-201ENST00000327304 TMEM88BA6NKF7 163 aa21.55■■□□□ 1.04
EXOSC3-201ENST00000327304 USP17L15C9J2P7 530 aa21.55■■□□□ 1.04
EXOSC3-201ENST00000327304 USP17L13C9JLJ4 530 aa21.55■■□□□ 1.04
EXOSC3-201ENST00000327304 USP17L11C9JVI0 530 aa21.55■■□□□ 1.04
EXOSC3-201ENST00000327304 USP17L18D6R9N7 530 aa21.55■■□□□ 1.04
EXOSC3-201ENST00000327304 USP17L22D6RA61 530 aa21.55■■□□□ 1.04
EXOSC3-201ENST00000327304 USP17L17D6RBQ6 530 aa21.55■■□□□ 1.04
EXOSC3-201ENST00000327304 USP17L19D6RCP7 530 aa21.55■■□□□ 1.04
EXOSC3-201ENST00000327304 USP17L20D6RJB6 530 aa21.55■■□□□ 1.04
EXOSC3-201ENST00000327304 ZNF157P51786 506 aaPredicted RBP21.55■■□□□ 1.04
EXOSC3-201ENST00000327304 USP17L24Q0WX57 530 aa21.55■■□□□ 1.04
EXOSC3-201ENST00000327304 KRT40Q6A162 431 aa21.55■■□□□ 1.04
EXOSC3-201ENST00000327304 TYW1BQ6NUM6 668 aa21.55■■□□□ 1.04
EXOSC3-201ENST00000327304 CATSPERGQ6ZRH7 1159 aa21.55■■□□□ 1.04
EXOSC3-201ENST00000327304 GAS2L3Q86XJ1 694 aa21.55■■□□□ 1.04
EXOSC3-201ENST00000327304 RCOR1Q9UKL0 485 aa21.55■■□□□ 1.04
EXOSC3-201ENST00000327304 PPP1R9AQ9ULJ8 1098 aa21.55■■□□□ 1.04
EXOSC3-201ENST00000327304 KCNJ14Q9UNX9 436 aa21.55■■□□□ 1.04
EXOSC3-201ENST00000327304 RLFQ13129 1914 aa21.54■■□□□ 1.04
EXOSC3-201ENST00000327304 STXBP3O00186 592 aa21.54■■□□□ 1.04
EXOSC3-201ENST00000327304 ZBTB48P10074 688 aaPredicted RBP21.54■■□□□ 1.04
EXOSC3-201ENST00000327304 KIF23Q02241 960 aaPredicted RBP21.54■■□□□ 1.04
EXOSC3-201ENST00000327304 RGMBQ6NW40 437 aa21.54■■□□□ 1.04
EXOSC3-201ENST00000327304 PRPF38AQ8NAV1 312 aaKnown RBP21.54■■□□□ 1.04
EXOSC3-201ENST00000327304 MS4A4AQ96JQ5 239 aa21.54■■□□□ 1.04
EXOSC3-201ENST00000327304 RANBP17Q9H2T7 1088 aaKnown RBP21.54■■□□□ 1.04
EXOSC3-201ENST00000327304 ABT1Q9ULW3 272 aaKnown RBP21.54■■□□□ 1.04
EXOSC3-201ENST00000327304 LETM1O95202 739 aaPredicted RBP21.53■■□□□ 1.04
EXOSC3-201ENST00000327304 CCDC183Q5T5S1 534 aa21.53■■□□□ 1.04
EXOSC3-201ENST00000327304 BARHL2Q9NY43 387 aa21.53■■□□□ 1.04
EXOSC3-201ENST00000327304 TAL1P17542 331 aaPredicted RBP21.52■■□□□ 1.04
EXOSC3-201ENST00000327304 GTF2A2P52657 109 aa21.52■■□□□ 1.04
EXOSC3-201ENST00000327304 GPAT2Q6NUI2 795 aa21.52■■□□□ 1.04
EXOSC3-201ENST00000327304 FASTKD5Q7L8L6 764 aaKnown RBP21.52■■□□□ 1.04
EXOSC3-201ENST00000327304 COA7Q96BR5 231 aa21.52■■□□□ 1.04
EXOSC3-201ENST00000327304 ATG4CQ96DT6 458 aa21.52■■□□□ 1.04
EXOSC3-201ENST00000327304 GRPEL1Q9HAV7 217 aa21.52■■□□□ 1.04
EXOSC3-201ENST00000327304 AGTPBP1Q9UPW5 1226 aa21.52■■□□□ 1.04
EXOSC3-201ENST00000327304 GOLGA6L4A6NEF3 574 aa21.52■■□□□ 1.04
EXOSC3-201ENST00000327304 CCDC174Q6PII3 467 aa21.52■■□□□ 1.04
EXOSC3-201ENST00000327304 LRSAM1Q6UWE0 723 aa21.52■■□□□ 1.04
EXOSC3-201ENST00000327304 USP28Q96RU2 1077 aa21.52■■□□□ 1.04
EXOSC3-201ENST00000327304 RTEL1Q9NZ71 1219 aa21.52■■□□□ 1.04
EXOSC3-201ENST00000327304 CCL15-CCL14A0A0B4J2E2 113 aa21.51■■□□□ 1.03
EXOSC3-201ENST00000327304 CETPP11597 493 aa21.51■■□□□ 1.03
EXOSC3-201ENST00000327304 XBP1P17861 261 aa21.51■■□□□ 1.03
EXOSC3-201ENST00000327304 HOXA7P31268 230 aaPredicted RBP21.51■■□□□ 1.03
EXOSC3-201ENST00000327304 DSG3P32926 999 aa21.51■■□□□ 1.03
EXOSC3-201ENST00000327304 COG2Q14746 738 aa21.51■■□□□ 1.03
EXOSC3-201ENST00000327304 CCL15Q16663 113 aa21.51■■□□□ 1.03
EXOSC3-201ENST00000327304 BRI3BPQ8WY22 251 aa21.51■■□□□ 1.03
EXOSC3-201ENST00000327304 PHF20Q9BVI0 1012 aa21.51■■□□□ 1.03
EXOSC3-201ENST00000327304 SH3GLB2Q9NR46 395 aa21.51■■□□□ 1.03
EXOSC3-201ENST00000327304 NAPAP54920 295 aa21.5■■□□□ 1.03
EXOSC3-201ENST00000327304 MYSM1Q5VVJ2 828 aa21.5■■□□□ 1.03
EXOSC3-201ENST00000327304 SLC38A10Q9HBR0 1119 aa21.5■■□□□ 1.03
EXOSC3-201ENST00000327304 SYCE3A1L190 88 aa21.5■■□□□ 1.03
EXOSC3-201ENST00000327304 SPDYE16A6NNV3 312 aaPredicted RBP21.5■■□□□ 1.03
EXOSC3-201ENST00000327304 hCG_1984214I3L0E3 225 aa21.5■■□□□ 1.03
EXOSC3-201ENST00000327304 MMP1P03956 469 aa21.5■■□□□ 1.03
EXOSC3-201ENST00000327304 SLC10A3P09131 477 aa21.5■■□□□ 1.03
EXOSC3-201ENST00000327304 U2AF2P26368 475 aaKnown RBP eCLIP21.5■■□□□ 1.035e-10■■■■■ 27.4
EXOSC3-201ENST00000327304 NPY5RQ15761 445 aa21.5■■□□□ 1.03
EXOSC3-201ENST00000327304 FBXO11Q86XK2 927 aa21.5■■□□□ 1.03
EXOSC3-201ENST00000327304 ZNF713Q8N859 430 aaPredicted RBP21.5■■□□□ 1.03
EXOSC3-201ENST00000327304 POLR3EQ9NVU0 708 aa21.5■■□□□ 1.03
EXOSC3-201ENST00000327304 KIF28PB7ZC32 967 aa21.49■■□□□ 1.03
EXOSC3-201ENST00000327304 VWA5AO00534 786 aa21.49■■□□□ 1.03
EXOSC3-201ENST00000327304 ADAMTS3O15072 1205 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms